RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 CALRP27797 417 aaKnown RBP11.18□□□□□ -0.62
SRSF6-201ENST00000244020 RPAP2Q8IXW5 612 aaPredicted RBP11.18□□□□□ -0.62
SRSF6-201ENST00000244020 PRIMPOLQ96LW4 560 aa11.18□□□□□ -0.62
SRSF6-201ENST00000244020 IFT57Q9NWB7 429 aa11.18□□□□□ -0.62
SRSF6-201ENST00000244020 JARID2Q92833 1246 aaPredicted RBP11.18□□□□□ -0.62
SRSF6-201ENST00000244020 C17orf53Q8N3J3 647 aaPredicted RBP11.17□□□□□ -0.62
SRSF6-201ENST00000244020 CFAP74Q9C0B2 1584 aa11.17□□□□□ -0.62
SRSF6-201ENST00000244020 FAM184AQ8NB25 1140 aa11.17□□□□□ -0.62
SRSF6-201ENST00000244020 ADCY5O95622 1261 aa11.17□□□□□ -0.62
SRSF6-201ENST00000244020 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
SRSF6-201ENST00000244020 DCTN1Q14203 1278 aa11.17□□□□□ -0.62
SRSF6-201ENST00000244020 UPF3BQ9BZI7 483 aaKnown RBP11.16□□□□□ -0.62
SRSF6-201ENST00000244020 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
SRSF6-201ENST00000244020 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
SRSF6-201ENST00000244020 BRPF1P55201 1214 aaPredicted RBP11.16□□□□□ -0.62
SRSF6-201ENST00000244020 GOLGA6L1Q8N7Z2 621 aa11.16□□□□□ -0.62
SRSF6-201ENST00000244020 ABCC4O15439 1325 aa11.16□□□□□ -0.62
SRSF6-201ENST00000244020 SPDYE4A6NLX3 237 aa11.16□□□□□ -0.62
SRSF6-201ENST00000244020 PATL2C9JE40 543 aaKnown RBP11.16□□□□□ -0.62
SRSF6-201ENST00000244020 ANKRD44Q8N8A2 993 aa11.16□□□□□ -0.62
SRSF6-201ENST00000244020 PUS7Q96PZ0 661 aaKnown RBP11.16□□□□□ -0.62
SRSF6-201ENST00000244020 KIAA1210Q9ULL0 1709 aa11.16□□□□□ -0.62
SRSF6-201ENST00000244020 CCAR2Q8N163 923 aaKnown RBP11.16□□□□□ -0.62
SRSF6-201ENST00000244020 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.16□□□□□ -0.62
SRSF6-201ENST00000244020 TRERF1Q96PN7 1200 aa11.16□□□□□ -0.62
SRSF6-201ENST00000244020 PRAM1Q96QH2 718 aa11.16□□□□□ -0.62
SRSF6-201ENST00000244020 FAM83GA6ND36 823 aa11.15□□□□□ -0.62
SRSF6-201ENST00000244020 HCLS1P14317 486 aaPredicted RBP11.15□□□□□ -0.62
SRSF6-201ENST00000244020 USP48Q86UV5 1035 aa11.15□□□□□ -0.62
SRSF6-201ENST00000244020 TSHZ3Q63HK5 1081 aa11.15□□□□□ -0.62
SRSF6-201ENST00000244020 PDCL2Q8N4E4 241 aa11.15□□□□□ -0.62
SRSF6-201ENST00000244020 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.62
SRSF6-201ENST00000244020 DIAPH3Q9NSV4 1193 aa11.15□□□□□ -0.62
SRSF6-201ENST00000244020 NAP1L2Q9ULW6 460 aaPredicted RBP11.15□□□□□ -0.62
SRSF6-201ENST00000244020 RPGRIP1LQ68CZ1 1315 aa11.15□□□□□ -0.62
SRSF6-201ENST00000244020 WDR33Q9C0J8 1336 aaKnown RBP11.15□□□□□ -0.63
SRSF6-201ENST00000244020 GADD45BO75293 160 aaPredicted RBP11.14□□□□□ -0.63
SRSF6-201ENST00000244020 SPC24Q8NBT2 197 aa11.14□□□□□ -0.63
SRSF6-201ENST00000244020 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
SRSF6-201ENST00000244020 TET3O43151 1660 aa11.14□□□□□ -0.63
SRSF6-201ENST00000244020 BRD1O95696 1058 aa11.14□□□□□ -0.63
SRSF6-201ENST00000244020 SHROOM2Q13796 1616 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 CEP85Q6P2H3 762 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 ABCC1P33527 1531 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 DMTNQ08495 405 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 UVSSAQ2YD98 709 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 CGNQ9P2M7 1197 aaKnown RBP11.13□□□□□ -0.63
SRSF6-201ENST00000244020 FIBPO43427 364 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 CCDC183Q5T5S1 534 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
SRSF6-201ENST00000244020 NOC3LQ8WTT2 800 aaKnown RBP11.13□□□□□ -0.63
SRSF6-201ENST00000244020 MEIS3Q99687 375 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 KIF1BO60333 1816 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 LETM1O95202 739 aaPredicted RBP11.13□□□□□ -0.63
SRSF6-201ENST00000244020 EXOC6BQ9Y2D4 811 aa11.13□□□□□ -0.63
SRSF6-201ENST00000244020 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
SRSF6-201ENST00000244020 FGD1P98174 961 aa11.12□□□□□ -0.63
SRSF6-201ENST00000244020 POLKQ9UBT6 870 aa11.12□□□□□ -0.63
SRSF6-201ENST00000244020 EMILIN1Q9Y6C2 1016 aa11.12□□□□□ -0.63
SRSF6-201ENST00000244020 PDIA4P13667 645 aaKnown RBP11.12□□□□□ -0.63
SRSF6-201ENST00000244020 PDE1AP54750 535 aa11.12□□□□□ -0.63
SRSF6-201ENST00000244020 CFAP65Q6ZU64 1925 aaKnown RBP11.12□□□□□ -0.63
SRSF6-201ENST00000244020 SLC4A2P04920 1241 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 IGSF3O75054 1194 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 KCNJ4P48050 445 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 MED14O60244 1454 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 QRICH2Q9H0J4 1663 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 SETQ01105 290 aaPredicted RBP11.11□□□□□ -0.63
SRSF6-201ENST00000244020 GNL2Q13823 731 aaKnown RBP11.11□□□□□ -0.63
SRSF6-201ENST00000244020 KRT24Q2M2I5 525 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 ATP6V1DQ9Y5K8 247 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 PTCH1Q13635 1447 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 CCDC66A2RUB6 948 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 ERICH4A6NGS2 130 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 CNPY2Q9Y2B0 182 aa11.11□□□□□ -0.63
SRSF6-201ENST00000244020 INTS4Q96HW7 963 aaKnown RBP11.1□□□□□ -0.63
SRSF6-201ENST00000244020 ESYT1Q9BSJ8 1104 aa11.1□□□□□ -0.63
SRSF6-201ENST00000244020 GTPBP4Q9BZE4 634 aaKnown RBP11.1□□□□□ -0.63
SRSF6-201ENST00000244020 UTP14CQ5TAP6 766 aaKnown RBP11.1□□□□□ -0.63
SRSF6-201ENST00000244020 BCL2L12Q9HB09 334 aa11.1□□□□□ -0.63
SRSF6-201ENST00000244020 NPHP1O15259 732 aa11.1□□□□□ -0.63
SRSF6-201ENST00000244020 MX1P20591 662 aa11.1□□□□□ -0.63
SRSF6-201ENST00000244020 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
SRSF6-201ENST00000244020 PAXIP1Q6ZW49 1069 aaPredicted RBP11.1□□□□□ -0.63
SRSF6-201ENST00000244020 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
SRSF6-201ENST00000244020 SMC3Q9UQE7 1217 aa11.1□□□□□ -0.63
SRSF6-201ENST00000244020 ZFYVE16Q7Z3T8 1539 aa11.1□□□□□ -0.63
SRSF6-201ENST00000244020 FANCAO15360 1455 aa11.1□□□□□ -0.63
SRSF6-201ENST00000244020 ATP7AQ04656 1500 aa11.09□□□□□ -0.63
SRSF6-201ENST00000244020 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
SRSF6-201ENST00000244020 ZSCAN20P17040 1043 aaPredicted RBP11.09□□□□□ -0.63
SRSF6-201ENST00000244020 SKIDA1Q1XH10 827 aa11.09□□□□□ -0.63
SRSF6-201ENST00000244020 GIMAP6Q6P9H5 292 aa11.09□□□□□ -0.63
SRSF6-201ENST00000244020 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
SRSF6-201ENST00000244020 LRRCC1Q9C099 1032 aa11.09□□□□□ -0.63
SRSF6-201ENST00000244020 PIK3R4Q99570 1358 aa11.09□□□□□ -0.63
SRSF6-201ENST00000244020 KDM4AO75164 1064 aa11.09□□□□□ -0.63
SRSF6-201ENST00000244020 TPM3P06753 285 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms