RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 PRKRIP1Q9H875 184 aaPredicted RBP19.4■□□□□ 0.7
SUPT4H1-201ENST00000225504 HMOX1P09601 288 aa19.39■□□□□ 0.69
SUPT4H1-201ENST00000225504 RGPD1P0DJD0 1748 aa19.38■□□□□ 0.69
SUPT4H1-201ENST00000225504 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
SUPT4H1-201ENST00000225504 U2SURPO15042 1029 aaKnown RBP19.37■□□□□ 0.69
SUPT4H1-201ENST00000225504 TRIM37O94972 964 aa19.37■□□□□ 0.69
SUPT4H1-201ENST00000225504 PTF1AQ7RTS3 328 aa19.37■□□□□ 0.69
SUPT4H1-201ENST00000225504 SHANK3Q9BYB0 1731 aa19.35■□□□□ 0.69
SUPT4H1-201ENST00000225504 MYBBP1AQ9BQG0 1328 aaKnown RBP19.35■□□□□ 0.69
SUPT4H1-201ENST00000225504 CYP27B1O15528 508 aa19.35■□□□□ 0.69
SUPT4H1-201ENST00000225504 KDRP35968 1356 aa19.34■□□□□ 0.69
SUPT4H1-201ENST00000225504 KCNQ2O43526 872 aa19.34■□□□□ 0.69
SUPT4H1-201ENST00000225504 ACSBG1Q96GR2 724 aa19.33■□□□□ 0.68
SUPT4H1-201ENST00000225504 CCDC125Q86Z20 511 aa19.32■□□□□ 0.68
SUPT4H1-201ENST00000225504 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.32■□□□□ 0.687e-8■■□□□ 12.6
SUPT4H1-201ENST00000225504 SPG7Q9UQ90 795 aa19.32■□□□□ 0.68
SUPT4H1-201ENST00000225504 DEFB132Q7Z7B7 95 aa19.31■□□□□ 0.68
SUPT4H1-201ENST00000225504 SBF2Q86WG5 1849 aa19.31■□□□□ 0.68
SUPT4H1-201ENST00000225504 U2AF1L5P0DN76 240 aaPredicted RBP19.3■□□□□ 0.68
SUPT4H1-201ENST00000225504 U2AF1Q01081 240 aaKnown RBP eCLIP19.3■□□□□ 0.682e-7■□□□□ 9.5
SUPT4H1-201ENST00000225504 NUDCQ9Y266 331 aa19.3■□□□□ 0.68
SUPT4H1-201ENST00000225504 PCDH11XQ9BZA7 1347 aa19.3■□□□□ 0.68
SUPT4H1-201ENST00000225504 PCDH11YQ9BZA8 1340 aa19.3■□□□□ 0.68
SUPT4H1-201ENST00000225504 BCL9O00512 1426 aa19.3■□□□□ 0.68
SUPT4H1-201ENST00000225504 PKD1L3Q7Z443 1732 aa19.3■□□□□ 0.68
SUPT4H1-201ENST00000225504 PLEKHO1Q53GL0 409 aaPredicted RBP19.29■□□□□ 0.68
SUPT4H1-201ENST00000225504 CCDC184Q52MB2 194 aa19.28■□□□□ 0.68
SUPT4H1-201ENST00000225504 APBA3O96018 575 aa19.28■□□□□ 0.68
SUPT4H1-201ENST00000225504 PHKG2P15735 406 aa19.28■□□□□ 0.68
SUPT4H1-201ENST00000225504 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
SUPT4H1-201ENST00000225504 SF3B2Q13435 895 aaKnown RBP19.28■□□□□ 0.68
SUPT4H1-201ENST00000225504 BCL11BQ9C0K0 894 aaPredicted RBP19.28■□□□□ 0.68
SUPT4H1-201ENST00000225504 RSPH6AQ9H0K4 717 aa19.28■□□□□ 0.68
SUPT4H1-201ENST00000225504 KAT6BQ8WYB5 2073 aa19.28■□□□□ 0.68
SUPT4H1-201ENST00000225504 ZNF530Q6P9A1 599 aaPredicted RBP19.27■□□□□ 0.67
SUPT4H1-201ENST00000225504 PHACTR3Q96KR7 559 aa19.27■□□□□ 0.67
SUPT4H1-201ENST00000225504 ANP32CO43423 234 aa19.26■□□□□ 0.67
SUPT4H1-201ENST00000225504 PRKAR2BP31323 418 aa19.26■□□□□ 0.67
SUPT4H1-201ENST00000225504 EN1Q05925 392 aaPredicted RBP19.26■□□□□ 0.67
SUPT4H1-201ENST00000225504 NKX1-1Q15270 411 aaPredicted RBP19.26■□□□□ 0.67
SUPT4H1-201ENST00000225504 MTHFSDQ2M296 383 aaKnown RBP19.26■□□□□ 0.67
SUPT4H1-201ENST00000225504 AMOTQ4VCS5 1084 aa19.26■□□□□ 0.67
SUPT4H1-201ENST00000225504 IFNL2Q8IZJ0 200 aa19.26■□□□□ 0.67
SUPT4H1-201ENST00000225504 TNS1Q9HBL0 1735 aaKnown RBP19.26■□□□□ 0.67
SUPT4H1-201ENST00000225504 FCHSD2O94868 740 aa19.23■□□□□ 0.67
SUPT4H1-201ENST00000225504 SYTL4Q96C24 671 aaPredicted RBP19.23■□□□□ 0.67
SUPT4H1-201ENST00000225504 BAG6P46379 1132 aa19.22■□□□□ 0.67
SUPT4H1-201ENST00000225504 EZH2Q15910 746 aaKnown RBP19.22■□□□□ 0.67
SUPT4H1-201ENST00000225504 CAMKK2Q96RR4 588 aa19.22■□□□□ 0.67
SUPT4H1-201ENST00000225504 PLEKHG2Q9H7P9 1386 aa19.22■□□□□ 0.67
SUPT4H1-201ENST00000225504 MPRIPQ6WCQ1 1025 aa19.22■□□□□ 0.67
SUPT4H1-201ENST00000225504 DOT1LQ8TEK3 1739 aa19.21■□□□□ 0.67
SUPT4H1-201ENST00000225504 NHSQ6T4R5 1651 aa19.21■□□□□ 0.67
SUPT4H1-201ENST00000225504 C1orf141Q5JVX7 400 aa19.2■□□□□ 0.66
SUPT4H1-201ENST00000225504 PLEKHF1Q96S99 279 aa19.2■□□□□ 0.66
SUPT4H1-201ENST00000225504 TOGARAM1Q9Y4F4 1720 aa19.19■□□□□ 0.66
SUPT4H1-201ENST00000225504 AKAP4Q5JQC9 854 aa19.19■□□□□ 0.66
SUPT4H1-201ENST00000225504 PROM2Q8N271 834 aa19.19■□□□□ 0.66
SUPT4H1-201ENST00000225504 LGR6Q9HBX8 967 aa19.19■□□□□ 0.66
SUPT4H1-201ENST00000225504 PLSCR1O15162 318 aa19.18■□□□□ 0.66
SUPT4H1-201ENST00000225504 PIGBQ92521 554 aa19.18■□□□□ 0.66
SUPT4H1-201ENST00000225504 DCAF5Q96JK2 942 aa19.18■□□□□ 0.66
SUPT4H1-201ENST00000225504 ADAMTS8Q9UP79 889 aa19.18■□□□□ 0.66
SUPT4H1-201ENST00000225504 KDM6AO15550 1401 aaPredicted RBP19.18■□□□□ 0.66
SUPT4H1-201ENST00000225504 BTAF1O14981 1849 aa19.17■□□□□ 0.66
SUPT4H1-201ENST00000225504 ITGB4P16144 1822 aa19.16■□□□□ 0.66
SUPT4H1-201ENST00000225504 HSP90AB1P08238 724 aaKnown RBP19.16■□□□□ 0.66
SUPT4H1-201ENST00000225504 ERVV-2B6SEH9 535 aa19.15■□□□□ 0.66
SUPT4H1-201ENST00000225504 WDR43Q15061 677 aaKnown RBP eCLIP19.15■□□□□ 0.66
SUPT4H1-201ENST00000225504 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
SUPT4H1-201ENST00000225504 GAS2L2Q8NHY3 880 aa19.15■□□□□ 0.66
SUPT4H1-201ENST00000225504 RNMTO43148 476 aaKnown RBP19.14■□□□□ 0.65
SUPT4H1-201ENST00000225504 IL17REQ8NFR9 667 aa19.14■□□□□ 0.65
SUPT4H1-201ENST00000225504 TMOD3Q9NYL9 352 aa19.14■□□□□ 0.65
SUPT4H1-201ENST00000225504 GNAT3A8MTJ3 354 aa19.13■□□□□ 0.65
SUPT4H1-201ENST00000225504 KCNQ4P56696 695 aa19.13■□□□□ 0.65
SUPT4H1-201ENST00000225504 CABP4P57796 275 aa19.13■□□□□ 0.65
SUPT4H1-201ENST00000225504 TXNRD1Q16881 649 aa19.13■□□□□ 0.65
SUPT4H1-201ENST00000225504 NFATC2IPQ8NCF5 419 aa19.13■□□□□ 0.65
SUPT4H1-201ENST00000225504 MRS2Q9HD23 443 aa19.13■□□□□ 0.65
SUPT4H1-201ENST00000225504 ASAP1Q9ULH1 1129 aa19.12■□□□□ 0.65
SUPT4H1-201ENST00000225504 PNISRQ8TF01 805 aaKnown RBP19.11■□□□□ 0.65
SUPT4H1-201ENST00000225504 MAP3K5Q99683 1374 aa19.11■□□□□ 0.65
SUPT4H1-201ENST00000225504 SCN11AQ9UI33 1791 aa19.11■□□□□ 0.65
SUPT4H1-201ENST00000225504 DIEXFQ68CQ4 756 aaKnown RBP19.1■□□□□ 0.65
SUPT4H1-201ENST00000225504 PNNQ9H307 717 aaKnown RBP19.1■□□□□ 0.65
SUPT4H1-201ENST00000225504 ATG3Q9NT62 314 aa19.1■□□□□ 0.65
SUPT4H1-201ENST00000225504 LRRC4BQ9NT99 713 aa19.1■□□□□ 0.65
SUPT4H1-201ENST00000225504 DCTN1Q14203 1278 aa19.09■□□□□ 0.65
SUPT4H1-201ENST00000225504 NFE2L2Q16236 605 aa19.09■□□□□ 0.65
SUPT4H1-201ENST00000225504 MCM10Q7L590 875 aa19.09■□□□□ 0.65
SUPT4H1-201ENST00000225504 SLC52A2Q9HAB3 445 aa19.09■□□□□ 0.65
SUPT4H1-201ENST00000225504 VIRMAQ69YN4 1812 aaKnown RBP19.08■□□□□ 0.65
SUPT4H1-201ENST00000225504 MAPK8IP3Q9UPT6 1336 aa19.08■□□□□ 0.65
SUPT4H1-201ENST00000225504 NEFMP07197 916 aa19.08■□□□□ 0.64
SUPT4H1-201ENST00000225504 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
SUPT4H1-201ENST00000225504 RRP7AQ9Y3A4 280 aaKnown RBP19.07■□□□□ 0.64
SUPT4H1-201ENST00000225504 RREB1Q92766 1687 aa19.07■□□□□ 0.64
SUPT4H1-201ENST00000225504 ADAMTS7Q9UKP4 1686 aa19.07■□□□□ 0.64
SUPT4H1-201ENST00000225504 PALLDQ8WX93 1383 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms