RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 LARP1Q6PKG0 1096 aaKnown RBP20.61■□□□□ 0.89
GYPC-201ENST00000259254 SALL2Q9Y467 1007 aaPredicted RBP20.6■□□□□ 0.89
GYPC-201ENST00000259254 APAF1O14727 1248 aa20.59■□□□□ 0.89
GYPC-201ENST00000259254 PLEKHF1Q96S99 279 aa20.59■□□□□ 0.89
GYPC-201ENST00000259254 RGPD5Q99666 1765 aa20.59■□□□□ 0.89
GYPC-201ENST00000259254 KDRP35968 1356 aa20.59■□□□□ 0.89
GYPC-201ENST00000259254 RGPD1P0DJD0 1748 aa20.58■□□□□ 0.89
GYPC-201ENST00000259254 TCP11L2Q8N4U5 519 aa20.58■□□□□ 0.89
GYPC-201ENST00000259254 CRB1P82279 1406 aa20.57■□□□□ 0.88
GYPC-201ENST00000259254 RAPGEF4Q8WZA2 1011 aa20.57■□□□□ 0.88
GYPC-201ENST00000259254 CARD10Q9BWT7 1032 aa20.57■□□□□ 0.88
GYPC-201ENST00000259254 USP35Q9P2H5 1018 aa20.57■□□□□ 0.88
GYPC-201ENST00000259254 RRP7AQ9Y3A4 280 aaKnown RBP20.57■□□□□ 0.88
GYPC-201ENST00000259254 PARP4Q9UKK3 1724 aaKnown RBP20.56■□□□□ 0.88
GYPC-201ENST00000259254 NEUROD2Q15784 382 aa20.56■□□□□ 0.88
GYPC-201ENST00000259254 PHACTR3Q96KR7 559 aa20.56■□□□□ 0.88
GYPC-201ENST00000259254 WNK3Q9BYP7 1800 aa20.55■□□□□ 0.88
GYPC-201ENST00000259254 TATP17735 454 aaPredicted RBP20.55■□□□□ 0.88
GYPC-201ENST00000259254 BARGINQ6ZT62 677 aa20.55■□□□□ 0.88
GYPC-201ENST00000259254 TNS1Q9HBL0 1735 aaKnown RBP20.55■□□□□ 0.88
GYPC-201ENST00000259254 NCAPD2Q15021 1401 aa20.54■□□□□ 0.88
GYPC-201ENST00000259254 SF3B2Q13435 895 aaKnown RBP20.54■□□□□ 0.88
GYPC-201ENST00000259254 FAM208AQ9UK61 1670 aaKnown RBP20.53■□□□□ 0.88
GYPC-201ENST00000259254 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
GYPC-201ENST00000259254 NFE2L2Q16236 605 aa20.52■□□□□ 0.88
GYPC-201ENST00000259254 THRAP3Q9Y2W1 955 aaKnown RBP20.52■□□□□ 0.88
GYPC-201ENST00000259254 PLEKHO1Q53GL0 409 aaPredicted RBP20.51■□□□□ 0.87
GYPC-201ENST00000259254 DEFB132Q7Z7B7 95 aa20.51■□□□□ 0.87
GYPC-201ENST00000259254 GAS2L2Q8NHY3 880 aa20.51■□□□□ 0.87
GYPC-201ENST00000259254 RIPK4P57078 832 aa20.5■□□□□ 0.87
GYPC-201ENST00000259254 MTHFSDQ2M296 383 aaKnown RBP20.5■□□□□ 0.87
GYPC-201ENST00000259254 FAM182BQ5T319 152 aa20.5■□□□□ 0.87
GYPC-201ENST00000259254 ZBED9Q6R2W3 1325 aa20.5■□□□□ 0.87
GYPC-201ENST00000259254 IL2RBP14784 551 aa20.49■□□□□ 0.87
GYPC-201ENST00000259254 AMOTQ4VCS5 1084 aa20.49■□□□□ 0.87
GYPC-201ENST00000259254 NGEFQ8N5V2 710 aa20.49■□□□□ 0.87
GYPC-201ENST00000259254 LRRC37A3O60309 1634 aa20.49■□□□□ 0.87
GYPC-201ENST00000259254 RGPD2P0DJD1 1756 aa20.48■□□□□ 0.87
GYPC-201ENST00000259254 MEGF6O75095 1541 aa20.48■□□□□ 0.87
GYPC-201ENST00000259254 ZNF530Q6P9A1 599 aaPredicted RBP20.47■□□□□ 0.87
GYPC-201ENST00000259254 SPG7Q9UQ90 795 aa20.47■□□□□ 0.87
GYPC-201ENST00000259254 BAG6P46379 1132 aa20.46■□□□□ 0.87
GYPC-201ENST00000259254 LMOD3Q0VAK6 560 aa20.46■□□□□ 0.87
GYPC-201ENST00000259254 PDE3BQ13370 1112 aa20.45■□□□□ 0.86
GYPC-201ENST00000259254 C1orf141Q5JVX7 400 aa20.45■□□□□ 0.86
GYPC-201ENST00000259254 FAM196AQ6ZSG2 479 aa20.45■□□□□ 0.86
GYPC-201ENST00000259254 OVOS2A0A0G2JMS6 1433 aa20.44■□□□□ 0.86
GYPC-201ENST00000259254 DISP2A7MBM2 1401 aa20.44■□□□□ 0.86
GYPC-201ENST00000259254 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
GYPC-201ENST00000259254 CCDC27Q2M243 656 aa20.43■□□□□ 0.86
GYPC-201ENST00000259254 NCBP3Q53F19 620 aaKnown RBP20.43■□□□□ 0.86
GYPC-201ENST00000259254 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
GYPC-201ENST00000259254 ZCRB1Q8TBF4 217 aaKnown RBP20.43■□□□□ 0.86
GYPC-201ENST00000259254 CDCA7Q9BWT1 371 aaPredicted RBP20.43■□□□□ 0.86
GYPC-201ENST00000259254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.43■□□□□ 0.86
GYPC-201ENST00000259254 PLEKHG2Q9H7P9 1386 aa20.43■□□□□ 0.86
GYPC-201ENST00000259254 GNAT3A8MTJ3 354 aa20.42■□□□□ 0.86
GYPC-201ENST00000259254 TRIM35Q9UPQ4 493 aa20.42■□□□□ 0.86
GYPC-201ENST00000259254 MAP3K5Q99683 1374 aa20.42■□□□□ 0.86
GYPC-201ENST00000259254 SBF2Q86WG5 1849 aa20.41■□□□□ 0.86
GYPC-201ENST00000259254 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
GYPC-201ENST00000259254 PCDH11XQ9BZA7 1347 aa20.39■□□□□ 0.85
GYPC-201ENST00000259254 PCDH11YQ9BZA8 1340 aa20.39■□□□□ 0.85
GYPC-201ENST00000259254 TRIM37O94972 964 aa20.39■□□□□ 0.85
GYPC-201ENST00000259254 EN1Q05925 392 aaPredicted RBP20.39■□□□□ 0.85
GYPC-201ENST00000259254 GOLGA2Q08379 1002 aa20.39■□□□□ 0.85
GYPC-201ENST00000259254 DCTN1Q14203 1278 aa20.39■□□□□ 0.85
GYPC-201ENST00000259254 MCM10Q7L590 875 aa20.39■□□□□ 0.85
GYPC-201ENST00000259254 IFNL2Q8IZJ0 200 aa20.39■□□□□ 0.85
GYPC-201ENST00000259254 DDX54Q8TDD1 881 aaKnown RBP20.39■□□□□ 0.85
GYPC-201ENST00000259254 THUMPD2Q9BTF0 503 aaKnown RBP20.39■□□□□ 0.85
GYPC-201ENST00000259254 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
GYPC-201ENST00000259254 EXOC5O00471 708 aa20.38■□□□□ 0.85
GYPC-201ENST00000259254 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
GYPC-201ENST00000259254 CALD1Q05682 793 aaKnown RBP20.38■□□□□ 0.85
GYPC-201ENST00000259254 RREB1Q92766 1687 aa20.38■□□□□ 0.85
GYPC-201ENST00000259254 CENPBP07199 599 aaPredicted RBP20.37■□□□□ 0.85
GYPC-201ENST00000259254 PHKG2P15735 406 aa20.37■□□□□ 0.85
GYPC-201ENST00000259254 DDB1Q16531 1140 aa20.37■□□□□ 0.85
GYPC-201ENST00000259254 WDR63Q8IWG1 891 aa20.37■□□□□ 0.85
GYPC-201ENST00000259254 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
GYPC-201ENST00000259254 CYP27B1O15528 508 aa20.35■□□□□ 0.85
GYPC-201ENST00000259254 CDCA7LQ96GN5 454 aa20.35■□□□□ 0.85
GYPC-201ENST00000259254 LAS1LQ9Y4W2 734 aaKnown RBP20.35■□□□□ 0.85
GYPC-201ENST00000259254 HSP90AB1P08238 724 aaKnown RBP20.34■□□□□ 0.85
GYPC-201ENST00000259254 RGPD3A6NKT7 1758 aaPredicted RBP20.34■□□□□ 0.85
GYPC-201ENST00000259254 RGPD4Q7Z3J3 1758 aa20.34■□□□□ 0.85
GYPC-201ENST00000259254 NUP188Q5SRE5 1749 aa20.33■□□□□ 0.85
GYPC-201ENST00000259254 E9PSI1 815 aa20.33■□□□□ 0.85
GYPC-201ENST00000259254 TNS2Q63HR2 1409 aa20.33■□□□□ 0.84
GYPC-201ENST00000259254 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
GYPC-201ENST00000259254 APBA3O96018 575 aa20.32■□□□□ 0.84
GYPC-201ENST00000259254 EZH2Q15910 746 aaKnown RBP20.32■□□□□ 0.84
GYPC-201ENST00000259254 IL17REQ8NFR9 667 aa20.32■□□□□ 0.84
GYPC-201ENST00000259254 CAMKK2Q96RR4 588 aa20.32■□□□□ 0.84
GYPC-201ENST00000259254 MYH16Q9H6N6 1097 aa20.32■□□□□ 0.84
GYPC-201ENST00000259254 LGR6Q9HBX8 967 aa20.32■□□□□ 0.84
GYPC-201ENST00000259254 IL16Q14005 1332 aa20.31■□□□□ 0.84
GYPC-201ENST00000259254 PKD1L3Q7Z443 1732 aa20.31■□□□□ 0.84
GYPC-201ENST00000259254 BCL9O00512 1426 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms