RNA–Protein interactions for RNA: ENST00000228955.11

GTF2H3-201, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2 BASIC

Gene GTF2H3, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-201ENST00000228955 NBPF4Q96M43 638 aa9.53□□□□□ -0.88
GTF2H3-201ENST00000228955 RGPD2P0DJD1 1756 aa9.52□□□□□ -0.88
GTF2H3-201ENST00000228955 PRIM1P49642 420 aaKnown RBP9.52□□□□□ -0.89
GTF2H3-201ENST00000228955 TXNRD1Q16881 649 aa9.52□□□□□ -0.89
GTF2H3-201ENST00000228955 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
GTF2H3-201ENST00000228955 ANKRD36BQ8N2N9 1353 aa9.51□□□□□ -0.89
GTF2H3-201ENST00000228955 NSD3Q9BZ95 1437 aa9.51□□□□□ -0.89
GTF2H3-201ENST00000228955 CCDC7Q96M83 1385 aa9.51□□□□□ -0.89
GTF2H3-201ENST00000228955 DISP2A7MBM2 1401 aa9.51□□□□□ -0.89
GTF2H3-201ENST00000228955 NUP188Q5SRE5 1749 aa9.5□□□□□ -0.89
GTF2H3-201ENST00000228955 C11orf95C9JLR9 678 aaPredicted RBP9.5□□□□□ -0.89
GTF2H3-201ENST00000228955 SMIM5Q71RC9 77 aa9.5□□□□□ -0.89
GTF2H3-201ENST00000228955 CDCA7Q9BWT1 371 aaPredicted RBP9.5□□□□□ -0.89
GTF2H3-201ENST00000228955 SBF2Q86WG5 1849 aa9.5□□□□□ -0.89
GTF2H3-201ENST00000228955 WNK3Q9BYP7 1800 aa9.5□□□□□ -0.89
GTF2H3-201ENST00000228955 PEAK1Q9H792 1746 aa9.49□□□□□ -0.89
GTF2H3-201ENST00000228955 ZCRB1Q8TBF4 217 aaKnown RBP9.49□□□□□ -0.89
GTF2H3-201ENST00000228955 PANK3Q9H999 370 aa9.49□□□□□ -0.89
GTF2H3-201ENST00000228955 STK32BQ9NY57 414 aa9.49□□□□□ -0.89
GTF2H3-201ENST00000228955 LRRC4BQ9NT99 713 aa9.48□□□□□ -0.89
GTF2H3-201ENST00000228955 TNS2Q63HR2 1409 aa9.48□□□□□ -0.89
GTF2H3-201ENST00000228955 PLSCR1O15162 318 aa9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 EIF4G2P78344 907 aaKnown RBP eCLIP9.47□□□□□ -0.894e-8■■■■■ 34
GTF2H3-201ENST00000228955 ZNF827Q17R98 1081 aa9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 RAPGEF4Q8WZA2 1011 aa9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 SPON1Q9HCB6 807 aa9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 RREB1Q92766 1687 aa9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 MEGF6O75095 1541 aa9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 TATP17735 454 aaPredicted RBP9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 MPRIPQ6WCQ1 1025 aa9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 PUS7Q96PZ0 661 aaKnown RBP9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 ZBTB12Q9Y330 459 aaPredicted RBP9.47□□□□□ -0.89
GTF2H3-201ENST00000228955 SLC15A2Q16348 729 aa9.46□□□□□ -0.9
GTF2H3-201ENST00000228955 MSL1Q68DK7 614 aa9.46□□□□□ -0.9
GTF2H3-201ENST00000228955 PELP1Q8IZL8 1130 aaKnown RBP9.46□□□□□ -0.9
GTF2H3-201ENST00000228955 WWC3Q9ULE0 1092 aa9.46□□□□□ -0.9
GTF2H3-201ENST00000228955 NINLQ9Y2I6 1382 aa9.45□□□□□ -0.9
GTF2H3-201ENST00000228955 KIF20BQ96Q89 1820 aa9.45□□□□□ -0.9
GTF2H3-201ENST00000228955 PARD3Q8TEW0 1356 aa9.44□□□□□ -0.9
GTF2H3-201ENST00000228955 MYOM1P52179 1685 aa9.44□□□□□ -0.9
GTF2H3-201ENST00000228955 TFCP2L1Q9NZI6 479 aa9.44□□□□□ -0.9
GTF2H3-201ENST00000228955 BTAF1O14981 1849 aa9.44□□□□□ -0.9
GTF2H3-201ENST00000228955 SMG6Q86US8 1419 aaKnown RBP9.44□□□□□ -0.9
GTF2H3-201ENST00000228955 CGNL1Q0VF96 1302 aa9.43□□□□□ -0.9
GTF2H3-201ENST00000228955 MORC1Q86VD1 984 aa9.43□□□□□ -0.9
GTF2H3-201ENST00000228955 EYA1Q99502 592 aa9.43□□□□□ -0.9
GTF2H3-201ENST00000228955 POLKQ9UBT6 870 aa9.43□□□□□ -0.9
GTF2H3-201ENST00000228955 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
GTF2H3-201ENST00000228955 SLC24A1O60721 1099 aa9.42□□□□□ -0.9
GTF2H3-201ENST00000228955 PHF14O94880 888 aa9.42□□□□□ -0.9
GTF2H3-201ENST00000228955 CC2D1BQ5T0F9 858 aaKnown RBP9.42□□□□□ -0.9
GTF2H3-201ENST00000228955 FHDC1Q9C0D6 1143 aaPredicted RBP9.42□□□□□ -0.9
GTF2H3-201ENST00000228955 CCNL1Q9UK58 526 aaPredicted RBP9.42□□□□□ -0.9
GTF2H3-201ENST00000228955 LRP5O75197 1615 aa9.42□□□□□ -0.9
GTF2H3-201ENST00000228955 FLT4P35916 1363 aa9.42□□□□□ -0.9
GTF2H3-201ENST00000228955 CYP27B1O15528 508 aa9.41□□□□□ -0.9
GTF2H3-201ENST00000228955 EIF4A2Q14240 407 aaKnown RBP9.41□□□□□ -0.9
GTF2H3-201ENST00000228955 DOT1LQ8TEK3 1739 aa9.41□□□□□ -0.9
GTF2H3-201ENST00000228955 ABCC6O95255 1503 aa9.41□□□□□ -0.9
GTF2H3-201ENST00000228955 NHSQ6T4R5 1651 aa9.41□□□□□ -0.9
GTF2H3-201ENST00000228955 FAM208AQ9UK61 1670 aaKnown RBP9.41□□□□□ -0.9
GTF2H3-201ENST00000228955 PTGER2P43116 358 aa9.4□□□□□ -0.9
GTF2H3-201ENST00000228955 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
GTF2H3-201ENST00000228955 TIMELESSQ9UNS1 1208 aa9.4□□□□□ -0.9
GTF2H3-201ENST00000228955 MAP2P11137 1827 aaKnown RBP9.4□□□□□ -0.9
GTF2H3-201ENST00000228955 INSRP06213 1382 aa9.4□□□□□ -0.9
GTF2H3-201ENST00000228955 YY1P25490 414 aa9.4□□□□□ -0.91
GTF2H3-201ENST00000228955 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
GTF2H3-201ENST00000228955 CLSPNQ9HAW4 1339 aa9.39□□□□□ -0.91
GTF2H3-201ENST00000228955 PIGBQ92521 554 aa9.39□□□□□ -0.91
GTF2H3-201ENST00000228955 ASAP1Q9ULH1 1129 aa9.39□□□□□ -0.91
GTF2H3-201ENST00000228955 KNSTRNQ9Y448 316 aa9.39□□□□□ -0.91
GTF2H3-201ENST00000228955 NSD2O96028 1365 aa9.39□□□□□ -0.91
GTF2H3-201ENST00000228955 SHANK3Q9BYB0 1731 aa9.39□□□□□ -0.91
GTF2H3-201ENST00000228955 KIF7Q2M1P5 1343 aa9.38□□□□□ -0.91
GTF2H3-201ENST00000228955 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
GTF2H3-201ENST00000228955 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
GTF2H3-201ENST00000228955 HMOX1P09601 288 aa9.38□□□□□ -0.91
GTF2H3-201ENST00000228955 AMIGO3Q86WK7 504 aa9.38□□□□□ -0.91
GTF2H3-201ENST00000228955 COL23A1Q86Y22 540 aaPredicted RBP9.38□□□□□ -0.91
GTF2H3-201ENST00000228955 AKT1S1Q96B36 256 aa9.38□□□□□ -0.91
GTF2H3-201ENST00000228955 ARXQ96QS3 562 aa9.38□□□□□ -0.91
GTF2H3-201ENST00000228955 PNPLA7Q6ZV29 1317 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 UTRNP46939 3433 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 NLGN2Q8NFZ4 835 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 SYT17Q9BSW7 474 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 MTFR1LQ9H019 292 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 SPG7Q9UQ90 795 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 BCL9O00512 1426 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 WASHC2AQ641Q2 1341 aa9.37□□□□□ -0.91
GTF2H3-201ENST00000228955 PALLDQ8WX93 1383 aa9.36□□□□□ -0.91
GTF2H3-201ENST00000228955 GPR162Q16538 588 aa9.36□□□□□ -0.91
GTF2H3-201ENST00000228955 SULT6B1Q6IMI4 303 aa9.36□□□□□ -0.91
GTF2H3-201ENST00000228955 ZNF530Q6P9A1 599 aaPredicted RBP9.36□□□□□ -0.91
GTF2H3-201ENST00000228955 TMOD3Q9NYL9 352 aa9.36□□□□□ -0.91
GTF2H3-201ENST00000228955 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
GTF2H3-201ENST00000228955 PHKG2P15735 406 aa9.35□□□□□ -0.91
GTF2H3-201ENST00000228955 SLC27A3Q5K4L6 730 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms