RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 MED14O60244 1454 aa19.51■□□□□ 0.71
LMNB1-201ENST00000261366 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
LMNB1-201ENST00000261366 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
LMNB1-201ENST00000261366 GDPD2Q9HCC8 539 aa19.5■□□□□ 0.71
LMNB1-201ENST00000261366 NOL7Q9UMY1 257 aaKnown RBP19.5■□□□□ 0.71
LMNB1-201ENST00000261366 NEK4P51957 841 aa19.5■□□□□ 0.71
LMNB1-201ENST00000261366 RRS1Q15050 365 aaKnown RBP19.5■□□□□ 0.71
LMNB1-201ENST00000261366 DCTPP1Q9H773 170 aa19.5■□□□□ 0.71
LMNB1-201ENST00000261366 CYP2E1P05181 493 aaPredicted RBP19.5■□□□□ 0.71
LMNB1-201ENST00000261366 ARHGAP45Q92619 1136 aa19.5■□□□□ 0.71
LMNB1-201ENST00000261366 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
LMNB1-201ENST00000261366 JARID2Q92833 1246 aaPredicted RBP19.49■□□□□ 0.71
LMNB1-201ENST00000261366 CASC1Q6TDU7 716 aa19.49■□□□□ 0.71
LMNB1-201ENST00000261366 WAPLQ7Z5K2 1190 aa19.48■□□□□ 0.71
LMNB1-201ENST00000261366 IBTKQ9P2D0 1353 aaPredicted RBP19.48■□□□□ 0.71
LMNB1-201ENST00000261366 ZFYVE9O95405 1425 aa19.47■□□□□ 0.71
LMNB1-201ENST00000261366 IFT57Q9NWB7 429 aa19.47■□□□□ 0.71
LMNB1-201ENST00000261366 SLC4A10Q6U841 1118 aa19.47■□□□□ 0.71
LMNB1-201ENST00000261366 ZNF428Q96B54 188 aa19.47■□□□□ 0.71
LMNB1-201ENST00000261366 MEIS3Q99687 375 aa19.47■□□□□ 0.71
LMNB1-201ENST00000261366 PREX1Q8TCU6 1659 aa19.47■□□□□ 0.71
LMNB1-201ENST00000261366 DNTTIP2Q5QJE6 756 aaKnown RBP19.46■□□□□ 0.71
LMNB1-201ENST00000261366 NME9Q86XW9 330 aa19.46■□□□□ 0.71
LMNB1-201ENST00000261366 PUS7Q96PZ0 661 aaKnown RBP19.46■□□□□ 0.71
LMNB1-201ENST00000261366 PRDM10Q9NQV6 1147 aa19.46■□□□□ 0.71
LMNB1-201ENST00000261366 ZKSCAN5Q9Y2L8 839 aa19.46■□□□□ 0.71
LMNB1-201ENST00000261366 PTCH1Q13635 1447 aa19.46■□□□□ 0.71
LMNB1-201ENST00000261366 TMEM131LA2VDJ0 1609 aa19.46■□□□□ 0.71
LMNB1-201ENST00000261366 TSC1Q92574 1164 aa19.46■□□□□ 0.71
LMNB1-201ENST00000261366 ZNF830Q96NB3 372 aaPredicted RBP19.46■□□□□ 0.71
LMNB1-201ENST00000261366 BRPF1P55201 1214 aaPredicted RBP19.45■□□□□ 0.7
LMNB1-201ENST00000261366 LRSAM1Q6UWE0 723 aa19.45■□□□□ 0.7
LMNB1-201ENST00000261366 PDLIM2Q96JY6 352 aa19.45■□□□□ 0.7
LMNB1-201ENST00000261366 ESF1Q9H501 851 aaKnown RBP19.45■□□□□ 0.7
LMNB1-201ENST00000261366 MYO5BQ9ULV0 1848 aa19.45■□□□□ 0.7
LMNB1-201ENST00000261366 FAM135BQ49AJ0 1406 aa19.44■□□□□ 0.7
LMNB1-201ENST00000261366 CWC22Q9HCG8 908 aaKnown RBP19.44■□□□□ 0.7
LMNB1-201ENST00000261366 MIS18AQ9NYP9 233 aa19.44■□□□□ 0.7
LMNB1-201ENST00000261366 YTHDC2Q9H6S0 1430 aaKnown RBP19.44■□□□□ 0.7
LMNB1-201ENST00000261366 ARHGEF28Q8N1W1 1705 aaKnown RBP19.44■□□□□ 0.7
LMNB1-201ENST00000261366 DTNBO60941 627 aa19.44■□□□□ 0.7
LMNB1-201ENST00000261366 CEP85Q6P2H3 762 aa19.44■□□□□ 0.7
LMNB1-201ENST00000261366 CFAP44Q96MT7 982 aa19.44■□□□□ 0.7
LMNB1-201ENST00000261366 PNPLA6Q8IY17 1366 aa19.43■□□□□ 0.7
LMNB1-201ENST00000261366 SOX12O15370 315 aa19.43■□□□□ 0.7
LMNB1-201ENST00000261366 MCM10Q7L590 875 aa19.43■□□□□ 0.7
LMNB1-201ENST00000261366 TMX3Q96JJ7 454 aa19.43■□□□□ 0.7
LMNB1-201ENST00000261366 CD163L1Q9NR16 1453 aa19.43■□□□□ 0.7
LMNB1-201ENST00000261366 PIK3R4Q99570 1358 aa19.43■□□□□ 0.7
LMNB1-201ENST00000261366 NCKAP5LQ9HCH0 1330 aa19.43■□□□□ 0.7
LMNB1-201ENST00000261366 ZNF500O60304 480 aaPredicted RBP19.42■□□□□ 0.7
LMNB1-201ENST00000261366 REC8O95072 547 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 ANKRD44Q8N8A2 993 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 UPF3BQ9BZI7 483 aaKnown RBP19.42■□□□□ 0.7
LMNB1-201ENST00000261366 EXOC6BQ9Y2D4 811 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 FAM177BA6PVY3 158 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 F6X3S4 739 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 ERC2O15083 957 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 ZNF853P0CG23 659 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 AEBP1Q8IUX7 1158 aa19.42■□□□□ 0.7
LMNB1-201ENST00000261366 PLCB2Q00722 1185 aa19.41■□□□□ 0.7
LMNB1-201ENST00000261366 C17orf53Q8N3J3 647 aaPredicted RBP19.41■□□□□ 0.7
LMNB1-201ENST00000261366 MSH6P52701 1360 aa19.41■□□□□ 0.7
LMNB1-201ENST00000261366 RILPL2Q969X0 211 aa19.41■□□□□ 0.7
LMNB1-201ENST00000261366 PALD1Q9ULE6 856 aa19.4■□□□□ 0.7
LMNB1-201ENST00000261366 IL13P35225 146 aa19.4■□□□□ 0.7
LMNB1-201ENST00000261366 CCDC39Q9UFE4 941 aa19.4■□□□□ 0.7
LMNB1-201ENST00000261366 PTPRMP28827 1452 aa19.4■□□□□ 0.7
LMNB1-201ENST00000261366 TRIM6-TRIM34B2RNG4 842 aa19.39■□□□□ 0.7
LMNB1-201ENST00000261366 GADD45BO75293 160 aaPredicted RBP19.39■□□□□ 0.7
LMNB1-201ENST00000261366 HS1BP3Q53T59 392 aa19.39■□□□□ 0.7
LMNB1-201ENST00000261366 ANO2Q9NQ90 1003 aa19.39■□□□□ 0.7
LMNB1-201ENST00000261366 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.39■□□□□ 0.69
LMNB1-201ENST00000261366 LARP6Q9BRS8 491 aaKnown RBP19.39■□□□□ 0.69
LMNB1-201ENST00000261366 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.38■□□□□ 0.69
LMNB1-201ENST00000261366 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
LMNB1-201ENST00000261366 TSPY26PQ9H489 355 aa19.37■□□□□ 0.69
LMNB1-201ENST00000261366 CLTCQ00610 1675 aaKnown RBP19.37■□□□□ 0.69
LMNB1-201ENST00000261366 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
LMNB1-201ENST00000261366 A2ML1A8K2U0 1454 aa19.36■□□□□ 0.69
LMNB1-201ENST00000261366 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
LMNB1-201ENST00000261366 NECTIN2Q92692 538 aa19.36■□□□□ 0.69
LMNB1-201ENST00000261366 ALKQ9UM73 1620 aa19.36■□□□□ 0.69
LMNB1-201ENST00000261366 AGLP35573 1532 aa19.36■□□□□ 0.69
LMNB1-201ENST00000261366 RIMS2Q9UQ26 1411 aa19.36■□□□□ 0.69
LMNB1-201ENST00000261366 SULT6B1Q6IMI4 303 aa19.35■□□□□ 0.69
LMNB1-201ENST00000261366 USP25Q9UHP3 1055 aa19.35■□□□□ 0.69
LMNB1-201ENST00000261366 ATP10DQ9P241 1426 aa19.35■□□□□ 0.69
LMNB1-201ENST00000261366 PDE1AP54750 535 aa19.35■□□□□ 0.69
LMNB1-201ENST00000261366 CSPP1Q1MSJ5 1256 aa19.35■□□□□ 0.69
LMNB1-201ENST00000261366 RTL1A6NKG5 1358 aa19.34■□□□□ 0.69
LMNB1-201ENST00000261366 LMOD3Q0VAK6 560 aa19.34■□□□□ 0.69
LMNB1-201ENST00000261366 SASS6Q6UVJ0 657 aa19.34■□□□□ 0.69
LMNB1-201ENST00000261366 TTC12Q9H892 705 aaPredicted RBP19.34■□□□□ 0.69
LMNB1-201ENST00000261366 MBD3O95983 291 aa19.34■□□□□ 0.69
LMNB1-201ENST00000261366 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
LMNB1-201ENST00000261366 G2E3Q7L622 706 aa19.34■□□□□ 0.69
LMNB1-201ENST00000261366 TXNDC2Q86VQ3 553 aa19.34■□□□□ 0.69
LMNB1-201ENST00000261366 NUTM2FA1L443 756 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms