RNA–Protein interactions for RNA: ENST00000223500.8

CHMP5-201, Transcript of charged multivesicular body protein 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP5, Length 1,477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-201ENST00000223500 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
CHMP5-201ENST00000223500 CCDC27Q2M243 656 aa21.76■■□□□ 1.07
CHMP5-201ENST00000223500 THRAP3Q9Y2W1 955 aaKnown RBP21.76■■□□□ 1.07
CHMP5-201ENST00000223500 DLG5Q8TDM6 1919 aa21.75■■□□□ 1.07
CHMP5-201ENST00000223500 VPS72Q15906 364 aa21.75■■□□□ 1.07
CHMP5-201ENST00000223500 MTHFSDQ2M296 383 aaKnown RBP21.75■■□□□ 1.07
CHMP5-201ENST00000223500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.75■■□□□ 1.073e-7■■□□□ 12.6
CHMP5-201ENST00000223500 PARP4Q9UKK3 1724 aaKnown RBP21.75■■□□□ 1.07
CHMP5-201ENST00000223500 SPATA31A1Q5TZJ5 1347 aa21.74■■□□□ 1.07
CHMP5-201ENST00000223500 SPATA31A5Q5VU36 1347 aa21.74■■□□□ 1.07
CHMP5-201ENST00000223500 SPATA31A7Q8IWB4 1347 aa21.74■■□□□ 1.07
CHMP5-201ENST00000223500 SPG7Q9UQ90 795 aa21.74■■□□□ 1.07
CHMP5-201ENST00000223500 MEGF6O75095 1541 aa21.73■■□□□ 1.07
CHMP5-201ENST00000223500 CDCA7Q9BWT1 371 aaPredicted RBP21.72■■□□□ 1.07
CHMP5-201ENST00000223500 ZNF530Q6P9A1 599 aaPredicted RBP21.71■■□□□ 1.07
CHMP5-201ENST00000223500 WWC1Q8IX03 1113 aa21.71■■□□□ 1.07
CHMP5-201ENST00000223500 OVOS2A0A0G2JMS6 1433 aa21.71■■□□□ 1.07
CHMP5-201ENST00000223500 RTF1Q92541 710 aaKnown RBP21.71■■□□□ 1.07
CHMP5-201ENST00000223500 HTATSF1O43719 755 aaKnown RBP21.7■■□□□ 1.06
CHMP5-201ENST00000223500 PDE3BQ13370 1112 aa21.7■■□□□ 1.06
CHMP5-201ENST00000223500 C1orf141Q5JVX7 400 aa21.7■■□□□ 1.06
CHMP5-201ENST00000223500 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
CHMP5-201ENST00000223500 TRPC5Q9UL62 973 aaPredicted RBP21.7■■□□□ 1.06
CHMP5-201ENST00000223500 TRIM35Q9UPQ4 493 aa21.7■■□□□ 1.06
CHMP5-201ENST00000223500 PKD1L3Q7Z443 1732 aa21.69■■□□□ 1.06
CHMP5-201ENST00000223500 GNAT3A8MTJ3 354 aa21.69■■□□□ 1.06
CHMP5-201ENST00000223500 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
CHMP5-201ENST00000223500 ZCRB1Q8TBF4 217 aaKnown RBP21.69■■□□□ 1.06
CHMP5-201ENST00000223500 WNK3Q9BYP7 1800 aa21.69■■□□□ 1.06
CHMP5-201ENST00000223500 ZNF521Q96K83 1311 aa21.68■■□□□ 1.06
CHMP5-201ENST00000223500 MAP3K5Q99683 1374 aa21.68■■□□□ 1.06
CHMP5-201ENST00000223500 CALD1Q05682 793 aaKnown RBP21.68■■□□□ 1.06
CHMP5-201ENST00000223500 BARGINQ6ZT62 677 aa21.68■■□□□ 1.06
CHMP5-201ENST00000223500 WDR63Q8IWG1 891 aa21.68■■□□□ 1.06
CHMP5-201ENST00000223500 DISP2A7MBM2 1401 aa21.67■■□□□ 1.06
CHMP5-201ENST00000223500 GOLGA2Q08379 1002 aa21.67■■□□□ 1.06
CHMP5-201ENST00000223500 CENPBP07199 599 aaPredicted RBP21.66■■□□□ 1.06
CHMP5-201ENST00000223500 ATRNO75882 1429 aa21.66■■□□□ 1.06
CHMP5-201ENST00000223500 ZNF772Q68DY9 489 aaPredicted RBP21.65■■□□□ 1.06
CHMP5-201ENST00000223500 IFNL2Q8IZJ0 200 aa21.65■■□□□ 1.06
CHMP5-201ENST00000223500 PCDH11XQ9BZA7 1347 aa21.65■■□□□ 1.06
CHMP5-201ENST00000223500 PCDH11YQ9BZA8 1340 aa21.65■■□□□ 1.06
CHMP5-201ENST00000223500 EXOC5O00471 708 aa21.64■■□□□ 1.06
CHMP5-201ENST00000223500 GJD4Q96KN9 370 aaPredicted RBP21.64■■□□□ 1.06
CHMP5-201ENST00000223500 QTRT2Q9H974 415 aaKnown RBP21.64■■□□□ 1.06
CHMP5-201ENST00000223500 HSP90AB1P08238 724 aaKnown RBP21.64■■□□□ 1.05
CHMP5-201ENST00000223500 PHKG2P15735 406 aa21.63■■□□□ 1.05
CHMP5-201ENST00000223500 IL16Q14005 1332 aa21.63■■□□□ 1.05
CHMP5-201ENST00000223500 E9PSI1 815 aa21.62■■□□□ 1.05
CHMP5-201ENST00000223500 FAM98CQ17RN3 349 aaKnown RBP21.62■■□□□ 1.05
CHMP5-201ENST00000223500 MCM10Q7L590 875 aa21.62■■□□□ 1.05
CHMP5-201ENST00000223500 DCTN1Q14203 1278 aa21.61■■□□□ 1.05
CHMP5-201ENST00000223500 CYP27B1O15528 508 aa21.6■■□□□ 1.05
CHMP5-201ENST00000223500 DDB1Q16531 1140 aa21.6■■□□□ 1.05
CHMP5-201ENST00000223500 DDX54Q8TDD1 881 aaKnown RBP21.6■■□□□ 1.05
CHMP5-201ENST00000223500 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
CHMP5-201ENST00000223500 TNS2Q63HR2 1409 aa21.59■■□□□ 1.05
CHMP5-201ENST00000223500 THUMPD2Q9BTF0 503 aaKnown RBP21.59■■□□□ 1.05
CHMP5-201ENST00000223500 SHANK3Q9BYB0 1731 aa21.59■■□□□ 1.05
CHMP5-201ENST00000223500 SLFN5Q08AF3 891 aa21.58■■□□□ 1.05
CHMP5-201ENST00000223500 MPRIPQ6WCQ1 1025 aa21.58■■□□□ 1.05
CHMP5-201ENST00000223500 IL17REQ8NFR9 667 aa21.58■■□□□ 1.05
CHMP5-201ENST00000223500 CDCA7LQ96GN5 454 aa21.58■■□□□ 1.05
CHMP5-201ENST00000223500 MYH16Q9H6N6 1097 aa21.58■■□□□ 1.05
CHMP5-201ENST00000223500 GLI3P10071 1580 aa21.58■■□□□ 1.05
CHMP5-201ENST00000223500 A0A0G2JS52 829 aa21.58■■□□□ 1.04
CHMP5-201ENST00000223500 RNMTO43148 476 aaKnown RBP21.58■■□□□ 1.04
CHMP5-201ENST00000223500 MYT1Q01538 1121 aa21.58■■□□□ 1.04
CHMP5-201ENST00000223500 DCAF5Q96JK2 942 aa21.58■■□□□ 1.04
CHMP5-201ENST00000223500 GNAI1P63096 354 aa21.57■■□□□ 1.04
CHMP5-201ENST00000223500 IFT57Q9NWB7 429 aa21.57■■□□□ 1.04
CHMP5-201ENST00000223500 SCN11AQ9UI33 1791 aa21.56■■□□□ 1.04
CHMP5-201ENST00000223500 TEFQ10587 303 aa21.56■■□□□ 1.04
CHMP5-201ENST00000223500 NKX1-1Q15270 411 aaPredicted RBP21.56■■□□□ 1.04
CHMP5-201ENST00000223500 ILDR1Q86SU0 546 aaPredicted RBP21.56■■□□□ 1.04
CHMP5-201ENST00000223500 LGR6Q9HBX8 967 aa21.56■■□□□ 1.04
CHMP5-201ENST00000223500 LAS1LQ9Y4W2 734 aaKnown RBP21.56■■□□□ 1.04
CHMP5-201ENST00000223500 LRRC37A3O60309 1634 aa21.55■■□□□ 1.04
CHMP5-201ENST00000223500 CEMIPQ8WUJ3 1361 aa21.55■■□□□ 1.04
CHMP5-201ENST00000223500 ADAMTS7Q9UKP4 1686 aa21.54■■□□□ 1.04
CHMP5-201ENST00000223500 ONECUT3O60422 494 aaPredicted RBP21.54■■□□□ 1.04
CHMP5-201ENST00000223500 RBM6P78332 1123 aaKnown RBP21.54■■□□□ 1.04
CHMP5-201ENST00000223500 CFAP44Q96MT7 982 aa21.54■■□□□ 1.04
CHMP5-201ENST00000223500 SPINK5Q9NQ38 1064 aaPredicted RBP21.54■■□□□ 1.04
CHMP5-201ENST00000223500 KAT6BQ8WYB5 2073 aa21.53■■□□□ 1.04
CHMP5-201ENST00000223500 TRMT2AQ8IZ69 625 aaKnown RBP21.53■■□□□ 1.04
CHMP5-201ENST00000223500 THSD7AQ9UPZ6 1657 aa21.53■■□□□ 1.04
CHMP5-201ENST00000223500 ZNF853P0CG23 659 aa21.52■■□□□ 1.04
CHMP5-201ENST00000223500 TAF7Q15545 349 aaPredicted RBP21.52■■□□□ 1.04
CHMP5-201ENST00000223500 BABAM1Q9NWV8 329 aa21.52■■□□□ 1.04
CHMP5-201ENST00000223500 KDM6AO15550 1401 aaPredicted RBP21.52■■□□□ 1.03
CHMP5-201ENST00000223500 DUSP27Q5VZP5 1158 aa21.52■■□□□ 1.03
CHMP5-201ENST00000223500 ERVV-2B6SEH9 535 aa21.51■■□□□ 1.03
CHMP5-201ENST00000223500 CHL1O00533 1208 aa21.5■■□□□ 1.03
CHMP5-201ENST00000223500 SEPT12Q8IYM1 358 aa21.5■■□□□ 1.03
CHMP5-201ENST00000223500 FANCIQ9NVI1 1328 aa21.49■■□□□ 1.03
CHMP5-201ENST00000223500 SLC52A2Q9HAB3 445 aa21.49■■□□□ 1.03
CHMP5-201ENST00000223500 TSPYL4Q9UJ04 414 aa21.49■■□□□ 1.03
CHMP5-201ENST00000223500 RXRBP28702 533 aa21.48■■□□□ 1.03
CHMP5-201ENST00000223500 CABP4P57796 275 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms