RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MYOM1P52179 1685 aa14.6□□□□□ -0.07
VPS50-201ENST00000251739 QSER1Q2KHR3 1735 aa14.59□□□□□ -0.07
VPS50-201ENST00000251739 KCNQ2O43526 872 aa14.59□□□□□ -0.07
VPS50-201ENST00000251739 SPON1Q9HCB6 807 aa14.59□□□□□ -0.07
VPS50-201ENST00000251739 KIF20BQ96Q89 1820 aa14.59□□□□□ -0.07
VPS50-201ENST00000251739 ST20-MTHFSA0A0A6YYL1 179 aa14.58□□□□□ -0.08
VPS50-201ENST00000251739 ANKRD24Q8TF21 1146 aa14.58□□□□□ -0.08
VPS50-201ENST00000251739 NLRP2Q9NX02 1062 aa14.58□□□□□ -0.08
VPS50-201ENST00000251739 DOT1LQ8TEK3 1739 aa14.58□□□□□ -0.08
VPS50-201ENST00000251739 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
VPS50-201ENST00000251739 IL2RBP14784 551 aa14.57□□□□□ -0.08
VPS50-201ENST00000251739 TXNRD1Q16881 649 aa14.57□□□□□ -0.08
VPS50-201ENST00000251739 CHRDL2Q6WN34 429 aa14.57□□□□□ -0.08
VPS50-201ENST00000251739 PDGFDQ9GZP0 370 aaPredicted RBP14.57□□□□□ -0.08
VPS50-201ENST00000251739 ANKRD36BQ8N2N9 1353 aa14.57□□□□□ -0.08
VPS50-201ENST00000251739 COL24A1Q17RW2 1714 aa14.56□□□□□ -0.08
VPS50-201ENST00000251739 IP6K1Q92551 441 aa14.56□□□□□ -0.08
VPS50-201ENST00000251739 TUBGCP6Q96RT7 1819 aa14.56□□□□□ -0.08
VPS50-201ENST00000251739 LY75O60449 1722 aa14.55□□□□□ -0.08
VPS50-201ENST00000251739 MAP3K19Q56UN5 1328 aa14.55□□□□□ -0.08
VPS50-201ENST00000251739 RTL1A6NKG5 1358 aa14.55□□□□□ -0.08
VPS50-201ENST00000251739 USP47Q96K76 1375 aa14.55□□□□□ -0.08
VPS50-201ENST00000251739 SLC24A1O60721 1099 aa14.54□□□□□ -0.08
VPS50-201ENST00000251739 VASPP50552 380 aaPredicted RBP14.54□□□□□ -0.08
VPS50-201ENST00000251739 ANKRD26Q9UPS8 1709 aa14.53□□□□□ -0.08
VPS50-201ENST00000251739 MEGF6O75095 1541 aa14.53□□□□□ -0.08
VPS50-201ENST00000251739 PTGER2P43116 358 aa14.53□□□□□ -0.08
VPS50-201ENST00000251739 SLC15A2Q16348 729 aa14.53□□□□□ -0.08
VPS50-201ENST00000251739 ACSBG1Q96GR2 724 aa14.52□□□□□ -0.09
VPS50-201ENST00000251739 UTRNP46939 3433 aa14.52□□□□□ -0.09
VPS50-201ENST00000251739 HOXC9P31274 260 aa14.51□□□□□ -0.09
VPS50-201ENST00000251739 COG3Q96JB2 828 aa14.51□□□□□ -0.09
VPS50-201ENST00000251739 SGIP1Q9BQI5 828 aa14.51□□□□□ -0.09
VPS50-201ENST00000251739 STK32BQ9NY57 414 aa14.51□□□□□ -0.09
VPS50-201ENST00000251739 PPP1R1BQ9UD71 204 aaPredicted RBP14.51□□□□□ -0.09
VPS50-201ENST00000251739 NSD2O96028 1365 aa14.5□□□□□ -0.09
VPS50-201ENST00000251739 FYB1O15117 783 aa14.49□□□□□ -0.09
VPS50-201ENST00000251739 ZBTB7AO95365 584 aa14.49□□□□□ -0.09
VPS50-201ENST00000251739 FBLN1P23142 703 aa14.49□□□□□ -0.09
VPS50-201ENST00000251739 TRIM26Q12899 539 aaPredicted RBP14.49□□□□□ -0.09
VPS50-201ENST00000251739 LRRC4BQ9NT99 713 aa14.48□□□□□ -0.09
VPS50-201ENST00000251739 PKD1L3Q7Z443 1732 aa14.48□□□□□ -0.09
VPS50-201ENST00000251739 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.09
VPS50-201ENST00000251739 TMF1P82094 1093 aa14.47□□□□□ -0.09
VPS50-201ENST00000251739 ZNF827Q17R98 1081 aa14.47□□□□□ -0.09
VPS50-201ENST00000251739 LTV1Q96GA3 475 aaPredicted RBP14.47□□□□□ -0.09
VPS50-201ENST00000251739 MTFR1LQ9H019 292 aa14.47□□□□□ -0.09
VPS50-201ENST00000251739 CHD4Q14839 1912 aa14.47□□□□□ -0.09
VPS50-201ENST00000251739 KIF24Q5T7B8 1368 aa14.47□□□□□ -0.09
VPS50-201ENST00000251739 MAP3K5Q99683 1374 aa14.47□□□□□ -0.09
VPS50-201ENST00000251739 TOGARAM1Q9Y4F4 1720 aa14.46□□□□□ -0.09
VPS50-201ENST00000251739 AMPHP49418 695 aa14.46□□□□□ -0.09
VPS50-201ENST00000251739 NCAPD2Q15021 1401 aa14.46□□□□□ -0.09
VPS50-201ENST00000251739 INSRP06213 1382 aa14.46□□□□□ -0.1
VPS50-201ENST00000251739 TAF1LQ8IZX4 1826 aa14.45□□□□□ -0.1
VPS50-201ENST00000251739 RRS1Q15050 365 aaKnown RBP14.45□□□□□ -0.1
VPS50-201ENST00000251739 GGNBP2Q9H3C7 697 aa14.45□□□□□ -0.1
VPS50-201ENST00000251739 ITGB4P16144 1822 aa14.44□□□□□ -0.1
VPS50-201ENST00000251739 SLC27A3Q5K4L6 730 aa14.44□□□□□ -0.1
VPS50-201ENST00000251739 NBPF6Q5VWK0 638 aa14.44□□□□□ -0.1
VPS50-201ENST00000251739 DDX54Q8TDD1 881 aaKnown RBP14.44□□□□□ -0.1
VPS50-201ENST00000251739 NBPF4Q96M43 638 aa14.44□□□□□ -0.1
VPS50-201ENST00000251739 C5P01031 1676 aa14.44□□□□□ -0.1
VPS50-201ENST00000251739 FLT4P35916 1363 aa14.44□□□□□ -0.1
VPS50-201ENST00000251739 CGNL1Q0VF96 1302 aa14.43□□□□□ -0.1
VPS50-201ENST00000251739 MAP2P11137 1827 aaKnown RBP14.43□□□□□ -0.1
VPS50-201ENST00000251739 SMG6Q86US8 1419 aaKnown RBP14.43□□□□□ -0.1
VPS50-201ENST00000251739 YY1P25490 414 aa14.43□□□□□ -0.1
VPS50-201ENST00000251739 ZCRB1Q8TBF4 217 aaKnown RBP14.43□□□□□ -0.1
VPS50-201ENST00000251739 CREBZFQ9NS37 354 aa14.43□□□□□ -0.1
VPS50-201ENST00000251739 NSD3Q9BZ95 1437 aa14.42□□□□□ -0.1
VPS50-201ENST00000251739 CDCA8Q53HL2 280 aa14.42□□□□□ -0.1
VPS50-201ENST00000251739 MIER1Q8N108 512 aa14.42□□□□□ -0.1
VPS50-201ENST00000251739 CARD14Q9BXL6 1004 aa14.42□□□□□ -0.1
VPS50-201ENST00000251739 FHDC1Q9C0D6 1143 aaPredicted RBP14.42□□□□□ -0.1
VPS50-201ENST00000251739 PRIM1P49642 420 aaKnown RBP14.41□□□□□ -0.1
VPS50-201ENST00000251739 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
VPS50-201ENST00000251739 SYT17Q9BSW7 474 aa14.41□□□□□ -0.1
VPS50-201ENST00000251739 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
VPS50-201ENST00000251739 PNPLA7Q6ZV29 1317 aa14.41□□□□□ -0.1
VPS50-201ENST00000251739 CLSPNQ9HAW4 1339 aa14.41□□□□□ -0.1
VPS50-201ENST00000251739 GOLGB1Q14789 3259 aaKnown RBP14.4□□□□□ -0.1
VPS50-201ENST00000251739 HSP90AB2PQ58FF8 381 aa14.4□□□□□ -0.1
VPS50-201ENST00000251739 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
VPS50-201ENST00000251739 USHBP1Q8N6Y0 703 aa14.4□□□□□ -0.1
VPS50-201ENST00000251739 SLC16A10Q8TF71 515 aa14.39□□□□□ -0.11
VPS50-201ENST00000251739 ARXQ96QS3 562 aa14.38□□□□□ -0.11
VPS50-201ENST00000251739 KCNQ4P56696 695 aa14.37□□□□□ -0.11
VPS50-201ENST00000251739 RAPGEF4Q8WZA2 1011 aa14.37□□□□□ -0.11
VPS50-201ENST00000251739 SYTL4Q96C24 671 aaPredicted RBP14.37□□□□□ -0.11
VPS50-201ENST00000251739 EMILIN1Q9Y6C2 1016 aa14.37□□□□□ -0.11
VPS50-201ENST00000251739 UBR3Q6ZT12 1888 aa14.37□□□□□ -0.11
VPS50-201ENST00000251739 PCDH11XQ9BZA7 1347 aa14.37□□□□□ -0.11
VPS50-201ENST00000251739 PCDH11YQ9BZA8 1340 aa14.37□□□□□ -0.11
VPS50-201ENST00000251739 CYP27B1O15528 508 aa14.36□□□□□ -0.11
VPS50-201ENST00000251739 C4BP0C0L5 1744 aa14.35□□□□□ -0.11
VPS50-201ENST00000251739 TATP17735 454 aaPredicted RBP14.35□□□□□ -0.11
VPS50-201ENST00000251739 IFNLR1Q8IU57 520 aaPredicted RBP14.35□□□□□ -0.11
VPS50-201ENST00000251739 PRKAR2AP13861 404 aaKnown RBP14.34□□□□□ -0.11
VPS50-201ENST00000251739 CHADLQ6NUI6 762 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms