RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 NUDT16Q96DE0 195 aaKnown RBP8.66□□□□□ -1.02
SSR1-201ENST00000244763 NEFHP12036 1026 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 CETN2P41208 172 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 PPP4R3AQ6IN85 833 aa8.66□□□□□ -1.02
SSR1-201ENST00000244763 TOPBP1Q92547 1522 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 ATP2B1P20020 1258 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 RAB34Q9BZG1 259 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 EHMT1Q9H9B1 1298 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 IMMTQ16891 758 aaKnown RBP8.65□□□□□ -1.02
SSR1-201ENST00000244763 CCDC192P0DO97 292 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 NFE2L2Q16236 605 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 CUL7Q14999 1698 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 KIF1BPQ96EK5 621 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 RAI14Q9P0K7 980 aa8.65□□□□□ -1.02
SSR1-201ENST00000244763 U3KPZ7 1027 aaPredicted RBP8.65□□□□□ -1.02
SSR1-201ENST00000244763 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.65□□□□□ -1.03
SSR1-201ENST00000244763 SRGAP3O43295 1099 aa8.65□□□□□ -1.03
SSR1-201ENST00000244763 MAP7D2Q96T17 732 aa8.65□□□□□ -1.03
SSR1-201ENST00000244763 IQCEQ6IPM2 695 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 FAM43AQ8N2R8 423 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 ZHX3Q9H4I2 956 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 CWC15Q9P013 229 aaKnown RBP8.64□□□□□ -1.03
SSR1-201ENST00000244763 GOLGA6L10A6NI86 522 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 NASPP49321 788 aaPredicted RBP8.64□□□□□ -1.03
SSR1-201ENST00000244763 IL27Q8NEV9 243 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 SEC63Q9UGP8 760 aaKnown RBP8.64□□□□□ -1.03
SSR1-201ENST00000244763 SERPINC1P01008 464 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 CD109Q6YHK3 1445 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 HMGB1P09429 215 aaKnown RBP8.64□□□□□ -1.03
SSR1-201ENST00000244763 CEP57L1Q8IYX8 460 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 MKNK2Q9HBH9 465 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 TOP2BQ02880 1626 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 CAVIN1Q6NZI2 390 aaKnown RBP8.64□□□□□ -1.03
SSR1-201ENST00000244763 AIDAQ96BJ3 306 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 SMTNL1A8MU46 457 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 TSPY26PQ9H489 355 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 METTL24Q5JXM2 366 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 NUP133Q8WUM0 1156 aa8.64□□□□□ -1.03
SSR1-201ENST00000244763 TANGO6Q9C0B7 1094 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 KIAA0586Q9BVV6 1533 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 GLRX3O76003 335 aaKnown RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 ZNF397Q8NF99 534 aaPredicted RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 FGFR1OPO95684 399 aaKnown RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 AACSQ86V21 672 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 KIF14Q15058 1648 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 USP5P45974 858 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 ME1P48163 572 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 CCDC181Q5TID7 509 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 IQCA1Q86XH1 822 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 TRAF1Q13077 416 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 MVPQ14764 893 aaKnown RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 TAF7Q15545 349 aaPredicted RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 LARP1BQ659C4 914 aaKnown RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 CRACR2BQ8N4Y2 399 aaPredicted RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 BRPF1P55201 1214 aaPredicted RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 MAP3K12Q12852 859 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 KIF20AO95235 890 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 RAPGEF3O95398 923 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 MPHOSPH6Q99547 160 aaKnown RBP8.63□□□□□ -1.03
SSR1-201ENST00000244763 SIL1Q9H173 461 aa8.63□□□□□ -1.03
SSR1-201ENST00000244763 NEBLO76041 1014 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 MATR3P43243 847 aaKnown RBP eCLIP8.62□□□□□ -1.032e-7■■■■□ 19.4
SSR1-201ENST00000244763 PATL2C9JE40 543 aaKnown RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 EXOC5O00471 708 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 ZNF444Q8N0Y2 327 aaPredicted RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 ABCC11Q96J66 1382 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 HMGN5P82970 282 aaKnown RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 RNF41Q9H4P4 317 aaPredicted RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 PHAXQ9H814 394 aaKnown RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 PDZRN3Q9UPQ7 1066 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 ABCF2Q9UG63 623 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 RPGRQ92834 1020 aaKnown RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 POLR3DP05423 398 aaPredicted RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 ZC3H6P61129 1189 aaKnown RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 CADPS2Q86UW7 1296 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 POLA1P09884 1462 aaPredicted RBP8.62□□□□□ -1.03
SSR1-201ENST00000244763 TRAK2O60296 914 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 LDHCP07864 332 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 CHD1LQ86WJ1 897 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 HYPKQ9NX55 129 aa8.62□□□□□ -1.03
SSR1-201ENST00000244763 KAT6BQ8WYB5 2073 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 PPP4R3BQ5MIZ7 849 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 TNMDQ9H2S6 317 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 GBP2P32456 591 aaPredicted RBP8.61□□□□□ -1.03
SSR1-201ENST00000244763 JAKMIP3Q5VZ66 844 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 DZIP1Q86YF9 867 aaKnown RBP8.61□□□□□ -1.03
SSR1-201ENST00000244763 IQGAP2Q13576 1575 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 A0A087WZG4 1122 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 SLC5A1P13866 664 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 EZRP15311 586 aaKnown RBP8.61□□□□□ -1.03
SSR1-201ENST00000244763 CCDC150Q8NCX0 1101 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 CUL5Q93034 780 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 IDH1O75874 414 aaKnown RBP8.61□□□□□ -1.03
SSR1-201ENST00000244763 IFIT5Q13325 482 aaKnown RBP8.61□□□□□ -1.03
SSR1-201ENST00000244763 ALDH1L2Q3SY69 923 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 FBXO3Q9UK99 471 aa8.61□□□□□ -1.03
SSR1-201ENST00000244763 CDC5LQ99459 802 aaKnown RBP8.61□□□□□ -1.03
SSR1-201ENST00000244763 K7ELQ4 463 aaPredicted RBP8.6□□□□□ -1.03
SSR1-201ENST00000244763 ANKIB1Q9P2G1 1089 aa8.6□□□□□ -1.03
SSR1-201ENST00000244763 GOLGA6L7A0A1B0GV03 622 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms