RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 GOLGA6L9A6NEM1 432 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 PTPN14Q15678 1187 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 CCDC144AA2RUR9 1427 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 ANKRD18BA2A2Z9 1011 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 GCC1Q96CN9 775 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.63□□□□□ -0.87
DSG3-201ENST00000257189 V9GYY5 206 aaPredicted RBP9.63□□□□□ -0.87
DSG3-201ENST00000257189 ZPR1O75312 459 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 MCM4P33991 863 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 GPATCH11Q8N954 259 aa9.63□□□□□ -0.87
DSG3-201ENST00000257189 C9orf78Q9NZ63 289 aaPredicted RBP9.63□□□□□ -0.87
DSG3-201ENST00000257189 TRPC5Q9UL62 973 aaPredicted RBP9.63□□□□□ -0.87
DSG3-201ENST00000257189 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
DSG3-201ENST00000257189 C6orf163Q5TEZ5 329 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 CEP63Q96MT8 703 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 EPRSP07814 1512 aaKnown RBP9.62□□□□□ -0.87
DSG3-201ENST00000257189 YY1P25490 414 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 CFAP45Q9UL16 551 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 EPB41L2O43491 1005 aaKnown RBP9.62□□□□□ -0.87
DSG3-201ENST00000257189 CCDC175P0C221 793 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 DESP17661 470 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 CETN2P41208 172 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 SPC24Q8NBT2 197 aa9.62□□□□□ -0.87
DSG3-201ENST00000257189 ZSCAN31Q96LW9 406 aaPredicted RBP9.62□□□□□ -0.87
DSG3-201ENST00000257189 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
DSG3-201ENST00000257189 TUBB4AP04350 444 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 XPCQ01831 940 aaPredicted RBP9.61□□□□□ -0.87
DSG3-201ENST00000257189 ARHGAP29Q52LW3 1261 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 WDR66Q8TBY9 1149 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 FBXO3Q9UK99 471 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 PLIN1O60240 522 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 GNAI1P63096 354 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 SKIDA1Q1XH10 827 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 TICAM2Q86XR7 235 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 ERC1Q8IUD2 1116 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 CDK5RAP3Q96JB5 506 aa9.61□□□□□ -0.87
DSG3-201ENST00000257189 ZNF608Q9ULD9 1512 aaPredicted RBP9.61□□□□□ -0.87
DSG3-201ENST00000257189 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
DSG3-201ENST00000257189 TUBB4BP68371 445 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 SEPT6Q14141 434 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 PDE3AQ14432 1141 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 CNKSR2Q8WXI2 1034 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 SMARCC1Q92922 1105 aaPredicted RBP9.6□□□□□ -0.87
DSG3-201ENST00000257189 L3MBTL2Q969R5 705 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 STAC3Q96MF2 364 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 NUP62CLQ9H1M0 184 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 DAAM2Q86T65 1068 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 RUNDC1Q96C34 613 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 ZMYND15Q9H091 742 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 KIF5CO60282 957 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 LMOD1P29536 600 aaPredicted RBP9.6□□□□□ -0.87
DSG3-201ENST00000257189 FAM114A1Q8IWE2 563 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 MNAT1P51948 309 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 ZNF397Q8NF99 534 aaPredicted RBP9.6□□□□□ -0.87
DSG3-201ENST00000257189 DDX12PQ92771 950 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 PAIP2Q9BPZ3 127 aaKnown RBP9.6□□□□□ -0.87
DSG3-201ENST00000257189 PAXBP1Q9Y5B6 917 aa9.6□□□□□ -0.87
DSG3-201ENST00000257189 GSDMDP57764 484 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 CBX1P83916 185 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 BACH2Q9BYV9 841 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 LRRFIP2Q9Y608 721 aaKnown RBP9.59□□□□□ -0.87
DSG3-201ENST00000257189 SFPQP23246 707 aaKnown RBP eCLIP9.59□□□□□ -0.87
DSG3-201ENST00000257189 KIF6Q6ZMV9 814 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 KCNH5Q8NCM2 988 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 UPF3BQ9BZI7 483 aaKnown RBP9.59□□□□□ -0.87
DSG3-201ENST00000257189 BRD4O60885 1362 aaPredicted RBP9.59□□□□□ -0.87
DSG3-201ENST00000257189 FAM193AP78312 1265 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 NAA15Q9BXJ9 866 aaKnown RBP9.59□□□□□ -0.87
DSG3-201ENST00000257189 WDR7Q9Y4E6 1490 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 KRT222Q8N1A0 295 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 C19orf44Q9H6X5 657 aa9.59□□□□□ -0.87
DSG3-201ENST00000257189 MIA2Q96PC5 1412 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 CAVIN2O95810 425 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 CASQ1P31415 396 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 NEK4P51957 841 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 AMOTL2Q9Y2J4 779 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 FIBPO43427 364 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 GNAI3P08754 354 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 HSPA4P34932 840 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 KRT28Q7Z3Y7 464 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 TFCP2L1Q9NZI6 479 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 PLEKHH1Q9ULM0 1364 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 ZC3H6P61129 1189 aaKnown RBP9.58□□□□□ -0.88
DSG3-201ENST00000257189 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
DSG3-201ENST00000257189 MAP3K11Q16584 847 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 PLEKHO1Q53GL0 409 aaPredicted RBP9.58□□□□□ -0.88
DSG3-201ENST00000257189 RNF187Q5TA31 235 aaPredicted RBP9.58□□□□□ -0.88
DSG3-201ENST00000257189 LNPKQ9C0E8 428 aa9.58□□□□□ -0.88
DSG3-201ENST00000257189 APBA3O96018 575 aa9.57□□□□□ -0.88
DSG3-201ENST00000257189 PANK3Q9H999 370 aa9.57□□□□□ -0.88
DSG3-201ENST00000257189 MYOM3Q5VTT5 1437 aa9.57□□□□□ -0.88
DSG3-201ENST00000257189 HMGB1P09429 215 aaKnown RBP9.57□□□□□ -0.88
DSG3-201ENST00000257189 UVSSAQ2YD98 709 aa9.57□□□□□ -0.88
DSG3-201ENST00000257189 IPO4Q8TEX9 1081 aaKnown RBP9.57□□□□□ -0.88
DSG3-201ENST00000257189 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
DSG3-201ENST00000257189 SEPT11Q9NVA2 429 aaKnown RBP9.57□□□□□ -0.88
DSG3-201ENST00000257189 CTAGE5O15320 804 aa9.57□□□□□ -0.88
DSG3-201ENST00000257189 CDKL5O76039 1030 aa9.57□□□□□ -0.88
DSG3-201ENST00000257189 WWC2Q6AWC2 1192 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms