RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 ARHGEF40Q8TER5 1519 aa17.83■□□□□ 0.45
PDLIM2-201ENST00000265810 C8orf58Q8NAV2 365 aa17.83■□□□□ 0.44
PDLIM2-201ENST00000265810 TPRNQ4KMQ1 711 aa17.83■□□□□ 0.44
PDLIM2-201ENST00000265810 PIK3R4Q99570 1358 aa17.83■□□□□ 0.44
PDLIM2-201ENST00000265810 SYNMO15061 1565 aa17.83■□□□□ 0.44
PDLIM2-201ENST00000265810 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-201ENST00000265810 AKAP4Q5JQC9 854 aa17.82■□□□□ 0.44
PDLIM2-201ENST00000265810 SLKQ9H2G2 1235 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-201ENST00000265810 GCC1Q96CN9 775 aa17.81■□□□□ 0.44
PDLIM2-201ENST00000265810 BCORL1Q5H9F3 1711 aa17.8■□□□□ 0.44
PDLIM2-201ENST00000265810 NCLP19338 710 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-201ENST00000265810 FLIIQ13045 1269 aa17.8■□□□□ 0.44
PDLIM2-201ENST00000265810 KRT24Q2M2I5 525 aa17.8■□□□□ 0.44
PDLIM2-201ENST00000265810 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-201ENST00000265810 FMNL2Q96PY5 1086 aa17.8■□□□□ 0.44
PDLIM2-201ENST00000265810 DBF4Q9UBU7 674 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-201ENST00000265810 SLC39A6Q13433 755 aa17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 NEUROD6Q96NK8 337 aa17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 HTATSF1O43719 755 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 STARD3NLO95772 234 aa17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 ANXA1P04083 346 aa17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 TSPYL6Q8N831 410 aa17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 FRMPD1Q5SYB0 1578 aa17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 CLASRPQ8N2M8 674 aaKnown RBP17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 DIAPH3Q9NSV4 1193 aa17.79■□□□□ 0.44
PDLIM2-201ENST00000265810 ATP7BP35670 1465 aa17.78■□□□□ 0.44
PDLIM2-201ENST00000265810 NBPF6Q5VWK0 638 aa17.78■□□□□ 0.44
PDLIM2-201ENST00000265810 NBPF4Q96M43 638 aa17.78■□□□□ 0.44
PDLIM2-201ENST00000265810 ZNF335Q9H4Z2 1342 aaPredicted RBP17.78■□□□□ 0.44
PDLIM2-201ENST00000265810 ANP32BQ92688 251 aaKnown RBP17.78■□□□□ 0.44
PDLIM2-201ENST00000265810 TRIM35Q9UPQ4 493 aa17.78■□□□□ 0.44
PDLIM2-201ENST00000265810 ZMYM4Q5VZL5 1548 aa17.77■□□□□ 0.44
PDLIM2-201ENST00000265810 SRGAP3O43295 1099 aa17.77■□□□□ 0.44
PDLIM2-201ENST00000265810 BTG4Q9NY30 223 aa17.77■□□□□ 0.44
PDLIM2-201ENST00000265810 USP6P35125 1406 aa17.77■□□□□ 0.43
PDLIM2-201ENST00000265810 C8orf37Q96NL8 207 aa17.77■□□□□ 0.43
PDLIM2-201ENST00000265810 IL2RBP14784 551 aa17.76■□□□□ 0.43
PDLIM2-201ENST00000265810 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
PDLIM2-201ENST00000265810 RPAP2Q8IXW5 612 aaPredicted RBP17.76■□□□□ 0.43
PDLIM2-201ENST00000265810 SIL1Q9H173 461 aa17.76■□□□□ 0.43
PDLIM2-201ENST00000265810 VAMP4O75379 141 aa17.75■□□□□ 0.43
PDLIM2-201ENST00000265810 NFATC2IPQ8NCF5 419 aa17.75■□□□□ 0.43
PDLIM2-201ENST00000265810 G3V3G9 751 aa17.75■□□□□ 0.43
PDLIM2-201ENST00000265810 DCAF8Q5TAQ9 597 aa17.75■□□□□ 0.43
PDLIM2-201ENST00000265810 SKAP1Q86WV1 359 aa17.75■□□□□ 0.43
PDLIM2-201ENST00000265810 DNAAF4Q8WXU2 420 aa17.75■□□□□ 0.43
PDLIM2-201ENST00000265810 MAP3K5Q99683 1374 aa17.75■□□□□ 0.43
PDLIM2-201ENST00000265810 ERC2O15083 957 aa17.74■□□□□ 0.43
PDLIM2-201ENST00000265810 SLC4A3P48751 1232 aa17.74■□□□□ 0.43
PDLIM2-201ENST00000265810 LARP1Q6PKG0 1096 aaKnown RBP17.74■□□□□ 0.43
PDLIM2-201ENST00000265810 NEXMIFQ5QGS0 1516 aa17.74■□□□□ 0.43
PDLIM2-201ENST00000265810 PTPRCP08575 1304 aa17.74■□□□□ 0.43
PDLIM2-201ENST00000265810 HYPKQ9NX55 129 aa17.74■□□□□ 0.43
PDLIM2-201ENST00000265810 TNNQ9UQP3 1299 aa17.73■□□□□ 0.43
PDLIM2-201ENST00000265810 ARHGEF10O15013 1369 aa17.73■□□□□ 0.43
PDLIM2-201ENST00000265810 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
PDLIM2-201ENST00000265810 REC8O95072 547 aa17.73■□□□□ 0.43
PDLIM2-201ENST00000265810 CHD1LQ86WJ1 897 aa17.73■□□□□ 0.43
PDLIM2-201ENST00000265810 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
PDLIM2-201ENST00000265810 MYD88Q99836 296 aa17.73■□□□□ 0.43
PDLIM2-201ENST00000265810 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
PDLIM2-201ENST00000265810 SNRPA1P09661 255 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 EXOC6BQ9Y2D4 811 aa17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 LRRCC1Q9C099 1032 aa17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 ANO2Q9NQ90 1003 aa17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 KAT6BQ8WYB5 2073 aa17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 BLMP54132 1417 aaPredicted RBP17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 PIK3C2BO00750 1634 aa17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 ZC3H13Q5T200 1668 aaKnown RBP17.72■□□□□ 0.43
PDLIM2-201ENST00000265810 VWDEQ8N2E2 1590 aa17.71■□□□□ 0.43
PDLIM2-201ENST00000265810 CHPF2Q9P2E5 772 aa17.71■□□□□ 0.43
PDLIM2-201ENST00000265810 AATKQ6ZMQ8 1374 aa17.71■□□□□ 0.43
PDLIM2-201ENST00000265810 INTS3Q68E01 1043 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-201ENST00000265810 MRPL50Q8N5N7 158 aaKnown RBP17.71■□□□□ 0.43
PDLIM2-201ENST00000265810 SETBP1Q9Y6X0 1596 aa17.71■□□□□ 0.43
PDLIM2-201ENST00000265810 RNMTO43148 476 aaKnown RBP17.71■□□□□ 0.42
PDLIM2-201ENST00000265810 LGR6Q9HBX8 967 aa17.7■□□□□ 0.42
PDLIM2-201ENST00000265810 IL1RAPL2Q9NP60 686 aa17.7■□□□□ 0.42
PDLIM2-201ENST00000265810 DDB1Q16531 1140 aa17.7■□□□□ 0.42
PDLIM2-201ENST00000265810 VPS37DQ86XT2 251 aa17.7■□□□□ 0.42
PDLIM2-201ENST00000265810 ARHGAP45Q92619 1136 aa17.7■□□□□ 0.42
PDLIM2-201ENST00000265810 CCDC85AQ96PX6 553 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-201ENST00000265810 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
PDLIM2-201ENST00000265810 ST18O60284 1047 aa17.69■□□□□ 0.42
PDLIM2-201ENST00000265810 CDC45O75419 566 aa17.69■□□□□ 0.42
PDLIM2-201ENST00000265810 ERC1Q8IUD2 1116 aa17.69■□□□□ 0.42
PDLIM2-201ENST00000265810 DCAF5Q96JK2 942 aa17.69■□□□□ 0.42
PDLIM2-201ENST00000265810 ZBTB3Q9H5J0 574 aa17.69■□□□□ 0.42
PDLIM2-201ENST00000265810 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
PDLIM2-201ENST00000265810 INSRP06213 1382 aa17.68■□□□□ 0.42
PDLIM2-201ENST00000265810 LRRFIP2Q9Y608 721 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-201ENST00000265810 RLBP1P12271 317 aa17.68■□□□□ 0.42
PDLIM2-201ENST00000265810 PREX1Q8TCU6 1659 aa17.68■□□□□ 0.42
PDLIM2-201ENST00000265810 DEPDC5O75140 1603 aa17.67■□□□□ 0.42
PDLIM2-201ENST00000265810 PIP4K2AP48426 406 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-201ENST00000265810 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-201ENST00000265810 CCDC57Q2TAC2 916 aa17.67■□□□□ 0.42
PDLIM2-201ENST00000265810 LRRFIP1Q32MZ4 808 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms