RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 CDK12Q9NYV4 1490 aaPredicted RBP14.87□□□□□ -0.03
TNFAIP1-201ENST00000226225 ITSN1Q15811 1721 aa14.87□□□□□ -0.03
TNFAIP1-201ENST00000226225 PLEKHO1Q53GL0 409 aaPredicted RBP14.86□□□□□ -0.03
TNFAIP1-201ENST00000226225 GNAT3A8MTJ3 354 aa14.86□□□□□ -0.03
TNFAIP1-201ENST00000226225 NALCNQ8IZF0 1738 aa14.85□□□□□ -0.03
TNFAIP1-201ENST00000226225 KRT24Q2M2I5 525 aa14.85□□□□□ -0.03
TNFAIP1-201ENST00000226225 MBIPQ9NS73 344 aa14.85□□□□□ -0.03
TNFAIP1-201ENST00000226225 KIAA0232Q92628 1395 aa14.85□□□□□ -0.03
TNFAIP1-201ENST00000226225 USP32Q8NFA0 1604 aa14.85□□□□□ -0.03
TNFAIP1-201ENST00000226225 SLKQ9H2G2 1235 aaPredicted RBP14.85□□□□□ -0.03
TNFAIP1-201ENST00000226225 LRRC7Q96NW7 1537 aa14.84□□□□□ -0.03
TNFAIP1-201ENST00000226225 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
TNFAIP1-201ENST00000226225 RARSP54136 660 aaKnown RBP14.84□□□□□ -0.03
TNFAIP1-201ENST00000226225 TWISTNBQ3B726 338 aaPredicted RBP14.84□□□□□ -0.03
TNFAIP1-201ENST00000226225 DDX54Q8TDD1 881 aaKnown RBP14.84□□□□□ -0.03
TNFAIP1-201ENST00000226225 MAP2P11137 1827 aaKnown RBP14.83□□□□□ -0.03
TNFAIP1-201ENST00000226225 MS4A1P11836 297 aa14.83□□□□□ -0.04
TNFAIP1-201ENST00000226225 TSPYL6Q8N831 410 aa14.83□□□□□ -0.04
TNFAIP1-201ENST00000226225 SPRYD3Q8NCJ5 442 aa14.83□□□□□ -0.04
TNFAIP1-201ENST00000226225 IGSF1Q8N6C5 1336 aa14.83□□□□□ -0.04
TNFAIP1-201ENST00000226225 EIF2S2P20042 333 aaKnown RBP14.83□□□□□ -0.04
TNFAIP1-201ENST00000226225 SSH1Q8WYL5 1049 aa14.83□□□□□ -0.04
TNFAIP1-201ENST00000226225 ARHGEF10O15013 1369 aa14.82□□□□□ -0.04
TNFAIP1-201ENST00000226225 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
TNFAIP1-201ENST00000226225 CFAP44Q96MT7 982 aa14.82□□□□□ -0.04
TNFAIP1-201ENST00000226225 KIF20BQ96Q89 1820 aa14.81□□□□□ -0.04
TNFAIP1-201ENST00000226225 IFT57Q9NWB7 429 aa14.81□□□□□ -0.04
TNFAIP1-201ENST00000226225 COL3A1P02461 1466 aaPredicted RBP14.81□□□□□ -0.04
TNFAIP1-201ENST00000226225 FMN2Q9NZ56 1722 aa14.81□□□□□ -0.04
TNFAIP1-201ENST00000226225 ZKSCAN2Q63HK3 967 aa14.8□□□□□ -0.04
TNFAIP1-201ENST00000226225 C8orf58Q8NAV2 365 aa14.8□□□□□ -0.04
TNFAIP1-201ENST00000226225 BTG4Q9NY30 223 aa14.8□□□□□ -0.04
TNFAIP1-201ENST00000226225 TNNQ9UQP3 1299 aa14.8□□□□□ -0.04
TNFAIP1-201ENST00000226225 NCOA3Q9Y6Q9 1424 aa14.8□□□□□ -0.04
TNFAIP1-201ENST00000226225 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
TNFAIP1-201ENST00000226225 NOB1Q9ULX3 412 aaKnown RBP14.8□□□□□ -0.04
TNFAIP1-201ENST00000226225 DCCP43146 1447 aa14.79□□□□□ -0.04
TNFAIP1-201ENST00000226225 IPO8O15397 1037 aaKnown RBP14.79□□□□□ -0.04
TNFAIP1-201ENST00000226225 LGR6Q9HBX8 967 aa14.79□□□□□ -0.04
TNFAIP1-201ENST00000226225 ERBB3P21860 1342 aa14.79□□□□□ -0.04
TNFAIP1-201ENST00000226225 PHF23Q9BUL5 403 aaPredicted RBP14.79□□□□□ -0.04
TNFAIP1-201ENST00000226225 TNS3Q68CZ2 1445 aa14.78□□□□□ -0.04
TNFAIP1-201ENST00000226225 SLC4A10Q6U841 1118 aa14.78□□□□□ -0.04
TNFAIP1-201ENST00000226225 STK31Q9BXU1 1019 aa14.78□□□□□ -0.04
TNFAIP1-201ENST00000226225 MON2Q7Z3U7 1717 aa14.77□□□□□ -0.04
TNFAIP1-201ENST00000226225 IL16Q14005 1332 aa14.77□□□□□ -0.04
TNFAIP1-201ENST00000226225 AMOTQ4VCS5 1084 aa14.77□□□□□ -0.04
TNFAIP1-201ENST00000226225 SPG7Q9UQ90 795 aa14.77□□□□□ -0.04
TNFAIP1-201ENST00000226225 SOS2Q07890 1332 aaPredicted RBP14.77□□□□□ -0.05
TNFAIP1-201ENST00000226225 DZIP1LQ8IYY4 767 aaKnown RBP14.77□□□□□ -0.05
TNFAIP1-201ENST00000226225 IL17REQ8NFR9 667 aa14.77□□□□□ -0.05
TNFAIP1-201ENST00000226225 SYTL4Q96C24 671 aaPredicted RBP14.77□□□□□ -0.05
TNFAIP1-201ENST00000226225 TAF7Q15545 349 aaPredicted RBP14.76□□□□□ -0.05
TNFAIP1-201ENST00000226225 GZF1Q9H116 711 aaPredicted RBP14.76□□□□□ -0.05
TNFAIP1-201ENST00000226225 BTBD11A6QL63 1104 aa14.76□□□□□ -0.05
TNFAIP1-201ENST00000226225 LARP1Q6PKG0 1096 aaKnown RBP14.76□□□□□ -0.05
TNFAIP1-201ENST00000226225 USP19O94966 1318 aa14.76□□□□□ -0.05
TNFAIP1-201ENST00000226225 SLC4A2P04920 1241 aa14.75□□□□□ -0.05
TNFAIP1-201ENST00000226225 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
TNFAIP1-201ENST00000226225 NWD1Q149M9 1564 aa14.75□□□□□ -0.05
TNFAIP1-201ENST00000226225 RTL1A6NKG5 1358 aa14.75□□□□□ -0.05
TNFAIP1-201ENST00000226225 AKAP12Q02952 1782 aa14.74□□□□□ -0.05
TNFAIP1-201ENST00000226225 KIF24Q5T7B8 1368 aa14.74□□□□□ -0.05
TNFAIP1-201ENST00000226225 VAMP4O75379 141 aa14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 NGLY1Q96IV0 654 aa14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 PIK3C2AO00443 1686 aa14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 TOPAZ1Q8N9V7 1692 aa14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 MAP3K5Q99683 1374 aa14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 SLC39A6Q13433 755 aa14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 AKAP4Q5JQC9 854 aa14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 MEX3CQ5U5Q3 659 aaKnown RBP14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 C8orf37Q96NL8 207 aa14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 ZNF330Q9Y3S2 320 aaPredicted RBP14.73□□□□□ -0.05
TNFAIP1-201ENST00000226225 ATF7IPQ6VMQ6 1270 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 UBE2Q2Q8WVN8 375 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 STRCQ7RTU9 1775 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 SHPRHQ149N8 1683 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 CHL1O00533 1208 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 RLBP1P12271 317 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 KIF16BQ96L93 1317 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 CT47B1P0C2W7 299 aaPredicted RBP14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 TRIM27P14373 513 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 C8orf34Q49A92 452 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 TTC5Q8N0Z6 440 aa14.72□□□□□ -0.05
TNFAIP1-201ENST00000226225 IFNL2Q8IZJ0 200 aa14.71□□□□□ -0.05
TNFAIP1-201ENST00000226225 ZNF428Q96B54 188 aa14.71□□□□□ -0.05
TNFAIP1-201ENST00000226225 CABP4P57796 275 aa14.71□□□□□ -0.05
TNFAIP1-201ENST00000226225 FKBP5Q13451 457 aaPredicted RBP14.71□□□□□ -0.05
TNFAIP1-201ENST00000226225 HDGFL1Q5TGJ6 251 aa14.71□□□□□ -0.05
TNFAIP1-201ENST00000226225 NFATC2IPQ8NCF5 419 aa14.71□□□□□ -0.05
TNFAIP1-201ENST00000226225 IQSEC2Q5JU85 1478 aa14.71□□□□□ -0.06
TNFAIP1-201ENST00000226225 PDE3AQ14432 1141 aa14.71□□□□□ -0.06
TNFAIP1-201ENST00000226225 STRCP1A6NGW2 1772 aa14.7□□□□□ -0.06
TNFAIP1-201ENST00000226225 KCNQ3O43525 872 aa14.7□□□□□ -0.06
TNFAIP1-201ENST00000226225 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
TNFAIP1-201ENST00000226225 ZCRB1Q8TBF4 217 aaKnown RBP14.7□□□□□ -0.06
TNFAIP1-201ENST00000226225 ANKRD26Q9UPS8 1709 aa14.69□□□□□ -0.06
TNFAIP1-201ENST00000226225 ANXA1P04083 346 aa14.69□□□□□ -0.06
TNFAIP1-201ENST00000226225 CENPQQ7L2Z9 268 aaPredicted RBP14.69□□□□□ -0.06
TNFAIP1-201ENST00000226225 TMEM57Q8N5G2 664 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms