RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
PEX1-201ENST00000248633 ALKQ9UM73 1620 aa16.24■□□□□ 0.19
PEX1-201ENST00000248633 LAMC1P11047 1609 aa16.24■□□□□ 0.19
PEX1-201ENST00000248633 GAS2L2Q8NHY3 880 aa16.24■□□□□ 0.19
PEX1-201ENST00000248633 A0A0U1RQG5 324 aaPredicted RBP16.24■□□□□ 0.19
PEX1-201ENST00000248633 ZC3H6P61129 1189 aaKnown RBP16.24■□□□□ 0.19
PEX1-201ENST00000248633 DCTN1Q14203 1278 aa16.24■□□□□ 0.19
PEX1-201ENST00000248633 TWISTNBQ3B726 338 aaPredicted RBP16.23■□□□□ 0.19
PEX1-201ENST00000248633 RBM27Q9P2N5 1060 aaKnown RBP16.23■□□□□ 0.19
PEX1-201ENST00000248633 PIK3C2BO00750 1634 aa16.23■□□□□ 0.19
PEX1-201ENST00000248633 RABEP1Q15276 862 aa16.23■□□□□ 0.19
PEX1-201ENST00000248633 TTC21AQ8NDW8 1320 aa16.23■□□□□ 0.19
PEX1-201ENST00000248633 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
PEX1-201ENST00000248633 CIZ1Q9ULV3 898 aaPredicted RBP16.23■□□□□ 0.19
PEX1-201ENST00000248633 PHF14O94880 888 aa16.22■□□□□ 0.19
PEX1-201ENST00000248633 SETBP1Q9Y6X0 1596 aa16.22■□□□□ 0.19
PEX1-201ENST00000248633 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
PEX1-201ENST00000248633 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
PEX1-201ENST00000248633 ISY1Q9ULR0 285 aaKnown RBP16.22■□□□□ 0.19
PEX1-201ENST00000248633 EVA1CP58658 441 aa16.22■□□□□ 0.19
PEX1-201ENST00000248633 TBC1D9Q6ZT07 1266 aa16.22■□□□□ 0.19
PEX1-201ENST00000248633 KCNH5Q8NCM2 988 aa16.22■□□□□ 0.19
PEX1-201ENST00000248633 RAPGEF4Q8WZA2 1011 aa16.22■□□□□ 0.19
PEX1-201ENST00000248633 GCC1Q96CN9 775 aa16.22■□□□□ 0.19
PEX1-201ENST00000248633 PREX1Q8TCU6 1659 aa16.21■□□□□ 0.19
PEX1-201ENST00000248633 MROH2AA6NES4 1674 aa16.21■□□□□ 0.19
PEX1-201ENST00000248633 CDK11BP21127 795 aaKnown RBP16.21■□□□□ 0.19
PEX1-201ENST00000248633 CSPP1Q1MSJ5 1256 aa16.21■□□□□ 0.18
PEX1-201ENST00000248633 KRT28Q7Z3Y7 464 aa16.2■□□□□ 0.18
PEX1-201ENST00000248633 USHBP1Q8N6Y0 703 aa16.2■□□□□ 0.18
PEX1-201ENST00000248633 NRXN1Q9ULB1 1477 aa16.2■□□□□ 0.18
PEX1-201ENST00000248633 BLMP54132 1417 aaPredicted RBP16.2■□□□□ 0.18
PEX1-201ENST00000248633 EIF2S2P20042 333 aaKnown RBP16.2■□□□□ 0.18
PEX1-201ENST00000248633 MCM10Q7L590 875 aa16.2■□□□□ 0.18
PEX1-201ENST00000248633 ZNF592Q92610 1267 aa16.19■□□□□ 0.18
PEX1-201ENST00000248633 CCDC39Q9UFE4 941 aa16.19■□□□□ 0.18
PEX1-201ENST00000248633 PLEKHG3A1L390 1219 aa16.19■□□□□ 0.18
PEX1-201ENST00000248633 VPS37CA5D8V6 355 aaPredicted RBP16.19■□□□□ 0.18
PEX1-201ENST00000248633 BAG4O95429 457 aaKnown RBP16.19■□□□□ 0.18
PEX1-201ENST00000248633 EIF4A2Q14240 407 aaKnown RBP16.18■□□□□ 0.18
PEX1-201ENST00000248633 GDPD2Q9HCC8 539 aa16.18■□□□□ 0.18
PEX1-201ENST00000248633 AEBP1Q8IUX7 1158 aa16.18■□□□□ 0.18
PEX1-201ENST00000248633 PRR36Q9H6K5 1346 aa16.18■□□□□ 0.18
PEX1-201ENST00000248633 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
PEX1-201ENST00000248633 FIBPO43427 364 aa16.17■□□□□ 0.18
PEX1-201ENST00000248633 C19orf44Q9H6X5 657 aa16.17■□□□□ 0.18
PEX1-201ENST00000248633 FAM83GA6ND36 823 aa16.17■□□□□ 0.18
PEX1-201ENST00000248633 CT47B1P0C2W7 299 aaPredicted RBP16.17■□□□□ 0.18
PEX1-201ENST00000248633 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
PEX1-201ENST00000248633 FAM135BQ49AJ0 1406 aa16.16■□□□□ 0.18
PEX1-201ENST00000248633 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
PEX1-201ENST00000248633 CADPS2Q86UW7 1296 aa16.16■□□□□ 0.18
PEX1-201ENST00000248633 UPF3BQ9BZI7 483 aaKnown RBP16.16■□□□□ 0.18
PEX1-201ENST00000248633 QRICH2Q9H0J4 1663 aa16.16■□□□□ 0.18
PEX1-201ENST00000248633 FKBP5Q13451 457 aaPredicted RBP16.16■□□□□ 0.18
PEX1-201ENST00000248633 CCDC9Q9Y3X0 531 aaKnown RBP16.16■□□□□ 0.18
PEX1-201ENST00000248633 ORAI2Q96SN7 254 aa16.16■□□□□ 0.18
PEX1-201ENST00000248633 TSPY26PQ9H489 355 aa16.16■□□□□ 0.18
PEX1-201ENST00000248633 MIS18AQ9NYP9 233 aa16.16■□□□□ 0.18
PEX1-201ENST00000248633 PHACTR3Q96KR7 559 aa16.15■□□□□ 0.18
PEX1-201ENST00000248633 IQGAP1P46940 1657 aa16.15■□□□□ 0.18
PEX1-201ENST00000248633 ZNF530Q6P9A1 599 aaPredicted RBP16.15■□□□□ 0.18
PEX1-201ENST00000248633 KIAA1210Q9ULL0 1709 aa16.14■□□□□ 0.18
PEX1-201ENST00000248633 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.18
PEX1-201ENST00000248633 MAP4K4O95819 1239 aaPredicted RBP16.14■□□□□ 0.17
PEX1-201ENST00000248633 ZNF428Q96B54 188 aa16.14■□□□□ 0.17
PEX1-201ENST00000248633 NEURL4Q96JN8 1562 aa16.14■□□□□ 0.17
PEX1-201ENST00000248633 TSHZ3Q63HK5 1081 aa16.14■□□□□ 0.17
PEX1-201ENST00000248633 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
PEX1-201ENST00000248633 FBXW7Q969H0 707 aa16.13■□□□□ 0.17
PEX1-201ENST00000248633 ZNF330Q9Y3S2 320 aaPredicted RBP16.13■□□□□ 0.17
PEX1-201ENST00000248633 GOLGA6L6A8MZA4 724 aa16.13■□□□□ 0.17
PEX1-201ENST00000248633 SPATA31D1Q6ZQQ2 1576 aa16.13■□□□□ 0.17
PEX1-201ENST00000248633 POLR1AO95602 1720 aaPredicted RBP16.13■□□□□ 0.17
PEX1-201ENST00000248633 LARP6Q9BRS8 491 aaKnown RBP16.12■□□□□ 0.17
PEX1-201ENST00000248633 PRDM11Q9NQV5 511 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 IFT57Q9NWB7 429 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 TULP4Q9NRJ4 1543 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 USP19O94966 1318 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 MBD3O95983 291 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 BMP2KLQ5H9B9 411 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 PDCL3Q9H2J4 239 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 EXOC6BQ9Y2D4 811 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 TMEM131LA2VDJ0 1609 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 NUCB1Q02818 461 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 GAS2L3Q86XJ1 694 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 PTPRMP28827 1452 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 INSRP06213 1382 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 IL13P35225 146 aa16.12■□□□□ 0.17
PEX1-201ENST00000248633 HDAC1Q13547 482 aaPredicted RBP16.11■□□□□ 0.17
PEX1-201ENST00000248633 ZSCAN23Q3MJ62 389 aa16.11■□□□□ 0.17
PEX1-201ENST00000248633 ZNF771Q7L3S4 317 aaPredicted RBP16.11■□□□□ 0.17
PEX1-201ENST00000248633 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
PEX1-201ENST00000248633 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
PEX1-201ENST00000248633 PPLO60437 1756 aa16.11■□□□□ 0.17
PEX1-201ENST00000248633 GNAT3A8MTJ3 354 aa16.11■□□□□ 0.17
PEX1-201ENST00000248633 SMC3Q9UQE7 1217 aa16.11■□□□□ 0.17
PEX1-201ENST00000248633 MSH6P52701 1360 aa16.11■□□□□ 0.17
PEX1-201ENST00000248633 ATP7BP35670 1465 aa16.11■□□□□ 0.17
PEX1-201ENST00000248633 ERC2O15083 957 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms