RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 NFKBIBQ15653 356 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 SKOR2Q2VWA4 1001 aaPredicted RBP5.23□□□□□ -1.57
UBE4A-201ENST00000252108 HSCBQ8IWL3 235 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 MYH16Q9H6N6 1097 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 IFT57Q9NWB7 429 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 SBNO1A3KN83 1393 aa5.23□□□□□ -1.57
UBE4A-201ENST00000252108 CHL1O00533 1208 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 NFE2L2Q16236 605 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 GBP4Q96PP9 640 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 TTC21BQ7Z4L5 1316 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 NUTM2DQ5VT03 806 aaPredicted RBP5.22□□□□□ -1.57
UBE4A-201ENST00000252108 AK9Q5TCS8 1911 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 TMEM94Q12767 1356 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 GOLGA6L3A6NEY3 463 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 NUCB1Q02818 461 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 ATF7IPQ6VMQ6 1270 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.22□□□□□ -1.57
UBE4A-201ENST00000252108 ADGRL3Q9HAR2 1447 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 ARFGEF2Q9Y6D5 1785 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 CLEC17AQ6ZS10 378 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 EMILIN1Q9Y6C2 1016 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 MINK1Q8N4C8 1332 aaPredicted RBP5.22□□□□□ -1.57
UBE4A-201ENST00000252108 EXOSC9Q06265 439 aaKnown RBP5.22□□□□□ -1.57
UBE4A-201ENST00000252108 CYB5RLQ6IPT4 315 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 NME9Q86XW9 330 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 TSPYL6Q8N831 410 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 TSR2Q969E8 191 aaKnown RBP5.22□□□□□ -1.57
UBE4A-201ENST00000252108 TERF2IPQ9NYB0 399 aa5.22□□□□□ -1.57
UBE4A-201ENST00000252108 FBLN1P23142 703 aa5.21□□□□□ -1.57
UBE4A-201ENST00000252108 NUDT16Q96DE0 195 aaKnown RBP5.21□□□□□ -1.57
UBE4A-201ENST00000252108 CASZ1Q86V15 1759 aa5.21□□□□□ -1.58
UBE4A-201ENST00000252108 RGS3P49796 1198 aa5.21□□□□□ -1.58
UBE4A-201ENST00000252108 INTS3Q68E01 1043 aaKnown RBP5.21□□□□□ -1.58
UBE4A-201ENST00000252108 PXDNQ92626 1479 aa5.21□□□□□ -1.58
UBE4A-201ENST00000252108 COG6Q9Y2V7 657 aa5.21□□□□□ -1.58
UBE4A-201ENST00000252108 CCDC61Q9Y6R9 512 aa5.21□□□□□ -1.58
UBE4A-201ENST00000252108 IPO8O15397 1037 aaKnown RBP5.21□□□□□ -1.58
UBE4A-201ENST00000252108 MBIPQ9NS73 344 aa5.21□□□□□ -1.58
UBE4A-201ENST00000252108 RRP7AQ9Y3A4 280 aaKnown RBP5.21□□□□□ -1.58
UBE4A-201ENST00000252108 TTC21AQ8NDW8 1320 aa5.21□□□□□ -1.58
UBE4A-201ENST00000252108 CHGAP10645 457 aaKnown RBP5.21□□□□□ -1.58
UBE4A-201ENST00000252108 EIF4A2Q14240 407 aaKnown RBP5.21□□□□□ -1.58
UBE4A-201ENST00000252108 MEX3CQ5U5Q3 659 aaKnown RBP5.21□□□□□ -1.58
UBE4A-201ENST00000252108 FTSJ3Q8IY81 847 aaKnown RBP5.21□□□□□ -1.58
UBE4A-201ENST00000252108 PDZRN3Q9UPQ7 1066 aa5.2□□□□□ -1.58
UBE4A-201ENST00000252108 DIAPH1O60610 1272 aaKnown RBP5.2□□□□□ -1.58
UBE4A-201ENST00000252108 MYH15Q9Y2K3 1946 aa5.2□□□□□ -1.58
UBE4A-201ENST00000252108 CALD1Q05682 793 aaKnown RBP5.2□□□□□ -1.58
UBE4A-201ENST00000252108 A0A1B0GUL6 1792 aa5.2□□□□□ -1.58
UBE4A-201ENST00000252108 TMEM57Q8N5G2 664 aa5.2□□□□□ -1.58
UBE4A-201ENST00000252108 ARXQ96QS3 562 aa5.2□□□□□ -1.58
UBE4A-201ENST00000252108 CHMP5Q9NZZ3 219 aa5.2□□□□□ -1.58
UBE4A-201ENST00000252108 MAP3K19Q56UN5 1328 aa5.19□□□□□ -1.58
UBE4A-201ENST00000252108 CASC1Q6TDU7 716 aa5.19□□□□□ -1.58
UBE4A-201ENST00000252108 FLT4P35916 1363 aa5.19□□□□□ -1.58
UBE4A-201ENST00000252108 ACEP12821 1306 aa5.19□□□□□ -1.58
UBE4A-201ENST00000252108 ZKSCAN2Q63HK3 967 aa5.19□□□□□ -1.58
UBE4A-201ENST00000252108 DZIP1LQ8IYY4 767 aaKnown RBP5.19□□□□□ -1.58
UBE4A-201ENST00000252108 C8orf58Q8NAV2 365 aa5.19□□□□□ -1.58
UBE4A-201ENST00000252108 FSD2A1L4K1 749 aa5.19□□□□□ -1.58
UBE4A-201ENST00000252108 NOB1Q9ULX3 412 aaKnown RBP5.19□□□□□ -1.58
UBE4A-201ENST00000252108 MRE11P49959 708 aa5.18□□□□□ -1.58
UBE4A-201ENST00000252108 NAP1L5Q96NT1 182 aaPredicted RBP5.18□□□□□ -1.58
UBE4A-201ENST00000252108 CCDC9Q9Y3X0 531 aaKnown RBP5.18□□□□□ -1.58
UBE4A-201ENST00000252108 DCCP43146 1447 aa5.18□□□□□ -1.58
UBE4A-201ENST00000252108 ZNF831Q5JPB2 1677 aa5.18□□□□□ -1.58
UBE4A-201ENST00000252108 CYP2E1P05181 493 aaPredicted RBP5.18□□□□□ -1.58
UBE4A-201ENST00000252108 PRKAR2BP31323 418 aa5.18□□□□□ -1.58
UBE4A-201ENST00000252108 KLHL34Q8N239 644 aa5.18□□□□□ -1.58
UBE4A-201ENST00000252108 SNX21Q969T3 373 aa5.18□□□□□ -1.58
UBE4A-201ENST00000252108 OSBPL3Q9H4L5 887 aa5.18□□□□□ -1.58
UBE4A-201ENST00000252108 GSPT1P15170 499 aaKnown RBP5.18□□□□□ -1.58
UBE4A-201ENST00000252108 CIZ1Q9ULV3 898 aaPredicted RBP5.18□□□□□ -1.58
UBE4A-201ENST00000252108 ARAP2Q8WZ64 1704 aa5.18□□□□□ -1.58
UBE4A-201ENST00000252108 BMP2KLQ5H9B9 411 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 LAMA4Q16363 1823 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 HSP90AB1P08238 724 aaKnown RBP5.17□□□□□ -1.58
UBE4A-201ENST00000252108 AEBP1Q8IUX7 1158 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 RTN4Q9NQC3 1192 aaKnown RBP5.17□□□□□ -1.58
UBE4A-201ENST00000252108 LRP5O75197 1615 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 JCADQ9P266 1359 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 RIPK4P57078 832 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 TBC1D2Q9BYX2 928 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 U2AF1L5P0DN76 240 aaPredicted RBP5.17□□□□□ -1.58
UBE4A-201ENST00000252108 U2AF1Q01081 240 aaKnown RBP eCLIP5.17□□□□□ -1.58
UBE4A-201ENST00000252108 FRAT1Q92837 279 aaPredicted RBP5.17□□□□□ -1.58
UBE4A-201ENST00000252108 MAP7D2Q96T17 732 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 SOS1Q07889 1333 aaPredicted RBP5.17□□□□□ -1.58
UBE4A-201ENST00000252108 DCTPP1Q9H773 170 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 DDX19BQ9UMR2 479 aa5.17□□□□□ -1.58
UBE4A-201ENST00000252108 TXNDC2Q86VQ3 553 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 KCPQ6ZWJ8 1503 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 TPM2P07951 284 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 NCLP19338 710 aaKnown RBP5.16□□□□□ -1.58
UBE4A-201ENST00000252108 LRP10Q7Z4F1 713 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 HDGFL2Q7Z4V5 671 aaPredicted RBP5.16□□□□□ -1.58
UBE4A-201ENST00000252108 MTERF4Q7Z6M4 381 aaKnown RBP5.16□□□□□ -1.58
UBE4A-201ENST00000252108 IL27Q8NEV9 243 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 BABAM1Q9NWV8 329 aa5.16□□□□□ -1.58
UBE4A-201ENST00000252108 ANKRD36CQ5JPF3 1778 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms