RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 MCM10Q7L590 875 aa30.64■■■□□ 2.5
RRP9-201ENST00000232888 KIAA0232Q92628 1395 aa30.63■■■□□ 2.49
RRP9-201ENST00000232888 CRBNQ96SW2 442 aa30.63■■■□□ 2.49
RRP9-201ENST00000232888 LMO7Q8WWI1 1683 aa30.63■■■□□ 2.49
RRP9-201ENST00000232888 CANXP27824 592 aaKnown RBP30.62■■■□□ 2.49
RRP9-201ENST00000232888 HAP1P54257 671 aaPredicted RBP30.62■■■□□ 2.49
RRP9-201ENST00000232888 CCDC136Q96JN2 1154 aa30.62■■■□□ 2.49
RRP9-201ENST00000232888 C20orf194Q5TEA3 1177 aa30.62■■■□□ 2.49
RRP9-201ENST00000232888 FAM208AQ9UK61 1670 aaKnown RBP30.61■■■□□ 2.49
RRP9-201ENST00000232888 AHDC1Q5TGY3 1603 aaPredicted RBP30.61■■■□□ 2.49
RRP9-201ENST00000232888 MS4A1P11836 297 aa30.61■■■□□ 2.49
RRP9-201ENST00000232888 BABAM1Q9NWV8 329 aa30.61■■■□□ 2.49
RRP9-201ENST00000232888 BRPF1P55201 1214 aaPredicted RBP30.6■■■□□ 2.49
RRP9-201ENST00000232888 B4GALNT3Q6L9W6 998 aa30.6■■■□□ 2.49
RRP9-201ENST00000232888 RGPD2P0DJD1 1756 aa30.59■■■□□ 2.49
RRP9-201ENST00000232888 SMC4Q9NTJ3 1288 aa30.58■■■□□ 2.49
RRP9-201ENST00000232888 RGPD5Q99666 1765 aa30.58■■■□□ 2.49
RRP9-201ENST00000232888 ROBO1Q9Y6N7 1651 aa30.58■■■□□ 2.49
RRP9-201ENST00000232888 VAMP4O75379 141 aa30.58■■■□□ 2.49
RRP9-201ENST00000232888 SSH1Q8WYL5 1049 aa30.57■■■□□ 2.48
RRP9-201ENST00000232888 LRRC37A3O60309 1634 aa30.56■■■□□ 2.48
RRP9-201ENST00000232888 PRDM11Q9NQV5 511 aa30.56■■■□□ 2.48
RRP9-201ENST00000232888 AAMPQ13685 434 aa30.55■■■□□ 2.48
RRP9-201ENST00000232888 CHRNA2Q15822 529 aa30.55■■■□□ 2.48
RRP9-201ENST00000232888 AKAP4Q5JQC9 854 aa30.55■■■□□ 2.48
RRP9-201ENST00000232888 ZKSCAN2Q63HK3 967 aa30.55■■■□□ 2.48
RRP9-201ENST00000232888 FRAT1Q92837 279 aaPredicted RBP30.55■■■□□ 2.48
RRP9-201ENST00000232888 KIF16BQ96L93 1317 aa30.55■■■□□ 2.48
RRP9-201ENST00000232888 NLRP2Q9NX02 1062 aa30.55■■■□□ 2.48
RRP9-201ENST00000232888 CSB-PGBD3P0DP91 1061 aa30.54■■■□□ 2.48
RRP9-201ENST00000232888 TWISTNBQ3B726 338 aaPredicted RBP30.54■■■□□ 2.48
RRP9-201ENST00000232888 ABCA3Q99758 1704 aa30.54■■■□□ 2.48
RRP9-201ENST00000232888 IPO8O15397 1037 aaKnown RBP30.54■■■□□ 2.48
RRP9-201ENST00000232888 IL17REQ8NFR9 667 aa30.53■■■□□ 2.48
RRP9-201ENST00000232888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.53■■■□□ 2.48
RRP9-201ENST00000232888 RAPGEF4Q8WZA2 1011 aa30.52■■■□□ 2.48
RRP9-201ENST00000232888 BCL2L13Q9BXK5 485 aa30.52■■■□□ 2.48
RRP9-201ENST00000232888 CEMIPQ8WUJ3 1361 aa30.51■■■□□ 2.48
RRP9-201ENST00000232888 ZNF530Q6P9A1 599 aaPredicted RBP30.51■■■□□ 2.47
RRP9-201ENST00000232888 OVOS2A0A0G2JMS6 1433 aa30.51■■■□□ 2.47
RRP9-201ENST00000232888 C8orf58Q8NAV2 365 aa30.5■■■□□ 2.47
RRP9-201ENST00000232888 TSPYL4Q9UJ04 414 aa30.5■■■□□ 2.47
RRP9-201ENST00000232888 TOM1O60784 492 aa30.49■■■□□ 2.47
RRP9-201ENST00000232888 TAF7Q15545 349 aaPredicted RBP30.49■■■□□ 2.47
RRP9-201ENST00000232888 C1orf141Q5JVX7 400 aa30.49■■■□□ 2.47
RRP9-201ENST00000232888 TSPYL6Q8N831 410 aa30.49■■■□□ 2.47
RRP9-201ENST00000232888 SOS1Q07889 1333 aaPredicted RBP30.48■■■□□ 2.47
RRP9-201ENST00000232888 TATP17735 454 aaPredicted RBP30.48■■■□□ 2.47
RRP9-201ENST00000232888 WDR17Q8IZU2 1322 aa30.47■■■□□ 2.47
RRP9-201ENST00000232888 ARHGAP45Q92619 1136 aa30.47■■■□□ 2.47
RRP9-201ENST00000232888 ATF7IPQ6VMQ6 1270 aa30.46■■■□□ 2.47
RRP9-201ENST00000232888 COL22A1Q8NFW1 1626 aaPredicted RBP30.46■■■□□ 2.47
RRP9-201ENST00000232888 SPG7Q9UQ90 795 aa30.45■■■□□ 2.47
RRP9-201ENST00000232888 DZIP1LQ8IYY4 767 aaKnown RBP30.45■■■□□ 2.46
RRP9-201ENST00000232888 MRPL50Q8N5N7 158 aaKnown RBP30.45■■■□□ 2.46
RRP9-201ENST00000232888 PANK1Q8TE04 598 aa30.44■■■□□ 2.46
RRP9-201ENST00000232888 NOB1Q9ULX3 412 aaKnown RBP30.44■■■□□ 2.46
RRP9-201ENST00000232888 COL5A2P05997 1499 aaPredicted RBP30.43■■■□□ 2.46
RRP9-201ENST00000232888 FTSJ3Q8IY81 847 aaKnown RBP30.43■■■□□ 2.46
RRP9-201ENST00000232888 ELL2O00472 640 aaPredicted RBP30.41■■■□□ 2.46
RRP9-201ENST00000232888 TRIM27P14373 513 aa30.41■■■□□ 2.46
RRP9-201ENST00000232888 COG6Q9Y2V7 657 aa30.41■■■□□ 2.46
RRP9-201ENST00000232888 RNMTO43148 476 aaKnown RBP30.4■■■□□ 2.46
RRP9-201ENST00000232888 CARD10Q9BWT7 1032 aa30.39■■■□□ 2.46
RRP9-201ENST00000232888 RLBP1P12271 317 aa30.38■■■□□ 2.45
RRP9-201ENST00000232888 TEFQ10587 303 aa30.38■■■□□ 2.45
RRP9-201ENST00000232888 MVPQ14764 893 aaKnown RBP30.38■■■□□ 2.45
RRP9-201ENST00000232888 MIS18AQ9NYP9 233 aa30.38■■■□□ 2.45
RRP9-201ENST00000232888 MEGF6O75095 1541 aa30.38■■■□□ 2.45
RRP9-201ENST00000232888 LGR6Q9HBX8 967 aa30.37■■■□□ 2.45
RRP9-201ENST00000232888 TOM1L2Q6ZVM7 507 aa30.37■■■□□ 2.45
RRP9-201ENST00000232888 CHMP4AQ9BY43 222 aa30.37■■■□□ 2.45
RRP9-201ENST00000232888 ADAMTS7Q9UKP4 1686 aa30.36■■■□□ 2.45
RRP9-201ENST00000232888 EVA1CP58658 441 aa30.35■■■□□ 2.45
RRP9-201ENST00000232888 IFNL2Q8IZJ0 200 aa30.35■■■□□ 2.45
RRP9-201ENST00000232888 CLUAP1Q96AJ1 413 aa30.35■■■□□ 2.45
RRP9-201ENST00000232888 PHLPP1O60346 1717 aa30.35■■■□□ 2.45
RRP9-201ENST00000232888 COL16A1Q07092 1604 aaPredicted RBP30.34■■■□□ 2.45
RRP9-201ENST00000232888 MPRIPQ6WCQ1 1025 aa30.34■■■□□ 2.45
RRP9-201ENST00000232888 API5Q9BZZ5 524 aaKnown RBP30.34■■■□□ 2.45
RRP9-201ENST00000232888 HSP90AB1P08238 724 aaKnown RBP30.33■■■□□ 2.45
RRP9-201ENST00000232888 DDX19BQ9UMR2 479 aa30.33■■■□□ 2.45
RRP9-201ENST00000232888 COL14A1Q05707 1796 aaKnown RBP30.33■■■□□ 2.45
RRP9-201ENST00000232888 PKD1L3Q7Z443 1732 aa30.33■■■□□ 2.45
RRP9-201ENST00000232888 KRT24Q2M2I5 525 aa30.32■■■□□ 2.45
RRP9-201ENST00000232888 AEBP2Q6ZN18 517 aaPredicted RBP30.32■■■□□ 2.45
RRP9-201ENST00000232888 TNNQ9UQP3 1299 aa30.32■■■□□ 2.45
RRP9-201ENST00000232888 PHKG2P15735 406 aa30.32■■■□□ 2.44
RRP9-201ENST00000232888 HOXB7P09629 217 aa30.31■■■□□ 2.44
RRP9-201ENST00000232888 CHMP4BQ9H444 224 aaKnown RBP30.31■■■□□ 2.44
RRP9-201ENST00000232888 CENPQQ7L2Z9 268 aaPredicted RBP30.3■■■□□ 2.44
RRP9-201ENST00000232888 PARP4Q9UKK3 1724 aaKnown RBP30.29■■■□□ 2.44
RRP9-201ENST00000232888 PTPRCP08575 1304 aa30.29■■■□□ 2.44
RRP9-201ENST00000232888 BTBD11A6QL63 1104 aa30.28■■■□□ 2.44
RRP9-201ENST00000232888 CCDC30Q5VVM6 783 aa30.28■■■□□ 2.44
RRP9-201ENST00000232888 DCAF5Q96JK2 942 aa30.28■■■□□ 2.44
RRP9-201ENST00000232888 KDM3BQ7LBC6 1761 aa30.27■■■□□ 2.44
RRP9-201ENST00000232888 KDM2BQ8NHM5 1336 aa30.27■■■□□ 2.44
RRP9-201ENST00000232888 UBAP1LF5GYI3 381 aa30.27■■■□□ 2.44
RRP9-201ENST00000232888 IL2RBP14784 551 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms