RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 VAMP4O75379 141 aa8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 MBD3O95983 291 aa8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 PLEKHO1Q53GL0 409 aaPredicted RBP8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 ZBTB40Q9NUA8 1239 aa8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 CIZ1Q9ULV3 898 aaPredicted RBP8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 SPG7Q9UQ90 795 aa8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 SDSP20132 328 aa8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 RBM27Q9P2N5 1060 aaKnown RBP8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 ZMYM4Q5VZL5 1548 aa8.91□□□□□ -0.98
NEUROD4-201ENST00000242994 DTNBO60941 627 aa8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 PPFIA3O75145 1194 aa8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 THEMISQ8N1K5 641 aaPredicted RBP8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 KDM5CP41229 1560 aa8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 PROSER2Q86WR7 435 aaPredicted RBP8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 OTUD7AQ8TE49 926 aaPredicted RBP8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 FMNL2Q96PY5 1086 aa8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 TRIM35Q9UPQ4 493 aa8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 NSD2O96028 1365 aa8.9□□□□□ -0.98
NEUROD4-201ENST00000242994 XRCC6P12956 609 aaKnown RBP eCLIP8.9□□□□□ -0.99
NEUROD4-201ENST00000242994 CASTP20810 708 aaKnown RBP8.9□□□□□ -0.99
NEUROD4-201ENST00000242994 CDK11BP21127 795 aaKnown RBP8.9□□□□□ -0.99
NEUROD4-201ENST00000242994 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.9□□□□□ -0.99
NEUROD4-201ENST00000242994 STK11IPQ8N1F8 1099 aa8.9□□□□□ -0.99
NEUROD4-201ENST00000242994 JARID2Q92833 1246 aaPredicted RBP8.9□□□□□ -0.99
NEUROD4-201ENST00000242994 BLMP54132 1417 aaPredicted RBP8.9□□□□□ -0.99
NEUROD4-201ENST00000242994 PRKCSHP14314 528 aaPredicted RBP8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 ATF3P18847 181 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 CCDC173Q0VFZ6 552 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 MRPL50Q8N5N7 158 aaKnown RBP8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 TSPY26PQ9H489 355 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 CWC22Q9HCG8 908 aaKnown RBP8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 STRN4Q9NRL3 753 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 EIF2AK4Q9P2K8 1649 aaKnown RBP8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 MCM2P49736 904 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 EIF4A2Q14240 407 aaKnown RBP8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 CCDC83Q8IWF9 413 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 RASSF8Q8NHQ8 419 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 CCDC8Q9H0W5 538 aaPredicted RBP8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 BOLA2Q9H3K6 86 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 WDR7Q9Y4E6 1490 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 TTC22Q5TAA0 569 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 SASS6Q6UVJ0 657 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 SMC5Q8IY18 1101 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 CYP46A1Q9Y6A2 500 aa8.89□□□□□ -0.99
NEUROD4-201ENST00000242994 BAG4O95429 457 aaKnown RBP8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 PRPF40BQ6NWY9 871 aaKnown RBP8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 ATP2B1P20020 1258 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 LARP1BQ659C4 914 aaKnown RBP8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 DDX11Q96FC9 970 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 KAT6BQ8WYB5 2073 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 PI4KAP2A4QPH2 592 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 PES1O00541 588 aaKnown RBP8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 PI4KAP1Q8N8J0 262 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 TCEANC2Q96MN5 208 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 UGGT1Q9NYU2 1555 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 IL16Q14005 1332 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 PTCD1O75127 700 aaKnown RBP8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 SDF4Q9BRK5 362 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 TRIM5Q9C035 493 aa8.88□□□□□ -0.99
NEUROD4-201ENST00000242994 BCORL1Q5H9F3 1711 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 PTPRTO14522 1441 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 WDR33Q9C0J8 1336 aaKnown RBP8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 CCAR2Q8N163 923 aaKnown RBP8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 ZGPATQ8N5A5 531 aaKnown RBP8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 PPIP5K1Q6PFW1 1433 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 ZNF518AQ6AHZ1 1483 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 TPM4P67936 248 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 PPP1R42Q7Z4L9 355 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 RALYLQ86SE5 291 aaKnown RBP8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 MAST1Q9Y2H9 1570 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 TRDNQ13061 729 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 CAMK4Q16566 473 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 NFXL1Q6ZNB6 911 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 CCDC73Q6ZRK6 1079 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 KIF1BPQ96EK5 621 aa8.87□□□□□ -0.99
NEUROD4-201ENST00000242994 TTC21BQ7Z4L5 1316 aa8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 PSMA5P28066 241 aa8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 PIP4K2AP48426 406 aaPredicted RBP8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 BLOC1S2Q6QNY1 142 aa8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 G2E3Q7L622 706 aa8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 ABCC2Q92887 1545 aa8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 MTHFSDQ2M296 383 aaKnown RBP8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 PDRG1Q9NUG6 133 aa8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 CCDC39Q9UFE4 941 aa8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 PLA2R1Q13018 1463 aa8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 ZBTB7BO15156 539 aaPredicted RBP8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 FKBP4Q02790 459 aaKnown RBP eCLIP8.86□□□□□ -0.99
NEUROD4-201ENST00000242994 TATP17735 454 aaPredicted RBP8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 PDE1AP54750 535 aa8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 ANKRD44Q8N8A2 993 aa8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 DNAAF4Q8WXU2 420 aa8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 CPLX2Q6PUV4 134 aaKnown RBP8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 MTMR7Q9Y216 660 aa8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 PLEKHM2Q8IWE5 1019 aa8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 PHF8Q9UPP1 1060 aa8.85□□□□□ -0.99
NEUROD4-201ENST00000242994 ADGBQ8N7X0 1667 aa8.84□□□□□ -0.99
NEUROD4-201ENST00000242994 RAB11FIP3O75154 756 aa8.84□□□□□ -0.99
NEUROD4-201ENST00000242994 CABP4P57796 275 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms