RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 KIAA1211Q6ZU35 1233 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 RIMS2Q9UQ26 1411 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 MED14O60244 1454 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 PTCH1Q13635 1447 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 NEK4P51957 841 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 NUCB2P80303 420 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 MPNDQ8N594 471 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 NUDT16Q96DE0 195 aaKnown RBP15.22■□□□□ 0.03
CHMP3-201ENST00000263856 ZSCAN23Q3MJ62 389 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 CEP85Q6P2H3 762 aa15.22■□□□□ 0.03
CHMP3-201ENST00000263856 RBM10P98175 930 aaKnown RBP15.21■□□□□ 0.03
CHMP3-201ENST00000263856 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
CHMP3-201ENST00000263856 ANKRD44Q8N8A2 993 aa15.2■□□□□ 0.02
CHMP3-201ENST00000263856 SYCE3A1L190 88 aa15.2■□□□□ 0.02
CHMP3-201ENST00000263856 PRIM1P49642 420 aaKnown RBP15.2■□□□□ 0.02
CHMP3-201ENST00000263856 WASLO00401 505 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-201ENST00000263856 FOXO3O43524 673 aa15.2■□□□□ 0.02
CHMP3-201ENST00000263856 RBSNQ9H1K0 784 aa15.19■□□□□ 0.02
CHMP3-201ENST00000263856 BRPF1P55201 1214 aaPredicted RBP15.19■□□□□ 0.02
CHMP3-201ENST00000263856 G2E3Q7L622 706 aa15.19■□□□□ 0.02
CHMP3-201ENST00000263856 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
CHMP3-201ENST00000263856 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
CHMP3-201ENST00000263856 REC8O95072 547 aa15.18■□□□□ 0.02
CHMP3-201ENST00000263856 HSP90AB2PQ58FF8 381 aa15.18■□□□□ 0.02
CHMP3-201ENST00000263856 ZSCAN30Q86W11 494 aa15.18■□□□□ 0.02
CHMP3-201ENST00000263856 LMBRD1Q9NUN5 540 aa15.18■□□□□ 0.02
CHMP3-201ENST00000263856 XPCQ01831 940 aaPredicted RBP15.18■□□□□ 0.02
CHMP3-201ENST00000263856 EIF4A2Q14240 407 aaKnown RBP15.18■□□□□ 0.02
CHMP3-201ENST00000263856 GDPD2Q9HCC8 539 aa15.18■□□□□ 0.02
CHMP3-201ENST00000263856 KIF20BQ96Q89 1820 aa15.18■□□□□ 0.02
CHMP3-201ENST00000263856 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
CHMP3-201ENST00000263856 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
CHMP3-201ENST00000263856 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
CHMP3-201ENST00000263856 NSFL1CQ9UNZ2 370 aaKnown RBP15.17■□□□□ 0.02
CHMP3-201ENST00000263856 ERC2O15083 957 aa15.17■□□□□ 0.02
CHMP3-201ENST00000263856 DTNBO60941 627 aa15.17■□□□□ 0.02
CHMP3-201ENST00000263856 RPAP2Q8IXW5 612 aaPredicted RBP15.17■□□□□ 0.02
CHMP3-201ENST00000263856 RTF1Q92541 710 aaKnown RBP15.17■□□□□ 0.02
CHMP3-201ENST00000263856 UPF3BQ9BZI7 483 aaKnown RBP15.17■□□□□ 0.02
CHMP3-201ENST00000263856 MAP4K4O95819 1239 aaPredicted RBP15.16■□□□□ 0.02
CHMP3-201ENST00000263856 PTMAP06454 111 aaKnown RBP15.16■□□□□ 0.02
CHMP3-201ENST00000263856 ARHGEF40Q8TER5 1519 aa15.16■□□□□ 0.02
CHMP3-201ENST00000263856 ALKQ9UM73 1620 aa15.16■□□□□ 0.02
CHMP3-201ENST00000263856 GPT2Q8TD30 523 aa15.16■□□□□ 0.02
CHMP3-201ENST00000263856 HMMRO75330 724 aa15.16■□□□□ 0.02
CHMP3-201ENST00000263856 PIK3R4Q99570 1358 aa15.16■□□□□ 0.02
CHMP3-201ENST00000263856 ESF1Q9H501 851 aaKnown RBP15.16■□□□□ 0.02
CHMP3-201ENST00000263856 ANKRD26Q9UPS8 1709 aa15.16■□□□□ 0.02
CHMP3-201ENST00000263856 CCDC61Q9Y6R9 512 aa15.15■□□□□ 0.02
CHMP3-201ENST00000263856 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
CHMP3-201ENST00000263856 LARP6Q9BRS8 491 aaKnown RBP15.15■□□□□ 0.02
CHMP3-201ENST00000263856 FAM13BQ9NYF5 915 aa15.14■□□□□ 0.01
CHMP3-201ENST00000263856 RTL1A6NKG5 1358 aa15.14■□□□□ 0.01
CHMP3-201ENST00000263856 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
CHMP3-201ENST00000263856 IL1RAPL2Q9NP60 686 aa15.14■□□□□ 0.01
CHMP3-201ENST00000263856 TMEM63CQ9P1W3 806 aa15.14■□□□□ 0.01
CHMP3-201ENST00000263856 PLCB2Q00722 1185 aa15.13■□□□□ 0.01
CHMP3-201ENST00000263856 RRP9O43818 475 aaKnown RBP15.13■□□□□ 0.01
CHMP3-201ENST00000263856 PDE1AP54750 535 aa15.13■□□□□ 0.01
CHMP3-201ENST00000263856 CYB5RLQ6IPT4 315 aa15.13■□□□□ 0.01
CHMP3-201ENST00000263856 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
CHMP3-201ENST00000263856 TMX3Q96JJ7 454 aa15.13■□□□□ 0.01
CHMP3-201ENST00000263856 DLG5Q8TDM6 1919 aa15.13■□□□□ 0.01
CHMP3-201ENST00000263856 ZDHHC9Q9Y397 364 aa15.12■□□□□ 0.01
CHMP3-201ENST00000263856 KNDC1Q76NI1 1749 aa15.12■□□□□ 0.01
CHMP3-201ENST00000263856 NUTM2GQ5VZR2 741 aa15.12■□□□□ 0.01
CHMP3-201ENST00000263856 STK31Q9BXU1 1019 aa15.12■□□□□ 0.01
CHMP3-201ENST00000263856 PALD1Q9ULE6 856 aa15.12■□□□□ 0.01
CHMP3-201ENST00000263856 EDC4Q6P2E9 1401 aaKnown RBP15.12■□□□□ 0.01
CHMP3-201ENST00000263856 CWC22Q9HCG8 908 aaKnown RBP15.12■□□□□ 0.01
CHMP3-201ENST00000263856 ATP10DQ9P241 1426 aa15.11■□□□□ 0.01
CHMP3-201ENST00000263856 TMEM131LA2VDJ0 1609 aa15.11■□□□□ 0.01
CHMP3-201ENST00000263856 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
CHMP3-201ENST00000263856 PPP1R9BQ96SB3 815 aa15.11■□□□□ 0.01
CHMP3-201ENST00000263856 MCCP23508 829 aa15.11■□□□□ 0.01
CHMP3-201ENST00000263856 METP08581 1390 aa15.1■□□□□ 0.01
CHMP3-201ENST00000263856 DNTTIP2Q5QJE6 756 aaKnown RBP15.1■□□□□ 0.01
CHMP3-201ENST00000263856 CPS1P31327 1500 aa15.1■□□□□ 0.01
CHMP3-201ENST00000263856 ZNF445P59923 1031 aa15.1■□□□□ 0.01
CHMP3-201ENST00000263856 CHL1O00533 1208 aa15.1■□□□□ 0.01
CHMP3-201ENST00000263856 GNAI2P04899 355 aa15.1■□□□□ 0.01
CHMP3-201ENST00000263856 NUTM1Q86Y26 1132 aa15.1■□□□□ 0.01
CHMP3-201ENST00000263856 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
CHMP3-201ENST00000263856 C14orf37Q86TY3 774 aa15.09■□□□□ 0.01
CHMP3-201ENST00000263856 ATP7BP35670 1465 aa15.09■□□□□ 0.01
CHMP3-201ENST00000263856 PNMA6EA0A0J9YXQ4 647 aa15.09■□□□□ 0.01
CHMP3-201ENST00000263856 FAM69CQ0P6D2 419 aa15.09■□□□□ 0.01
CHMP3-201ENST00000263856 ARHGAP31Q2M1Z3 1444 aa15.09■□□□□ 0.01
CHMP3-201ENST00000263856 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.09■□□□□ 0.01
CHMP3-201ENST00000263856 LRRCC1Q9C099 1032 aa15.09■□□□□ 0.01
CHMP3-201ENST00000263856 CYP2E1P05181 493 aaPredicted RBP15.08■□□□□ 0.01
CHMP3-201ENST00000263856 TPM2P07951 284 aa15.08■□□□□ 0.01
CHMP3-201ENST00000263856 AMPHP49418 695 aa15.08■□□□□ 0.01
CHMP3-201ENST00000263856 MTHFSDQ2M296 383 aaKnown RBP15.08■□□□□ 0.01
CHMP3-201ENST00000263856 CDK12Q9NYV4 1490 aaPredicted RBP15.08■□□□□ 0.01
CHMP3-201ENST00000263856 MX1P20591 662 aa15.08■□□□□ 0
CHMP3-201ENST00000263856 PTPRCP08575 1304 aa15.07■□□□□ 0
CHMP3-201ENST00000263856 ACEP12821 1306 aa15.07■□□□□ 0
CHMP3-201ENST00000263856 PRR36Q9H6K5 1346 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 386.1 ms