RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 HSPA1LP34931 641 aa23.22■■□□□ 1.31
IMP4-201ENST00000259239 EVA1CP58658 441 aa23.22■■□□□ 1.31
IMP4-201ENST00000259239 LARP1Q6PKG0 1096 aaKnown RBP23.22■■□□□ 1.31
IMP4-201ENST00000259239 MCM10Q7L590 875 aa23.21■■□□□ 1.31
IMP4-201ENST00000259239 RAPGEF4Q8WZA2 1011 aa23.21■■□□□ 1.31
IMP4-201ENST00000259239 MYH16Q9H6N6 1097 aa23.21■■□□□ 1.31
IMP4-201ENST00000259239 NWD2Q9ULI1 1742 aa23.21■■□□□ 1.31
IMP4-201ENST00000259239 MAP3K5Q99683 1374 aa23.21■■□□□ 1.31
IMP4-201ENST00000259239 CALD1Q05682 793 aaKnown RBP23.19■■□□□ 1.3
IMP4-201ENST00000259239 PLEKHO1Q53GL0 409 aaPredicted RBP23.19■■□□□ 1.3
IMP4-201ENST00000259239 TSR2Q969E8 191 aaKnown RBP23.19■■□□□ 1.3
IMP4-201ENST00000259239 FANCIQ9NVI1 1328 aa23.19■■□□□ 1.3
IMP4-201ENST00000259239 CRB1P82279 1406 aa23.19■■□□□ 1.3
IMP4-201ENST00000259239 GNAT3A8MTJ3 354 aa23.18■■□□□ 1.3
IMP4-201ENST00000259239 TATP17735 454 aaPredicted RBP23.18■■□□□ 1.3
IMP4-201ENST00000259239 AMOTQ4VCS5 1084 aa23.18■■□□□ 1.3
IMP4-201ENST00000259239 ZNF530Q6P9A1 599 aaPredicted RBP23.18■■□□□ 1.3
IMP4-201ENST00000259239 RTF1Q92541 710 aaKnown RBP23.18■■□□□ 1.3
IMP4-201ENST00000259239 CARD10Q9BWT7 1032 aa23.17■■□□□ 1.3
IMP4-201ENST00000259239 RCAN3Q9UKA8 241 aa23.17■■□□□ 1.3
IMP4-201ENST00000259239 LAS1LQ9Y4W2 734 aaKnown RBP23.17■■□□□ 1.3
IMP4-201ENST00000259239 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
IMP4-201ENST00000259239 WNK3Q9BYP7 1800 aa23.17■■□□□ 1.3
IMP4-201ENST00000259239 LRP6O75581 1613 aa23.16■■□□□ 1.3
IMP4-201ENST00000259239 OVOS2A0A0G2JMS6 1433 aa23.15■■□□□ 1.3
IMP4-201ENST00000259239 HTATSF1O43719 755 aaKnown RBP23.15■■□□□ 1.3
IMP4-201ENST00000259239 IFT57Q9NWB7 429 aa23.15■■□□□ 1.3
IMP4-201ENST00000259239 PLEKHG2Q9H7P9 1386 aa23.15■■□□□ 1.3
IMP4-201ENST00000259239 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.3
IMP4-201ENST00000259239 SHANK3Q9BYB0 1731 aa23.14■■□□□ 1.3
IMP4-201ENST00000259239 SLIT2O94813 1529 aa23.14■■□□□ 1.29
IMP4-201ENST00000259239 ZNF853P0CG23 659 aa23.13■■□□□ 1.29
IMP4-201ENST00000259239 GNAI1P63096 354 aa23.13■■□□□ 1.29
IMP4-201ENST00000259239 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
IMP4-201ENST00000259239 CFAP44Q96MT7 982 aa23.13■■□□□ 1.29
IMP4-201ENST00000259239 USP35Q9P2H5 1018 aa23.13■■□□□ 1.29
IMP4-201ENST00000259239 SCN11AQ9UI33 1791 aa23.12■■□□□ 1.29
IMP4-201ENST00000259239 C1orf141Q5JVX7 400 aa23.12■■□□□ 1.29
IMP4-201ENST00000259239 ADAMTS7Q9UKP4 1686 aa23.12■■□□□ 1.29
IMP4-201ENST00000259239 IL17REQ8NFR9 667 aa23.11■■□□□ 1.29
IMP4-201ENST00000259239 MBIPQ9NS73 344 aa23.11■■□□□ 1.29
IMP4-201ENST00000259239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.11■■□□□ 1.29
IMP4-201ENST00000259239 SPG7Q9UQ90 795 aa23.11■■□□□ 1.29
IMP4-201ENST00000259239 IL2RBP14784 551 aa23.1■■□□□ 1.29
IMP4-201ENST00000259239 EXOSC9Q06265 439 aaKnown RBP23.1■■□□□ 1.29
IMP4-201ENST00000259239 C8orf37Q96NL8 207 aa23.09■■□□□ 1.29
IMP4-201ENST00000259239 CEMIPQ8WUJ3 1361 aa23.09■■□□□ 1.29
IMP4-201ENST00000259239 RNF123Q5XPI4 1314 aa23.09■■□□□ 1.29
IMP4-201ENST00000259239 SIPA1L3O60292 1781 aaPredicted RBP23.08■■□□□ 1.29
IMP4-201ENST00000259239 NEFLP07196 543 aa23.08■■□□□ 1.28
IMP4-201ENST00000259239 MPRIPQ6WCQ1 1025 aa23.08■■□□□ 1.28
IMP4-201ENST00000259239 LGR6Q9HBX8 967 aa23.08■■□□□ 1.28
IMP4-201ENST00000259239 CHL1O00533 1208 aa23.06■■□□□ 1.28
IMP4-201ENST00000259239 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.06■■□□□ 1.28
IMP4-201ENST00000259239 DISP2A7MBM2 1401 aa23.05■■□□□ 1.28
IMP4-201ENST00000259239 PHKG2P15735 406 aa23.05■■□□□ 1.28
IMP4-201ENST00000259239 IRX6P78412 446 aaPredicted RBP23.05■■□□□ 1.28
IMP4-201ENST00000259239 NGLY1Q96IV0 654 aa23.05■■□□□ 1.28
IMP4-201ENST00000259239 KDM3BQ7LBC6 1761 aa23.05■■□□□ 1.28
IMP4-201ENST00000259239 CYP27B1O15528 508 aa23.05■■□□□ 1.28
IMP4-201ENST00000259239 RNMTO43148 476 aaKnown RBP23.05■■□□□ 1.28
IMP4-201ENST00000259239 RRP1P56182 461 aaKnown RBP23.05■■□□□ 1.28
IMP4-201ENST00000259239 MIS18AQ9NYP9 233 aa23.05■■□□□ 1.28
IMP4-201ENST00000259239 KDM6AO15550 1401 aaPredicted RBP23.04■■□□□ 1.28
IMP4-201ENST00000259239 IFNL2Q8IZJ0 200 aa23.04■■□□□ 1.28
IMP4-201ENST00000259239 ZCRB1Q8TBF4 217 aaKnown RBP23.04■■□□□ 1.28
IMP4-201ENST00000259239 BCL9LQ86UU0 1499 aa23.03■■□□□ 1.28
IMP4-201ENST00000259239 FKBP8Q14318 412 aa23.03■■□□□ 1.28
IMP4-201ENST00000259239 SPATA31A1Q5TZJ5 1347 aa23.03■■□□□ 1.28
IMP4-201ENST00000259239 PCDH11XQ9BZA7 1347 aa23.03■■□□□ 1.28
IMP4-201ENST00000259239 PCDH11YQ9BZA8 1340 aa23.03■■□□□ 1.28
IMP4-201ENST00000259239 TSPYL4Q9UJ04 414 aa23.02■■□□□ 1.28
IMP4-201ENST00000259239 CT47B1P0C2W7 299 aaPredicted RBP23.02■■□□□ 1.28
IMP4-201ENST00000259239 UNC5CLQ8IV45 518 aa23.02■■□□□ 1.28
IMP4-201ENST00000259239 TAF7Q15545 349 aaPredicted RBP23.01■■□□□ 1.27
IMP4-201ENST00000259239 MEX3CQ5U5Q3 659 aaKnown RBP23.01■■□□□ 1.27
IMP4-201ENST00000259239 BCAR3O75815 825 aa23■■□□□ 1.27
IMP4-201ENST00000259239 RARSP54136 660 aaKnown RBP23■■□□□ 1.27
IMP4-201ENST00000259239 TEFQ10587 303 aa23■■□□□ 1.27
IMP4-201ENST00000259239 SPATA31A5Q5VU36 1347 aa23■■□□□ 1.27
IMP4-201ENST00000259239 SPATA31A7Q8IWB4 1347 aa23■■□□□ 1.27
IMP4-201ENST00000259239 FNBP4Q8N3X1 1017 aaPredicted RBP22.99■■□□□ 1.27
IMP4-201ENST00000259239 TSPYL6Q8N831 410 aa22.99■■□□□ 1.27
IMP4-201ENST00000259239 CCDC9Q9Y3X0 531 aaKnown RBP22.99■■□□□ 1.27
IMP4-201ENST00000259239 PLIN1O60240 522 aa22.99■■□□□ 1.27
IMP4-201ENST00000259239 C8orf58Q8NAV2 365 aa22.99■■□□□ 1.27
IMP4-201ENST00000259239 MRC1P22897 1456 aa22.98■■□□□ 1.27
IMP4-201ENST00000259239 TOGARAM1Q9Y4F4 1720 aa22.97■■□□□ 1.27
IMP4-201ENST00000259239 ELL2O00472 640 aaPredicted RBP22.97■■□□□ 1.27
IMP4-201ENST00000259239 KRT24Q2M2I5 525 aa22.97■■□□□ 1.27
IMP4-201ENST00000259239 BCL2L13Q9BXK5 485 aa22.97■■□□□ 1.27
IMP4-201ENST00000259239 THRAP3Q9Y2W1 955 aaKnown RBP22.97■■□□□ 1.27
IMP4-201ENST00000259239 HSP90AB1P08238 724 aaKnown RBP22.96■■□□□ 1.27
IMP4-201ENST00000259239 TWISTNBQ3B726 338 aaPredicted RBP22.96■■□□□ 1.27
IMP4-201ENST00000259239 DDX54Q8TDD1 881 aaKnown RBP22.96■■□□□ 1.27
IMP4-201ENST00000259239 DCAF5Q96JK2 942 aa22.96■■□□□ 1.27
IMP4-201ENST00000259239 BABAM1Q9NWV8 329 aa22.96■■□□□ 1.27
IMP4-201ENST00000259239 USP21Q9UK80 565 aa22.96■■□□□ 1.27
IMP4-201ENST00000259239 TNS2Q63HR2 1409 aa22.95■■□□□ 1.27
IMP4-201ENST00000259239 VAMP4O75379 141 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms