RNA–Protein interactions for RNA: ENST00000246535.3

PDCD2L-201, Transcript of programmed cell death 2 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2L, Length 1,171 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2L-201ENST00000246535 AMPHP49418 695 aa23.11■■□□□ 1.29
PDCD2L-201ENST00000246535 ZNF784Q8NCA9 323 aaPredicted RBP23.11■■□□□ 1.29
PDCD2L-201ENST00000246535 SYTL4Q96C24 671 aaPredicted RBP23.11■■□□□ 1.29
PDCD2L-201ENST00000246535 PNPLA7Q6ZV29 1317 aa23.1■■□□□ 1.29
PDCD2L-201ENST00000246535 SLC27A3Q5K4L6 730 aa23.1■■□□□ 1.29
PDCD2L-201ENST00000246535 ANKRD36BQ8N2N9 1353 aa23.1■■□□□ 1.29
PDCD2L-201ENST00000246535 RRS1Q15050 365 aaKnown RBP23.09■■□□□ 1.29
PDCD2L-201ENST00000246535 NBPF6Q5VWK0 638 aa23.09■■□□□ 1.29
PDCD2L-201ENST00000246535 ZCRB1Q8TBF4 217 aaKnown RBP23.09■■□□□ 1.29
PDCD2L-201ENST00000246535 NBPF4Q96M43 638 aa23.09■■□□□ 1.29
PDCD2L-201ENST00000246535 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
PDCD2L-201ENST00000246535 FYB1O15117 783 aa23.08■■□□□ 1.29
PDCD2L-201ENST00000246535 MAP3K5Q99683 1374 aa23.08■■□□□ 1.29
PDCD2L-201ENST00000246535 USHBP1Q8N6Y0 703 aa23.07■■□□□ 1.28
PDCD2L-201ENST00000246535 GGNBP2Q9H3C7 697 aa23.07■■□□□ 1.28
PDCD2L-201ENST00000246535 SLC16A10Q8TF71 515 aa23.05■■□□□ 1.28
PDCD2L-201ENST00000246535 TFCP2L1Q9NZI6 479 aa23.05■■□□□ 1.28
PDCD2L-201ENST00000246535 KIF20BQ96Q89 1820 aa23.03■■□□□ 1.28
PDCD2L-201ENST00000246535 RTL1A6NKG5 1358 aa23.02■■□□□ 1.28
PDCD2L-201ENST00000246535 KLHL34Q8N239 644 aa23.02■■□□□ 1.28
PDCD2L-201ENST00000246535 HSP90AB2PQ58FF8 381 aa23.01■■□□□ 1.27
PDCD2L-201ENST00000246535 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
PDCD2L-201ENST00000246535 SLC24A1O60721 1099 aa23■■□□□ 1.27
PDCD2L-201ENST00000246535 GPR162Q16538 588 aa23■■□□□ 1.27
PDCD2L-201ENST00000246535 NLGN2Q8NFZ4 835 aa23■■□□□ 1.27
PDCD2L-201ENST00000246535 POLD1P28340 1107 aa22.99■■□□□ 1.27
PDCD2L-201ENST00000246535 TMF1P82094 1093 aa22.99■■□□□ 1.27
PDCD2L-201ENST00000246535 USP47Q96K76 1375 aa22.99■■□□□ 1.27
PDCD2L-201ENST00000246535 COL23A1Q86Y22 540 aaPredicted RBP22.98■■□□□ 1.27
PDCD2L-201ENST00000246535 CLSPNQ9HAW4 1339 aa22.98■■□□□ 1.27
PDCD2L-201ENST00000246535 C5P01031 1676 aa22.97■■□□□ 1.27
PDCD2L-201ENST00000246535 TAF1LQ8IZX4 1826 aa22.97■■□□□ 1.27
PDCD2L-201ENST00000246535 ITGB4P16144 1822 aa22.96■■□□□ 1.27
PDCD2L-201ENST00000246535 RAPGEF4Q8WZA2 1011 aa22.96■■□□□ 1.27
PDCD2L-201ENST00000246535 CARD14Q9BXL6 1004 aa22.96■■□□□ 1.27
PDCD2L-201ENST00000246535 CGNL1Q0VF96 1302 aa22.96■■□□□ 1.27
PDCD2L-201ENST00000246535 INSRP06213 1382 aa22.96■■□□□ 1.27
PDCD2L-201ENST00000246535 TOGARAM1Q9Y4F4 1720 aa22.96■■□□□ 1.27
PDCD2L-201ENST00000246535 SMG6Q86US8 1419 aaKnown RBP22.94■■□□□ 1.26
PDCD2L-201ENST00000246535 TATP17735 454 aaPredicted RBP22.94■■□□□ 1.26
PDCD2L-201ENST00000246535 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
PDCD2L-201ENST00000246535 MSH5O43196 834 aa22.93■■□□□ 1.26
PDCD2L-201ENST00000246535 CYP27B1O15528 508 aa22.92■■□□□ 1.26
PDCD2L-201ENST00000246535 GOLGB1Q14789 3259 aaKnown RBP22.92■■□□□ 1.26
PDCD2L-201ENST00000246535 FLT4P35916 1363 aa22.91■■□□□ 1.26
PDCD2L-201ENST00000246535 MSL1Q68DK7 614 aa22.91■■□□□ 1.26
PDCD2L-201ENST00000246535 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
PDCD2L-201ENST00000246535 PKD1L3Q7Z443 1732 aa22.91■■□□□ 1.26
PDCD2L-201ENST00000246535 PCDH11XQ9BZA7 1347 aa22.9■■□□□ 1.26
PDCD2L-201ENST00000246535 PCDH11YQ9BZA8 1340 aa22.9■■□□□ 1.26
PDCD2L-201ENST00000246535 MPRIPQ6WCQ1 1025 aa22.9■■□□□ 1.26
PDCD2L-201ENST00000246535 MAP2P11137 1827 aaKnown RBP22.89■■□□□ 1.26
PDCD2L-201ENST00000246535 YBX3P16989 372 aaKnown RBP eCLIP22.89■■□□□ 1.251e-7■□□□□ 8.1
PDCD2L-201ENST00000246535 C1QTNF8P60827 252 aa22.89■■□□□ 1.25
PDCD2L-201ENST00000246535 TIMELESSQ9UNS1 1208 aa22.89■■□□□ 1.25
PDCD2L-201ENST00000246535 AMIGO3Q86WK7 504 aa22.88■■□□□ 1.25
PDCD2L-201ENST00000246535 KIF24Q5T7B8 1368 aa22.88■■□□□ 1.25
PDCD2L-201ENST00000246535 PALLDQ8WX93 1383 aa22.88■■□□□ 1.25
PDCD2L-201ENST00000246535 SMIM5Q71RC9 77 aa22.87■■□□□ 1.25
PDCD2L-201ENST00000246535 NSD3Q9BZ95 1437 aa22.87■■□□□ 1.25
PDCD2L-201ENST00000246535 ANKRD26Q9UPS8 1709 aa22.87■■□□□ 1.25
PDCD2L-201ENST00000246535 C4BP0C0L5 1744 aa22.86■■□□□ 1.25
PDCD2L-201ENST00000246535 NCAPD2Q15021 1401 aa22.85■■□□□ 1.25
PDCD2L-201ENST00000246535 UBR3Q6ZT12 1888 aa22.85■■□□□ 1.25
PDCD2L-201ENST00000246535 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
PDCD2L-201ENST00000246535 SENP3-EIF4A1A0A087X0R7 540 aa22.83■■□□□ 1.25
PDCD2L-201ENST00000246535 PPM1GO15355 546 aaPredicted RBP22.83■■□□□ 1.25
PDCD2L-201ENST00000246535 PIGBQ92521 554 aa22.83■■□□□ 1.25
PDCD2L-201ENST00000246535 NKX1-1Q15270 411 aaPredicted RBP22.81■■□□□ 1.24
PDCD2L-201ENST00000246535 EYA1Q99502 592 aa22.8■■□□□ 1.24
PDCD2L-201ENST00000246535 WASHC2AQ641Q2 1341 aa22.8■■□□□ 1.24
PDCD2L-201ENST00000246535 CCER1Q8TC90 406 aaPredicted RBP22.79■■□□□ 1.24
PDCD2L-201ENST00000246535 GRIN3BO60391 1043 aa22.78■■□□□ 1.24
PDCD2L-201ENST00000246535 FLAD1Q8NFF5 587 aa22.78■■□□□ 1.24
PDCD2L-201ENST00000246535 SMARCC1Q92922 1105 aaPredicted RBP22.78■■□□□ 1.24
PDCD2L-201ENST00000246535 CD2APQ9Y5K6 639 aa22.78■■□□□ 1.24
PDCD2L-201ENST00000246535 GIGYF1O75420 1035 aaPredicted RBP22.77■■□□□ 1.24
PDCD2L-201ENST00000246535 PHF14O94880 888 aa22.77■■□□□ 1.24
PDCD2L-201ENST00000246535 LINC00116Q8NCU8 138 aa22.77■■□□□ 1.24
PDCD2L-201ENST00000246535 POLKQ9UBT6 870 aa22.77■■□□□ 1.24
PDCD2L-201ENST00000246535 AK7Q96M32 723 aa22.76■■□□□ 1.23
PDCD2L-201ENST00000246535 SPG7Q9UQ90 795 aa22.76■■□□□ 1.23
PDCD2L-201ENST00000246535 ASAP1Q9ULH1 1129 aa22.75■■□□□ 1.23
PDCD2L-201ENST00000246535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.74■■□□□ 1.23
PDCD2L-201ENST00000246535 LOC102724428A0A0B4J2F2 783 aa22.74■■□□□ 1.23
PDCD2L-201ENST00000246535 SIK1P57059 783 aa22.74■■□□□ 1.23
PDCD2L-201ENST00000246535 ITPK1Q13572 414 aa22.74■■□□□ 1.23
PDCD2L-201ENST00000246535 PHKG2P15735 406 aa22.73■■□□□ 1.23
PDCD2L-201ENST00000246535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.72■■□□□ 1.23
PDCD2L-201ENST00000246535 HMGB2P26583 209 aaKnown RBP22.71■■□□□ 1.23
PDCD2L-201ENST00000246535 TNNT2P45379 298 aaPredicted RBP22.71■■□□□ 1.23
PDCD2L-201ENST00000246535 EIF4A2Q14240 407 aaKnown RBP22.71■■□□□ 1.23
PDCD2L-201ENST00000246535 TMOD3Q9NYL9 352 aa22.71■■□□□ 1.23
PDCD2L-201ENST00000246535 WWC3Q9ULE0 1092 aa22.71■■□□□ 1.23
PDCD2L-201ENST00000246535 IFNL2Q8IZJ0 200 aa22.7■■□□□ 1.22
PDCD2L-201ENST00000246535 POLR3GLQ9BT43 218 aa22.7■■□□□ 1.22
PDCD2L-201ENST00000246535 ATG3Q9NT62 314 aa22.7■■□□□ 1.22
PDCD2L-201ENST00000246535 ATP10DQ9P241 1426 aa22.7■■□□□ 1.22
PDCD2L-201ENST00000246535 SSFA2P28290 1259 aa22.69■■□□□ 1.22
PDCD2L-201ENST00000246535 ATP6V1AP38606 617 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms