RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
COPS7A-201ENST00000229251 USP31Q70CQ4 1352 aa17.03■□□□□ 0.32
COPS7A-201ENST00000229251 CT47B1P0C2W7 299 aaPredicted RBP17.03■□□□□ 0.32
COPS7A-201ENST00000229251 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
COPS7A-201ENST00000229251 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
COPS7A-201ENST00000229251 KIAA0232Q92628 1395 aa17.02■□□□□ 0.31
COPS7A-201ENST00000229251 RGPD3A6NKT7 1758 aaPredicted RBP17.02■□□□□ 0.31
COPS7A-201ENST00000229251 RGPD4Q7Z3J3 1758 aa17.02■□□□□ 0.31
COPS7A-201ENST00000229251 PHRF1Q9P1Y6 1649 aaKnown RBP17.02■□□□□ 0.31
COPS7A-201ENST00000229251 NEFMP07197 916 aa17.01■□□□□ 0.31
COPS7A-201ENST00000229251 TMPOP42166 694 aaKnown RBP17.01■□□□□ 0.31
COPS7A-201ENST00000229251 STRN4Q9NRL3 753 aa17.01■□□□□ 0.31
COPS7A-201ENST00000229251 ZNF784Q8NCA9 323 aaPredicted RBP17.01■□□□□ 0.31
COPS7A-201ENST00000229251 PIK3C2AO00443 1686 aa17■□□□□ 0.31
COPS7A-201ENST00000229251 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
COPS7A-201ENST00000229251 RSPH6AQ9H0K4 717 aa16.99■□□□□ 0.31
COPS7A-201ENST00000229251 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
COPS7A-201ENST00000229251 CHD4Q14839 1912 aa16.99■□□□□ 0.31
COPS7A-201ENST00000229251 IL13P35225 146 aa16.99■□□□□ 0.31
COPS7A-201ENST00000229251 NEUROD2Q15784 382 aa16.99■□□□□ 0.31
COPS7A-201ENST00000229251 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
COPS7A-201ENST00000229251 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
COPS7A-201ENST00000229251 USP35Q9P2H5 1018 aa16.99■□□□□ 0.31
COPS7A-201ENST00000229251 CASZ1Q86V15 1759 aa16.98■□□□□ 0.31
COPS7A-201ENST00000229251 PLIN1O60240 522 aa16.98■□□□□ 0.31
COPS7A-201ENST00000229251 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
COPS7A-201ENST00000229251 EVA1CP58658 441 aa16.97■□□□□ 0.31
COPS7A-201ENST00000229251 IFFO2Q5TF58 517 aa16.97■□□□□ 0.31
COPS7A-201ENST00000229251 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
COPS7A-201ENST00000229251 EMILIN1Q9Y6C2 1016 aa16.97■□□□□ 0.31
COPS7A-201ENST00000229251 DLG5Q8TDM6 1919 aa16.97■□□□□ 0.31
COPS7A-201ENST00000229251 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
COPS7A-201ENST00000229251 PARP4Q9UKK3 1724 aaKnown RBP16.96■□□□□ 0.31
COPS7A-201ENST00000229251 PEAK1Q9H792 1746 aa16.96■□□□□ 0.31
COPS7A-201ENST00000229251 AAMPQ13685 434 aa16.96■□□□□ 0.3
COPS7A-201ENST00000229251 TRIM35Q9UPQ4 493 aa16.96■□□□□ 0.3
COPS7A-201ENST00000229251 PPM1GO15355 546 aaPredicted RBP16.95■□□□□ 0.3
COPS7A-201ENST00000229251 CALD1Q05682 793 aaKnown RBP16.95■□□□□ 0.3
COPS7A-201ENST00000229251 THRAP3Q9Y2W1 955 aaKnown RBP16.95■□□□□ 0.3
COPS7A-201ENST00000229251 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
COPS7A-201ENST00000229251 PRKAR2BP31323 418 aa16.93■□□□□ 0.3
COPS7A-201ENST00000229251 RIPK4P57078 832 aa16.93■□□□□ 0.3
COPS7A-201ENST00000229251 C1QTNF8P60827 252 aa16.93■□□□□ 0.3
COPS7A-201ENST00000229251 SBF2Q86WG5 1849 aa16.93■□□□□ 0.3
COPS7A-201ENST00000229251 PLSCR1O15162 318 aa16.93■□□□□ 0.3
COPS7A-201ENST00000229251 RARSP54136 660 aaKnown RBP16.93■□□□□ 0.3
COPS7A-201ENST00000229251 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
COPS7A-201ENST00000229251 NFE2L2Q16236 605 aa16.93■□□□□ 0.3
COPS7A-201ENST00000229251 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
COPS7A-201ENST00000229251 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
COPS7A-201ENST00000229251 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
COPS7A-201ENST00000229251 C20orf194Q5TEA3 1177 aa16.92■□□□□ 0.3
COPS7A-201ENST00000229251 LMO7Q8WWI1 1683 aa16.91■□□□□ 0.3
COPS7A-201ENST00000229251 LARP1Q6PKG0 1096 aaKnown RBP16.91■□□□□ 0.3
COPS7A-201ENST00000229251 FLT4P35916 1363 aa16.91■□□□□ 0.3
COPS7A-201ENST00000229251 BCAR3O75815 825 aa16.9■□□□□ 0.3
COPS7A-201ENST00000229251 RRS1Q15050 365 aaKnown RBP16.9■□□□□ 0.3
COPS7A-201ENST00000229251 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
COPS7A-201ENST00000229251 FBLN1P23142 703 aa16.9■□□□□ 0.3
COPS7A-201ENST00000229251 ANO8Q9HCE9 1232 aaPredicted RBP16.9■□□□□ 0.3
COPS7A-201ENST00000229251 CPDO75976 1380 aa16.89■□□□□ 0.29
COPS7A-201ENST00000229251 MS4A1P11836 297 aa16.88■□□□□ 0.29
COPS7A-201ENST00000229251 CENPQQ7L2Z9 268 aaPredicted RBP16.87■□□□□ 0.29
COPS7A-201ENST00000229251 KDM2BQ8NHM5 1336 aa16.87■□□□□ 0.29
COPS7A-201ENST00000229251 TCERG1O14776 1098 aaKnown RBP16.87■□□□□ 0.29
COPS7A-201ENST00000229251 ZBTB7AO95365 584 aa16.87■□□□□ 0.29
COPS7A-201ENST00000229251 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
COPS7A-201ENST00000229251 PTGER2P43116 358 aa16.87■□□□□ 0.29
COPS7A-201ENST00000229251 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
COPS7A-201ENST00000229251 BCL11BQ9C0K0 894 aaPredicted RBP16.87■□□□□ 0.29
COPS7A-201ENST00000229251 RTL1A6NKG5 1358 aa16.86■□□□□ 0.29
COPS7A-201ENST00000229251 HMOX1P09601 288 aa16.86■□□□□ 0.29
COPS7A-201ENST00000229251 NUTM2GQ5VZR2 741 aa16.86■□□□□ 0.29
COPS7A-201ENST00000229251 SYT17Q9BSW7 474 aa16.86■□□□□ 0.29
COPS7A-201ENST00000229251 LRRC37A3O60309 1634 aa16.86■□□□□ 0.29
COPS7A-201ENST00000229251 KDRP35968 1356 aa16.85■□□□□ 0.29
COPS7A-201ENST00000229251 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
COPS7A-201ENST00000229251 COL5A2P05997 1499 aaPredicted RBP16.85■□□□□ 0.29
COPS7A-201ENST00000229251 LTN1O94822 1766 aa16.85■□□□□ 0.29
COPS7A-201ENST00000229251 PHACTR3Q96KR7 559 aa16.84■□□□□ 0.29
COPS7A-201ENST00000229251 FHDC1Q9C0D6 1143 aaPredicted RBP16.84■□□□□ 0.29
COPS7A-201ENST00000229251 IFT57Q9NWB7 429 aa16.84■□□□□ 0.29
COPS7A-201ENST00000229251 CRB1P82279 1406 aa16.84■□□□□ 0.29
COPS7A-201ENST00000229251 GNAI1P63096 354 aa16.84■□□□□ 0.29
COPS7A-201ENST00000229251 ALDH1L2Q3SY69 923 aa16.84■□□□□ 0.29
COPS7A-201ENST00000229251 PDGFDQ9GZP0 370 aaPredicted RBP16.84■□□□□ 0.29
COPS7A-201ENST00000229251 EXOSC9Q06265 439 aaKnown RBP16.83■□□□□ 0.28
COPS7A-201ENST00000229251 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
COPS7A-201ENST00000229251 USP19O94966 1318 aa16.83■□□□□ 0.28
COPS7A-201ENST00000229251 BRPF1P55201 1214 aaPredicted RBP16.82■□□□□ 0.28
COPS7A-201ENST00000229251 TSR2Q969E8 191 aaKnown RBP16.82■□□□□ 0.28
COPS7A-201ENST00000229251 STK32BQ9NY57 414 aa16.82■□□□□ 0.28
COPS7A-201ENST00000229251 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
COPS7A-201ENST00000229251 NLRP6P59044 892 aa16.82■□□□□ 0.28
COPS7A-201ENST00000229251 DDB1Q16531 1140 aa16.82■□□□□ 0.28
COPS7A-201ENST00000229251 ZKSCAN2Q63HK3 967 aa16.82■□□□□ 0.28
COPS7A-201ENST00000229251 ABTB2Q8N961 1025 aa16.82■□□□□ 0.28
COPS7A-201ENST00000229251 MTFR1LQ9H019 292 aa16.82■□□□□ 0.28
COPS7A-201ENST00000229251 NFAT5O94916 1531 aa16.81■□□□□ 0.28
COPS7A-201ENST00000229251 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms