RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 LRRIQ1Q96JM4 1722 aa16.56■□□□□ 0.24
NCLN-201ENST00000246117 SF3A1Q15459 793 aaKnown RBP16.55■□□□□ 0.24
NCLN-201ENST00000246117 RUFY2Q8WXA3 655 aa16.55■□□□□ 0.24
NCLN-201ENST00000246117 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
NCLN-201ENST00000246117 ZBTB7BO15156 539 aaPredicted RBP16.55■□□□□ 0.24
NCLN-201ENST00000246117 BAG4O95429 457 aaKnown RBP16.55■□□□□ 0.24
NCLN-201ENST00000246117 CREBRFQ8IUR6 639 aa16.55■□□□□ 0.24
NCLN-201ENST00000246117 CNTROBQ8N137 903 aa16.54■□□□□ 0.24
NCLN-201ENST00000246117 CCDC8Q9H0W5 538 aaPredicted RBP16.54■□□□□ 0.24
NCLN-201ENST00000246117 GNAT3A8MTJ3 354 aa16.54■□□□□ 0.24
NCLN-201ENST00000246117 AACSQ86V21 672 aa16.54■□□□□ 0.24
NCLN-201ENST00000246117 PHF14O94880 888 aa16.54■□□□□ 0.24
NCLN-201ENST00000246117 JAKMIP1Q96N16 626 aaKnown RBP16.53■□□□□ 0.24
NCLN-201ENST00000246117 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.53■□□□□ 0.249e-7■■□□□ 12.3
NCLN-201ENST00000246117 TTC22Q5TAA0 569 aa16.53■□□□□ 0.24
NCLN-201ENST00000246117 SAMD9LQ8IVG5 1584 aa16.53■□□□□ 0.24
NCLN-201ENST00000246117 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
NCLN-201ENST00000246117 CCDC83Q8IWF9 413 aa16.52■□□□□ 0.24
NCLN-201ENST00000246117 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
NCLN-201ENST00000246117 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.24
NCLN-201ENST00000246117 APPP05067 770 aa16.52■□□□□ 0.24
NCLN-201ENST00000246117 MTHFSDQ2M296 383 aaKnown RBP16.52■□□□□ 0.24
NCLN-201ENST00000246117 PI4KAP2A4QPH2 592 aa16.51■□□□□ 0.23
NCLN-201ENST00000246117 PI4KAP1Q8N8J0 262 aa16.51■□□□□ 0.23
NCLN-201ENST00000246117 RRAGDQ9NQL2 400 aaPredicted RBP16.51■□□□□ 0.23
NCLN-201ENST00000246117 ATP10AO60312 1499 aa16.51■□□□□ 0.23
NCLN-201ENST00000246117 CASTP20810 708 aaKnown RBP16.51■□□□□ 0.23
NCLN-201ENST00000246117 DDX58O95786 925 aaKnown RBP16.51■□□□□ 0.23
NCLN-201ENST00000246117 PLEKHM2Q8IWE5 1019 aa16.51■□□□□ 0.23
NCLN-201ENST00000246117 PRPF40BQ6NWY9 871 aaKnown RBP16.5■□□□□ 0.23
NCLN-201ENST00000246117 DDX11Q96FC9 970 aa16.5■□□□□ 0.23
NCLN-201ENST00000246117 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
NCLN-201ENST00000246117 CPA1P15085 419 aa16.5■□□□□ 0.23
NCLN-201ENST00000246117 PPP1R42Q7Z4L9 355 aa16.5■□□□□ 0.23
NCLN-201ENST00000246117 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
NCLN-201ENST00000246117 ATP6V1DQ9Y5K8 247 aa16.5■□□□□ 0.23
NCLN-201ENST00000246117 BECN2A8MW95 431 aa16.49■□□□□ 0.23
NCLN-201ENST00000246117 CAMK4Q16566 473 aa16.49■□□□□ 0.23
NCLN-201ENST00000246117 ERCC6L2Q5T890 1561 aa16.49■□□□□ 0.23
NCLN-201ENST00000246117 CD2BP2O95400 341 aaKnown RBP16.49■□□□□ 0.23
NCLN-201ENST00000246117 WASHC4Q2M389 1173 aa16.49■□□□□ 0.23
NCLN-201ENST00000246117 TTC21BQ7Z4L5 1316 aa16.48■□□□□ 0.23
NCLN-201ENST00000246117 PPIP5K1Q6PFW1 1433 aa16.48■□□□□ 0.23
NCLN-201ENST00000246117 PDE1AP54750 535 aa16.48■□□□□ 0.23
NCLN-201ENST00000246117 LRRC59Q96AG4 307 aaKnown RBP16.48■□□□□ 0.23
NCLN-201ENST00000246117 ABCC2Q92887 1545 aa16.48■□□□□ 0.23
NCLN-201ENST00000246117 ERVK-7P63135 1459 aa16.48■□□□□ 0.23
NCLN-201ENST00000246117 CEP85Q6P2H3 762 aa16.48■□□□□ 0.23
NCLN-201ENST00000246117 PHAXQ9H814 394 aaKnown RBP16.48■□□□□ 0.23
NCLN-201ENST00000246117 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
NCLN-201ENST00000246117 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
NCLN-201ENST00000246117 MAST1Q9Y2H9 1570 aa16.47■□□□□ 0.23
NCLN-201ENST00000246117 PTCD1O75127 700 aaKnown RBP16.47■□□□□ 0.23
NCLN-201ENST00000246117 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
NCLN-201ENST00000246117 IL16Q14005 1332 aa16.47■□□□□ 0.23
NCLN-201ENST00000246117 PRKCSHP14314 528 aaPredicted RBP16.47■□□□□ 0.23
NCLN-201ENST00000246117 PKP1Q13835 747 aa16.47■□□□□ 0.23
NCLN-201ENST00000246117 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
NCLN-201ENST00000246117 ISY1Q9ULR0 285 aaKnown RBP16.47■□□□□ 0.23
NCLN-201ENST00000246117 PA2G4Q9UQ80 394 aaKnown RBP16.47■□□□□ 0.23
NCLN-201ENST00000246117 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
NCLN-201ENST00000246117 CHMP4CQ96CF2 233 aa16.47■□□□□ 0.23
NCLN-201ENST00000246117 STRN4Q9NRL3 753 aa16.47■□□□□ 0.23
NCLN-201ENST00000246117 GOLGA6L19H0YKK7 550 aa16.46■□□□□ 0.23
NCLN-201ENST00000246117 TMX3Q96JJ7 454 aa16.46■□□□□ 0.23
NCLN-201ENST00000246117 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
NCLN-201ENST00000246117 NPATQ14207 1427 aa16.46■□□□□ 0.23
NCLN-201ENST00000246117 NSD2O96028 1365 aa16.46■□□□□ 0.23
NCLN-201ENST00000246117 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
NCLN-201ENST00000246117 ZNF830Q96NB3 372 aaPredicted RBP16.46■□□□□ 0.23
NCLN-201ENST00000246117 CCDC173Q0VFZ6 552 aa16.46■□□□□ 0.22
NCLN-201ENST00000246117 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.22
NCLN-201ENST00000246117 KDM5DQ9BY66 1539 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 KAT6BQ8WYB5 2073 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 ATP2B1P20020 1258 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 EVA1CP58658 441 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 TFIP11Q9UBB9 837 aaKnown RBP16.45■□□□□ 0.22
NCLN-201ENST00000246117 EIF2AK4Q9P2K8 1649 aaKnown RBP16.45■□□□□ 0.22
NCLN-201ENST00000246117 IL13P35225 146 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 SLC39A6Q13433 755 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 LARP1BQ659C4 914 aaKnown RBP16.45■□□□□ 0.22
NCLN-201ENST00000246117 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 CSPP1Q1MSJ5 1256 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 RNF20Q5VTR2 975 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 EYA1Q99502 592 aa16.45■□□□□ 0.22
NCLN-201ENST00000246117 MBD3O95983 291 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
NCLN-201ENST00000246117 CHPF2Q9P2E5 772 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 THEMISQ8N1K5 641 aaPredicted RBP16.44■□□□□ 0.22
NCLN-201ENST00000246117 DCTPP1Q9H773 170 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 USP25Q9UHP3 1055 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.44■□□□□ 0.22
NCLN-201ENST00000246117 ABCA8O94911 1581 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 ADGBQ8N7X0 1667 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 ATP5J2-PTCD1G3V325 749 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 CYP46A1Q9Y6A2 500 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 USP19O94966 1318 aa16.44■□□□□ 0.22
NCLN-201ENST00000246117 MAP3K19Q56UN5 1328 aa16.43■□□□□ 0.22
NCLN-201ENST00000246117 ZNF518AQ6AHZ1 1483 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms