RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 GCC1Q96CN9 775 aa17.02■□□□□ 0.31
LIMD2-201ENST00000259006 GLI2P10070 1586 aa17.01■□□□□ 0.31
LIMD2-201ENST00000259006 PRAM1Q96QH2 718 aa17.01■□□□□ 0.31
LIMD2-201ENST00000259006 PPP1R9BQ96SB3 815 aa17.01■□□□□ 0.31
LIMD2-201ENST00000259006 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
LIMD2-201ENST00000259006 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
LIMD2-201ENST00000259006 PLEKHM2Q8IWE5 1019 aa17.01■□□□□ 0.31
LIMD2-201ENST00000259006 CNPY4Q8N129 248 aa17.01■□□□□ 0.31
LIMD2-201ENST00000259006 MRPL50Q8N5N7 158 aaKnown RBP17.01■□□□□ 0.31
LIMD2-201ENST00000259006 GDPD2Q9HCC8 539 aa17■□□□□ 0.31
LIMD2-201ENST00000259006 LMBRD1Q9NUN5 540 aa17■□□□□ 0.31
LIMD2-201ENST00000259006 ANKRD36BQ8N2N9 1353 aa17■□□□□ 0.31
LIMD2-201ENST00000259006 MBIPQ9NS73 344 aa17■□□□□ 0.31
LIMD2-201ENST00000259006 KCNG1Q9UIX4 513 aa17■□□□□ 0.31
LIMD2-201ENST00000259006 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
LIMD2-201ENST00000259006 RICTORQ6R327 1708 aa17■□□□□ 0.31
LIMD2-201ENST00000259006 PPRC1Q5VV67 1664 aaKnown RBP17■□□□□ 0.31
LIMD2-201ENST00000259006 ZRANB1Q9UGI0 708 aa16.99■□□□□ 0.31
LIMD2-201ENST00000259006 TET3O43151 1660 aa16.99■□□□□ 0.31
LIMD2-201ENST00000259006 SOX12O15370 315 aa16.99■□□□□ 0.31
LIMD2-201ENST00000259006 GPT2Q8TD30 523 aa16.99■□□□□ 0.31
LIMD2-201ENST00000259006 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
LIMD2-201ENST00000259006 ABCC11Q96J66 1382 aa16.98■□□□□ 0.31
LIMD2-201ENST00000259006 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
LIMD2-201ENST00000259006 ABCC3O15438 1527 aa16.98■□□□□ 0.31
LIMD2-201ENST00000259006 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
LIMD2-201ENST00000259006 PLCB2Q00722 1185 aa16.97■□□□□ 0.31
LIMD2-201ENST00000259006 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
LIMD2-201ENST00000259006 ZNF710Q8N1W2 664 aa16.97■□□□□ 0.31
LIMD2-201ENST00000259006 TMEM63CQ9P1W3 806 aa16.97■□□□□ 0.31
LIMD2-201ENST00000259006 RABEP1Q15276 862 aa16.97■□□□□ 0.31
LIMD2-201ENST00000259006 SLC4A10Q6U841 1118 aa16.97■□□□□ 0.31
LIMD2-201ENST00000259006 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
LIMD2-201ENST00000259006 SDSP20132 328 aa16.96■□□□□ 0.31
LIMD2-201ENST00000259006 TRERF1Q96PN7 1200 aa16.96■□□□□ 0.31
LIMD2-201ENST00000259006 TRIM34Q9BYJ4 488 aa16.96■□□□□ 0.31
LIMD2-201ENST00000259006 DEPDC5O75140 1603 aa16.96■□□□□ 0.31
LIMD2-201ENST00000259006 ZNF500O60304 480 aaPredicted RBP16.96■□□□□ 0.31
LIMD2-201ENST00000259006 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
LIMD2-201ENST00000259006 NUCB2P80303 420 aa16.96■□□□□ 0.31
LIMD2-201ENST00000259006 CSPP1Q1MSJ5 1256 aa16.96■□□□□ 0.31
LIMD2-201ENST00000259006 USP26Q9BXU7 913 aa16.96■□□□□ 0.31
LIMD2-201ENST00000259006 NEK4P51957 841 aa16.95■□□□□ 0.3
LIMD2-201ENST00000259006 RRS1Q15050 365 aaKnown RBP16.95■□□□□ 0.3
LIMD2-201ENST00000259006 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.95■□□□□ 0.3
LIMD2-201ENST00000259006 NOL7Q9UMY1 257 aaKnown RBP16.95■□□□□ 0.3
LIMD2-201ENST00000259006 PTMSP20962 102 aa16.95■□□□□ 0.3
LIMD2-201ENST00000259006 SBNO2Q9Y2G9 1366 aa16.95■□□□□ 0.3
LIMD2-201ENST00000259006 APPP05067 770 aa16.95■□□□□ 0.3
LIMD2-201ENST00000259006 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
LIMD2-201ENST00000259006 VGFO15240 615 aaPredicted RBP16.94■□□□□ 0.3
LIMD2-201ENST00000259006 TTC22Q5TAA0 569 aa16.94■□□□□ 0.3
LIMD2-201ENST00000259006 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
LIMD2-201ENST00000259006 KIF13AQ9H1H9 1805 aa16.94■□□□□ 0.3
LIMD2-201ENST00000259006 DNAJC2Q99543 621 aaKnown RBP16.94■□□□□ 0.3
LIMD2-201ENST00000259006 ZDHHC9Q9Y397 364 aa16.94■□□□□ 0.3
LIMD2-201ENST00000259006 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
LIMD2-201ENST00000259006 ST18O60284 1047 aa16.93■□□□□ 0.3
LIMD2-201ENST00000259006 LARP6Q9BRS8 491 aaKnown RBP16.93■□□□□ 0.3
LIMD2-201ENST00000259006 CDK19Q9BWU1 502 aa16.93■□□□□ 0.3
LIMD2-201ENST00000259006 SLC52A1Q9NWF4 448 aa16.93■□□□□ 0.3
LIMD2-201ENST00000259006 HDAC5Q9UQL6 1122 aa16.93■□□□□ 0.3
LIMD2-201ENST00000259006 POLKQ9UBT6 870 aa16.93■□□□□ 0.3
LIMD2-201ENST00000259006 FCHSD2O94868 740 aa16.93■□□□□ 0.3
LIMD2-201ENST00000259006 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
LIMD2-201ENST00000259006 WAPLQ7Z5K2 1190 aa16.93■□□□□ 0.3
LIMD2-201ENST00000259006 C17orf53Q8N3J3 647 aaPredicted RBP16.93■□□□□ 0.3
LIMD2-201ENST00000259006 U2AF2P26368 475 aaKnown RBP eCLIP16.92■□□□□ 0.3
LIMD2-201ENST00000259006 NFE2L2Q16236 605 aa16.92■□□□□ 0.3
LIMD2-201ENST00000259006 DNAJC5Q9H3Z4 198 aa16.92■□□□□ 0.3
LIMD2-201ENST00000259006 IL16Q14005 1332 aa16.92■□□□□ 0.3
LIMD2-201ENST00000259006 MYOM2P54296 1465 aa16.92■□□□□ 0.3
LIMD2-201ENST00000259006 MROH2AA6NES4 1674 aa16.92■□□□□ 0.3
LIMD2-201ENST00000259006 ZNF445P59923 1031 aa16.91■□□□□ 0.3
LIMD2-201ENST00000259006 GNAI1P63096 354 aa16.91■□□□□ 0.3
LIMD2-201ENST00000259006 UPF3BQ9BZI7 483 aaKnown RBP16.91■□□□□ 0.3
LIMD2-201ENST00000259006 ZKSCAN5Q9Y2L8 839 aa16.91■□□□□ 0.3
LIMD2-201ENST00000259006 MEIS3Q99687 375 aa16.91■□□□□ 0.3
LIMD2-201ENST00000259006 NCKAP5LQ9HCH0 1330 aa16.91■□□□□ 0.3
LIMD2-201ENST00000259006 QRICH2Q9H0J4 1663 aa16.9■□□□□ 0.3
LIMD2-201ENST00000259006 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
LIMD2-201ENST00000259006 F6X3S4 739 aa16.9■□□□□ 0.3
LIMD2-201ENST00000259006 CASC1Q6TDU7 716 aa16.9■□□□□ 0.3
LIMD2-201ENST00000259006 RILPL2Q969X0 211 aa16.9■□□□□ 0.3
LIMD2-201ENST00000259006 KIF1BO60333 1816 aa16.89■□□□□ 0.3
LIMD2-201ENST00000259006 NUTM2FA1L443 756 aa16.89■□□□□ 0.3
LIMD2-201ENST00000259006 NME9Q86XW9 330 aa16.89■□□□□ 0.3
LIMD2-201ENST00000259006 EXOC6BQ9Y2D4 811 aa16.89■□□□□ 0.3
LIMD2-201ENST00000259006 MCM10Q7L590 875 aa16.89■□□□□ 0.29
LIMD2-201ENST00000259006 MYRIPQ8NFW9 859 aa16.89■□□□□ 0.29
LIMD2-201ENST00000259006 PDCL2Q8N4E4 241 aa16.88■□□□□ 0.29
LIMD2-201ENST00000259006 DCTPP1Q9H773 170 aa16.88■□□□□ 0.29
LIMD2-201ENST00000259006 API5Q9BZZ5 524 aaKnown RBP16.88■□□□□ 0.29
LIMD2-201ENST00000259006 TULP4Q9NRJ4 1543 aa16.87■□□□□ 0.29
LIMD2-201ENST00000259006 GADD45BO75293 160 aaPredicted RBP16.87■□□□□ 0.29
LIMD2-201ENST00000259006 TMX3Q96JJ7 454 aa16.87■□□□□ 0.29
LIMD2-201ENST00000259006 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
LIMD2-201ENST00000259006 LRSAM1Q6UWE0 723 aa16.86■□□□□ 0.29
LIMD2-201ENST00000259006 NSD2O96028 1365 aa16.86■□□□□ 0.29
LIMD2-201ENST00000259006 ERICH4A6NGS2 130 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms