RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 SNW1Q13573 536 aaKnown RBP12.01□□□□□ -0.49
TRPM1-201ENST00000256552 FERMT3Q86UX7 667 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 IGF1RP08069 1367 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 TWISTNBQ3B726 338 aaPredicted RBP12□□□□□ -0.49
TRPM1-201ENST00000256552 HSP90AB4PQ58FF6 505 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 CPSF2Q9P2I0 782 aaKnown RBP12□□□□□ -0.49
TRPM1-201ENST00000256552 JAKMIP3Q5VZ66 844 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
TRPM1-201ENST00000256552 FILIP1LQ4L180 1135 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 RPAINQ86UA6 219 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 PPFIBP1Q86W92 1011 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 PDRG1Q9NUG6 133 aa12□□□□□ -0.49
TRPM1-201ENST00000256552 KIF3BO15066 747 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 ZSCAN12O43309 604 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 SETSIPP0DME0 302 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 AKAP17AQ02040 695 aaKnown RBP11.99□□□□□ -0.49
TRPM1-201ENST00000256552 BMP2KLQ5H9B9 411 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 CCDC186Q7Z3E2 898 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 GIMAP6Q6P9H5 292 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 CFTRP13569 1480 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 ERBINQ96RT1 1412 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 CCDC171Q6TFL3 1326 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 MAP4K4O95819 1239 aaPredicted RBP11.99□□□□□ -0.49
TRPM1-201ENST00000256552 CRACR2AQ9BSW2 395 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 NAIPQ13075 1403 aa11.99□□□□□ -0.49
TRPM1-201ENST00000256552 ZSCAN31Q96LW9 406 aaPredicted RBP11.99□□□□□ -0.49
TRPM1-201ENST00000256552 GBP6Q6ZN66 633 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 GAS2L2Q8NHY3 880 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 GGNBP2Q9H3C7 697 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 YY1AP1Q9H869 796 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 KIAA1107Q9UPP5 1409 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 SURF6O75683 361 aaKnown RBP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 ZSCAN20P17040 1043 aaPredicted RBP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 CLASRPQ8N2M8 674 aaKnown RBP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 PPM1EQ8WY54 764 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 TSC1Q92574 1164 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 PPP6R1Q9UPN7 881 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 PLEKHH1Q9ULM0 1364 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 ANKRD50Q9ULJ7 1429 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 UBTFL1P0CB47 393 aaPredicted RBP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 EZRP15311 586 aaKnown RBP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 TICAM2Q86XR7 235 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 GEMIN8Q9NWZ8 242 aaKnown RBP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 RGS22Q8NE09 1264 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 CFAP45Q9UL16 551 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
TRPM1-201ENST00000256552 PCDHB15Q9Y5E8 787 aa11.98□□□□□ -0.49
TRPM1-201ENST00000256552 RIOK3O14730 519 aaKnown RBP11.97□□□□□ -0.49
TRPM1-201ENST00000256552 KIAA1328Q86T90 577 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 CCDC83Q8IWF9 413 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
TRPM1-201ENST00000256552 CFAP100Q494V2 611 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 LOC102724159A0A0B4J2E5 919 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 PWP2Q15269 919 aaKnown RBP11.97□□□□□ -0.49
TRPM1-201ENST00000256552 JAKMIP1Q96N16 626 aaKnown RBP11.97□□□□□ -0.49
TRPM1-201ENST00000256552 UBE2HP62256 183 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 FSD1Q9BTV5 496 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 SLU7O95391 586 aaKnown RBP11.97□□□□□ -0.49
TRPM1-201ENST00000256552 ANKRD1Q15327 319 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 PIBF1Q8WXW3 757 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 CEP83Q9Y592 693 aa11.97□□□□□ -0.49
TRPM1-201ENST00000256552 RNF123Q5XPI4 1314 aa11.96□□□□□ -0.49
TRPM1-201ENST00000256552 ICE2Q659A1 982 aa11.96□□□□□ -0.49
TRPM1-201ENST00000256552 MYCNP04198 464 aaPredicted RBP11.96□□□□□ -0.49
TRPM1-201ENST00000256552 GNAI3P08754 354 aa11.96□□□□□ -0.49
TRPM1-201ENST00000256552 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.96□□□□□ -0.49
TRPM1-201ENST00000256552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRPM1-201ENST00000256552 GSDMDP57764 484 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 C17orf53Q8N3J3 647 aaPredicted RBP11.96□□□□□ -0.5
TRPM1-201ENST00000256552 SSH1Q8WYL5 1049 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 GTF3C6Q969F1 213 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 ANO10Q9NW15 660 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 KIF1CO43896 1103 aaKnown RBP11.96□□□□□ -0.5
TRPM1-201ENST00000256552 GNAI2P04899 355 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 CCDC172P0C7W6 258 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 HSP90AB2PQ58FF8 381 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 MICALL1Q8N3F8 863 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 ZBTB9Q96C00 473 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 COG3Q96JB2 828 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 FBXO3Q9UK99 471 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 SMARCA4P51532 1647 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 DHX29Q7Z478 1369 aaKnown RBP11.96□□□□□ -0.5
TRPM1-201ENST00000256552 SCAPERQ9BY12 1400 aa11.96□□□□□ -0.5
TRPM1-201ENST00000256552 ZBTB22O15209 634 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 SMARCC1Q92922 1105 aaPredicted RBP11.95□□□□□ -0.5
TRPM1-201ENST00000256552 CASTP20810 708 aaKnown RBP11.95□□□□□ -0.5
TRPM1-201ENST00000256552 ZNF165P49910 485 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 SAFBQ15424 915 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRPM1-201ENST00000256552 ARHGAP29Q52LW3 1261 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 ODF2Q5BJF6 829 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 RNF187Q5TA31 235 aaPredicted RBP11.95□□□□□ -0.5
TRPM1-201ENST00000256552 USP48Q86UV5 1035 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 FMNL3Q8IVF7 1028 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 TSPYL4Q9UJ04 414 aa11.95□□□□□ -0.5
TRPM1-201ENST00000256552 KDM2BQ8NHM5 1336 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms