RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 GTPBP4Q9BZE4 634 aaKnown RBP19.09■□□□□ 0.65
PRPF40B-201ENST00000261897 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
PRPF40B-201ENST00000261897 LUZP1Q86V48 1076 aa19.09■□□□□ 0.65
PRPF40B-201ENST00000261897 STK3Q13188 491 aa19.08■□□□□ 0.65
PRPF40B-201ENST00000261897 DNM1Q05193 864 aaKnown RBP19.08■□□□□ 0.64
PRPF40B-201ENST00000261897 ALDH1L2Q3SY69 923 aa19.08■□□□□ 0.64
PRPF40B-201ENST00000261897 DISP1Q96F81 1524 aa19.08■□□□□ 0.64
PRPF40B-201ENST00000261897 FKBP5Q13451 457 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 FAM184AQ8NB25 1140 aa19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 SRCIN1Q9C0H9 1055 aa19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 ZRSR1Q15695 479 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 TCEANC2Q96MN5 208 aa19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 FMNL2Q96PY5 1086 aa19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 CCDC9Q9Y3X0 531 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 GOLGA6L19H0YKK7 550 aa19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 SPG7Q9UQ90 795 aa19.07■□□□□ 0.64
PRPF40B-201ENST00000261897 CWC27Q6UX04 472 aaKnown RBP19.06■□□□□ 0.64
PRPF40B-201ENST00000261897 CCDC192P0DO97 292 aa19.06■□□□□ 0.64
PRPF40B-201ENST00000261897 BECN2A8MW95 431 aa19.06■□□□□ 0.64
PRPF40B-201ENST00000261897 CCAR2Q8N163 923 aaKnown RBP19.06■□□□□ 0.64
PRPF40B-201ENST00000261897 ABCC2Q92887 1545 aa19.06■□□□□ 0.64
PRPF40B-201ENST00000261897 POLR3GO15318 223 aaPredicted RBP19.05■□□□□ 0.64
PRPF40B-201ENST00000261897 KDM4AO75164 1064 aa19.05■□□□□ 0.64
PRPF40B-201ENST00000261897 CERS3Q8IU89 383 aa19.05■□□□□ 0.64
PRPF40B-201ENST00000261897 ABCC11Q96J66 1382 aa19.05■□□□□ 0.64
PRPF40B-201ENST00000261897 NECAB1Q8N987 351 aa19.05■□□□□ 0.64
PRPF40B-201ENST00000261897 KIF20AO95235 890 aa19.04■□□□□ 0.64
PRPF40B-201ENST00000261897 SKIDA1Q1XH10 827 aa19.04■□□□□ 0.64
PRPF40B-201ENST00000261897 TRPM1Q7Z4N2 1603 aa19.04■□□□□ 0.64
PRPF40B-201ENST00000261897 ATP10BO94823 1461 aa19.04■□□□□ 0.64
PRPF40B-201ENST00000261897 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
PRPF40B-201ENST00000261897 PRAM1Q96QH2 718 aa19.04■□□□□ 0.64
PRPF40B-201ENST00000261897 DCTPP1Q9H773 170 aa19.04■□□□□ 0.64
PRPF40B-201ENST00000261897 ATP6V1DQ9Y5K8 247 aa19.04■□□□□ 0.64
PRPF40B-201ENST00000261897 NFE2L2Q16236 605 aa19.03■□□□□ 0.64
PRPF40B-201ENST00000261897 FYB1O15117 783 aa19.03■□□□□ 0.64
PRPF40B-201ENST00000261897 MX1P20591 662 aa19.03■□□□□ 0.64
PRPF40B-201ENST00000261897 PDE1AP54750 535 aa19.03■□□□□ 0.64
PRPF40B-201ENST00000261897 FAM177A1Q8N128 213 aaPredicted RBP19.03■□□□□ 0.64
PRPF40B-201ENST00000261897 TNMDQ9H2S6 317 aa19.03■□□□□ 0.64
PRPF40B-201ENST00000261897 NRBP1Q9UHY1 535 aa19.03■□□□□ 0.64
PRPF40B-201ENST00000261897 GTF2F1P35269 517 aaKnown RBP eCLIP19.02■□□□□ 0.64
PRPF40B-201ENST00000261897 STK31Q9BXU1 1019 aa19.02■□□□□ 0.64
PRPF40B-201ENST00000261897 PRDM15P57071 1507 aaPredicted RBP19.02■□□□□ 0.64
PRPF40B-201ENST00000261897 CASTP20810 708 aaKnown RBP19.02■□□□□ 0.64
PRPF40B-201ENST00000261897 IBTKQ9P2D0 1353 aaPredicted RBP19.02■□□□□ 0.64
PRPF40B-201ENST00000261897 NCOA3Q9Y6Q9 1424 aa19.02■□□□□ 0.64
PRPF40B-201ENST00000261897 SYCP2Q9BX26 1530 aa19.02■□□□□ 0.64
PRPF40B-201ENST00000261897 BRD1O95696 1058 aa19.02■□□□□ 0.63
PRPF40B-201ENST00000261897 GNL2Q13823 731 aaKnown RBP19.02■□□□□ 0.63
PRPF40B-201ENST00000261897 HOMER1Q86YM7 354 aa19.02■□□□□ 0.63
PRPF40B-201ENST00000261897 STX6O43752 255 aa19.01■□□□□ 0.63
PRPF40B-201ENST00000261897 SURF6O75683 361 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-201ENST00000261897 MCM2P49736 904 aa19.01■□□□□ 0.63
PRPF40B-201ENST00000261897 HSP90B1P14625 803 aaKnown RBP19.01■□□□□ 0.63
PRPF40B-201ENST00000261897 ZRANB1Q9UGI0 708 aa19.01■□□□□ 0.63
PRPF40B-201ENST00000261897 NPC1L1Q9UHC9 1359 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 GTF3C6Q969F1 213 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 NUP62CLQ9H1M0 184 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 E9PCH4 1651 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 CEP85Q6P2H3 762 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 LRRCC1Q9C099 1032 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 CCDC66A2RUB6 948 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 FCHSD2O94868 740 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 UTP14CQ5TAP6 766 aaKnown RBP19■□□□□ 0.63
PRPF40B-201ENST00000261897 ESYT1Q9BSJ8 1104 aa19■□□□□ 0.63
PRPF40B-201ENST00000261897 SULT6B1Q6IMI4 303 aa18.99■□□□□ 0.63
PRPF40B-201ENST00000261897 NOS1P29475 1434 aa18.99■□□□□ 0.63
PRPF40B-201ENST00000261897 NUP160Q12769 1436 aa18.99■□□□□ 0.63
PRPF40B-201ENST00000261897 ZMYM3Q14202 1370 aa18.99■□□□□ 0.63
PRPF40B-201ENST00000261897 LARP1BQ659C4 914 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-201ENST00000261897 JAKMIP1Q96N16 626 aaKnown RBP18.99■□□□□ 0.63
PRPF40B-201ENST00000261897 PHF23Q9BUL5 403 aaPredicted RBP18.99■□□□□ 0.63
PRPF40B-201ENST00000261897 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 CYP2E1P05181 493 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 EIF2S2P20042 333 aaKnown RBP18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 SYT1P21579 422 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 RPAP2Q8IXW5 612 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 TMX1Q9H3N1 280 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 CLIP2Q9UDT6 1046 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 KIAA0556O60303 1618 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 SYNMO15061 1565 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 ANKRD44Q8N8A2 993 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 STAC3Q96MF2 364 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 GTF2E1P29083 439 aaPredicted RBP18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 UBE2HP62256 183 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 MAP3K11Q16584 847 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 ANO6Q4KMQ2 910 aa18.98■□□□□ 0.63
PRPF40B-201ENST00000261897 A0A087WWV3 80 aa18.97■□□□□ 0.63
PRPF40B-201ENST00000261897 GJB2P29033 226 aa18.97■□□□□ 0.63
PRPF40B-201ENST00000261897 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.97■□□□□ 0.63
PRPF40B-201ENST00000261897 ITSN2Q9NZM3 1697 aa18.97■□□□□ 0.63
PRPF40B-201ENST00000261897 ZSCAN22P10073 491 aaPredicted RBP18.97■□□□□ 0.63
PRPF40B-201ENST00000261897 C14orf37Q86TY3 774 aa18.97■□□□□ 0.63
PRPF40B-201ENST00000261897 LTV1Q96GA3 475 aaPredicted RBP18.97■□□□□ 0.63
PRPF40B-201ENST00000261897 TSPYL4Q9UJ04 414 aa18.97■□□□□ 0.63
PRPF40B-201ENST00000261897 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
PRPF40B-201ENST00000261897 DNAJC25Q9H1X3 360 aa18.96■□□□□ 0.63
PRPF40B-201ENST00000261897 ST7Q9NRC1 585 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms