RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 CLEC17AQ6ZS10 378 aa21.47■■□□□ 1.03
TRAM1-201ENST00000262213 AEBP1Q8IUX7 1158 aa21.47■■□□□ 1.03
TRAM1-201ENST00000262213 RBSNQ9H1K0 784 aa21.47■■□□□ 1.03
TRAM1-201ENST00000262213 CASC1Q6TDU7 716 aa21.47■■□□□ 1.03
TRAM1-201ENST00000262213 ANKRD44Q8N8A2 993 aa21.47■■□□□ 1.03
TRAM1-201ENST00000262213 MCM10Q7L590 875 aa21.46■■□□□ 1.03
TRAM1-201ENST00000262213 MEIS3Q99687 375 aa21.46■■□□□ 1.03
TRAM1-201ENST00000262213 CLTCQ00610 1675 aaKnown RBP21.46■■□□□ 1.03
TRAM1-201ENST00000262213 ST18O60284 1047 aa21.46■■□□□ 1.03
TRAM1-201ENST00000262213 CEP85Q6P2H3 762 aa21.46■■□□□ 1.03
TRAM1-201ENST00000262213 PRIM1P49642 420 aaKnown RBP21.45■■□□□ 1.02
TRAM1-201ENST00000262213 NOL8Q76FK4 1167 aaKnown RBP21.45■■□□□ 1.02
TRAM1-201ENST00000262213 COG3Q96JB2 828 aa21.45■■□□□ 1.02
TRAM1-201ENST00000262213 YEATS2Q9ULM3 1422 aa21.45■■□□□ 1.02
TRAM1-201ENST00000262213 ALKQ9UM73 1620 aa21.45■■□□□ 1.02
TRAM1-201ENST00000262213 DLG5Q8TDM6 1919 aa21.45■■□□□ 1.02
TRAM1-201ENST00000262213 TMEM131LA2VDJ0 1609 aa21.44■■□□□ 1.02
TRAM1-201ENST00000262213 MSH6P52701 1360 aa21.44■■□□□ 1.02
TRAM1-201ENST00000262213 TSHZ3Q63HK5 1081 aa21.44■■□□□ 1.02
TRAM1-201ENST00000262213 SLC4A10Q6U841 1118 aa21.43■■□□□ 1.02
TRAM1-201ENST00000262213 ARHGAP31Q2M1Z3 1444 aa21.43■■□□□ 1.02
TRAM1-201ENST00000262213 CYP2E1P05181 493 aaPredicted RBP21.43■■□□□ 1.02
TRAM1-201ENST00000262213 SULT6B1Q6IMI4 303 aa21.43■■□□□ 1.02
TRAM1-201ENST00000262213 GPT2Q8TD30 523 aa21.43■■□□□ 1.02
TRAM1-201ENST00000262213 MIS18AQ9NYP9 233 aa21.43■■□□□ 1.02
TRAM1-201ENST00000262213 ZNF445P59923 1031 aa21.42■■□□□ 1.02
TRAM1-201ENST00000262213 SOX12O15370 315 aa21.42■■□□□ 1.02
TRAM1-201ENST00000262213 ZDHHC9Q9Y397 364 aa21.42■■□□□ 1.02
TRAM1-201ENST00000262213 TPM2P07951 284 aa21.41■■□□□ 1.02
TRAM1-201ENST00000262213 ATP10DQ9P241 1426 aa21.41■■□□□ 1.02
TRAM1-201ENST00000262213 RPAP2Q8IXW5 612 aaPredicted RBP21.41■■□□□ 1.02
TRAM1-201ENST00000262213 NSFL1CQ9UNZ2 370 aaKnown RBP21.41■■□□□ 1.02
TRAM1-201ENST00000262213 IBTKQ9P2D0 1353 aaPredicted RBP21.4■■□□□ 1.02
TRAM1-201ENST00000262213 FOXD4L6Q3SYB3 417 aaPredicted RBP21.4■■□□□ 1.02
TRAM1-201ENST00000262213 FOXD4L3Q6VB84 417 aaPredicted RBP21.4■■□□□ 1.02
TRAM1-201ENST00000262213 TXNDC2Q86VQ3 553 aa21.4■■□□□ 1.02
TRAM1-201ENST00000262213 SYCE3A1L190 88 aa21.4■■□□□ 1.02
TRAM1-201ENST00000262213 RBM10P98175 930 aaKnown RBP21.4■■□□□ 1.02
TRAM1-201ENST00000262213 F6X3S4 739 aa21.39■■□□□ 1.02
TRAM1-201ENST00000262213 REC8O95072 547 aa21.39■■□□□ 1.02
TRAM1-201ENST00000262213 CWC22Q9HCG8 908 aaKnown RBP21.39■■□□□ 1.02
TRAM1-201ENST00000262213 R3HCC1Q9Y3T6 440 aaKnown RBP21.39■■□□□ 1.02
TRAM1-201ENST00000262213 PREX1Q8TCU6 1659 aa21.39■■□□□ 1.01
TRAM1-201ENST00000262213 SLC4A2P04920 1241 aa21.39■■□□□ 1.01
TRAM1-201ENST00000262213 NEK4P51957 841 aa21.39■■□□□ 1.01
TRAM1-201ENST00000262213 RNF214Q8ND24 703 aa21.39■■□□□ 1.01
TRAM1-201ENST00000262213 RTL1A6NKG5 1358 aa21.39■■□□□ 1.01
TRAM1-201ENST00000262213 XPCQ01831 940 aaPredicted RBP21.38■■□□□ 1.01
TRAM1-201ENST00000262213 ATP7BP35670 1465 aa21.38■■□□□ 1.01
TRAM1-201ENST00000262213 WASLO00401 505 aaPredicted RBP21.38■■□□□ 1.01
TRAM1-201ENST00000262213 ERC2O15083 957 aa21.38■■□□□ 1.01
TRAM1-201ENST00000262213 NUDT16Q96DE0 195 aaKnown RBP21.37■■□□□ 1.01
TRAM1-201ENST00000262213 TMEM63CQ9P1W3 806 aa21.37■■□□□ 1.01
TRAM1-201ENST00000262213 OFD1O75665 1012 aa21.37■■□□□ 1.01
TRAM1-201ENST00000262213 CDK12Q9NYV4 1490 aaPredicted RBP21.37■■□□□ 1.01
TRAM1-201ENST00000262213 NUTM2FA1L443 756 aa21.36■■□□□ 1.01
TRAM1-201ENST00000262213 TPRNQ4KMQ1 711 aa21.36■■□□□ 1.01
TRAM1-201ENST00000262213 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.36■■□□□ 1.01
TRAM1-201ENST00000262213 EXOC6BQ9Y2D4 811 aa21.36■■□□□ 1.01
TRAM1-201ENST00000262213 REREQ9P2R6 1566 aa21.36■■□□□ 1.01
TRAM1-201ENST00000262213 EDC4Q6P2E9 1401 aaKnown RBP21.36■■□□□ 1.01
TRAM1-201ENST00000262213 RGS12O14924 1447 aa21.36■■□□□ 1.01
TRAM1-201ENST00000262213 ZBTB7CA1YPR0 619 aa21.36■■□□□ 1.01
TRAM1-201ENST00000262213 ZMYND15Q9H091 742 aa21.36■■□□□ 1.01
TRAM1-201ENST00000262213 KIF24Q5T7B8 1368 aa21.35■■□□□ 1.01
TRAM1-201ENST00000262213 EIF4A2Q14240 407 aaKnown RBP21.35■■□□□ 1.01
TRAM1-201ENST00000262213 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.35■■□□□ 1.01
TRAM1-201ENST00000262213 G2E3Q7L622 706 aa21.35■■□□□ 1.01
TRAM1-201ENST00000262213 MLECQ14165 292 aa21.34■■□□□ 1.01
TRAM1-201ENST00000262213 CPS1P31327 1500 aa21.34■■□□□ 1.01
TRAM1-201ENST00000262213 PDE1AP54750 535 aa21.33■■□□□ 1.01
TRAM1-201ENST00000262213 TMX3Q96JJ7 454 aa21.33■■□□□ 1.01
TRAM1-201ENST00000262213 CHL1O00533 1208 aa21.33■■□□□ 1
TRAM1-201ENST00000262213 RILPL2Q969X0 211 aa21.32■■□□□ 1
TRAM1-201ENST00000262213 CPSF1Q10570 1443 aaKnown RBP21.32■■□□□ 1
TRAM1-201ENST00000262213 HMMRO75330 724 aa21.31■■□□□ 1
TRAM1-201ENST00000262213 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.31■■□□□ 1
TRAM1-201ENST00000262213 TRIM6-TRIM34B2RNG4 842 aa21.31■■□□□ 1
TRAM1-201ENST00000262213 FOXO3O43524 673 aa21.31■■□□□ 1
TRAM1-201ENST00000262213 LRSAM1Q6UWE0 723 aa21.31■■□□□ 1
TRAM1-201ENST00000262213 NECTIN2Q92692 538 aa21.31■■□□□ 1
TRAM1-201ENST00000262213 FAM13BQ9NYF5 915 aa21.31■■□□□ 1
TRAM1-201ENST00000262213 PALD1Q9ULE6 856 aa21.31■■□□□ 1
TRAM1-201ENST00000262213 PKNOX2Q96KN3 472 aa21.3■■□□□ 1
TRAM1-201ENST00000262213 ARID3AQ99856 593 aa21.3■■□□□ 1
TRAM1-201ENST00000262213 ANO2Q9NQ90 1003 aa21.3■■□□□ 1
TRAM1-201ENST00000262213 NOL7Q9UMY1 257 aaKnown RBP21.3■■□□□ 1
TRAM1-201ENST00000262213 CCDC61Q9Y6R9 512 aa21.3■■□□□ 1
TRAM1-201ENST00000262213 AATKQ6ZMQ8 1374 aa21.3■■□□□ 1
TRAM1-201ENST00000262213 HSP90AB2PQ58FF8 381 aa21.3■■□□□ 1
TRAM1-201ENST00000262213 MPNDQ8N594 471 aa21.3■■□□□ 1
TRAM1-201ENST00000262213 GDPD2Q9HCC8 539 aa21.3■■□□□ 1
TRAM1-201ENST00000262213 PTPRCP08575 1304 aa21.29■■□□□ 1
TRAM1-201ENST00000262213 HAP1P54257 671 aaPredicted RBP21.29■■□□□ 1
TRAM1-201ENST00000262213 PDLIM2Q96JY6 352 aa21.29■■□□□ 1
TRAM1-201ENST00000262213 UPF3BQ9BZI7 483 aaKnown RBP21.28■■□□□ 1
TRAM1-201ENST00000262213 TSPYL4Q9UJ04 414 aa21.27■■□□□ 1
TRAM1-201ENST00000262213 METP08581 1390 aa21.26■□□□□ 0.99
TRAM1-201ENST00000262213 PTMAP06454 111 aaKnown RBP21.26■□□□□ 0.99
TRAM1-201ENST00000262213 ESYT1Q9BSJ8 1104 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms