RNA–Protein interactions for RNA: ENST00000223073.6

RBM28-201, Transcript of RNA binding motif protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBM28, Length 15,507 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-201ENST00000223073 GTF2E1P29083 439 aaPredicted RBP8.02□□□□□ -1.13
RBM28-201ENST00000223073 GCOM1H8Y6P7 765 aaPredicted RBP8.02□□□□□ -1.13
RBM28-201ENST00000223073 MYZAPP0CAP1 466 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 KRT85P78386 507 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 INF2Q27J81 1249 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 GOLGA5Q8TBA6 731 aa8.02□□□□□ -1.13
RBM28-201ENST00000223073 ERC2O15083 957 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 KRBA2Q6ZNG9 492 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 STMN4Q9H169 189 aaPredicted RBP8.01□□□□□ -1.13
RBM28-201ENST00000223073 LRSAM1Q6UWE0 723 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 PCMTD1Q96MG8 357 aaPredicted RBP8.01□□□□□ -1.13
RBM28-201ENST00000223073 RAD21O60216 631 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 CCDC181Q5TID7 509 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 CCDC7Q96M83 1385 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 UIMC1Q96RL1 719 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 ANO10Q9NW15 660 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 CPLX1O14810 134 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 SYCP1Q15431 976 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 SEPT7Q16181 437 aaKnown RBP8.01□□□□□ -1.13
RBM28-201ENST00000223073 TNPO1Q92973 898 aaKnown RBP8.01□□□□□ -1.13
RBM28-201ENST00000223073 C6orf163Q5TEZ5 329 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 COG6Q9Y2V7 657 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 DHX29Q7Z478 1369 aaKnown RBP8.01□□□□□ -1.13
RBM28-201ENST00000223073 UPF3BQ9BZI7 483 aaKnown RBP8.01□□□□□ -1.13
RBM28-201ENST00000223073 ZSCAN23Q3MJ62 389 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 SNX21Q969T3 373 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 CLIP2Q9UDT6 1046 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 MPHOSPH9Q99550 1183 aa8.01□□□□□ -1.13
RBM28-201ENST00000223073 NAA15Q9BXJ9 866 aaKnown RBP8.01□□□□□ -1.13
RBM28-201ENST00000223073 WHAMMP3Q1A5X7 153 aa8□□□□□ -1.13
RBM28-201ENST00000223073 CEP63Q96MT8 703 aa8□□□□□ -1.13
RBM28-201ENST00000223073 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8□□□□□ -1.13
RBM28-201ENST00000223073 CCDC40Q4G0X9 1142 aa8□□□□□ -1.13
RBM28-201ENST00000223073 EPB41L2O43491 1005 aaKnown RBP8□□□□□ -1.13
RBM28-201ENST00000223073 SATB1Q01826 763 aa8□□□□□ -1.13
RBM28-201ENST00000223073 ERO1AQ96HE7 468 aa8□□□□□ -1.13
RBM28-201ENST00000223073 GCKP35557 465 aa8□□□□□ -1.13
RBM28-201ENST00000223073 MICALL1Q8N3F8 863 aa8□□□□□ -1.13
RBM28-201ENST00000223073 WWC2Q6AWC2 1192 aa8□□□□□ -1.13
RBM28-201ENST00000223073 DDX12PQ92771 950 aa8□□□□□ -1.13
RBM28-201ENST00000223073 IFT74Q96LB3 600 aa8□□□□□ -1.13
RBM28-201ENST00000223073 MYCNP04198 464 aaPredicted RBP8□□□□□ -1.13
RBM28-201ENST00000223073 MRFAP1L1Q96HT8 127 aa8□□□□□ -1.13
RBM28-201ENST00000223073 ANO2Q9NQ90 1003 aa8□□□□□ -1.13
RBM28-201ENST00000223073 TMX1Q9H3N1 280 aa8□□□□□ -1.13
RBM28-201ENST00000223073 MAGEC2Q9UBF1 373 aaPredicted RBP8□□□□□ -1.13
RBM28-201ENST00000223073 DCAF11Q8TEB1 546 aa8□□□□□ -1.13
RBM28-201ENST00000223073 SLU7O95391 586 aaKnown RBP8□□□□□ -1.13
RBM28-201ENST00000223073 NEK4P51957 841 aa8□□□□□ -1.13
RBM28-201ENST00000223073 NSRP1Q9H0G5 558 aaKnown RBP8□□□□□ -1.13
RBM28-201ENST00000223073 CEP104O60308 925 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 SLMAPQ14BN4 828 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 CNTLNQ9NXG0 1405 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 TBC1D2Q9BYX2 928 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 IRAK4Q9NWZ3 460 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 GEMIN8Q9NWZ8 242 aaKnown RBP7.99□□□□□ -1.13
RBM28-201ENST00000223073 ATP8B1O43520 1251 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 INPP5BP32019 993 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 PPP1R12BO60237 982 aaPredicted RBP7.99□□□□□ -1.13
RBM28-201ENST00000223073 C16orf45Q96MC5 204 aaPredicted RBP7.99□□□□□ -1.13
RBM28-201ENST00000223073 PUS7Q96PZ0 661 aaKnown RBP7.99□□□□□ -1.13
RBM28-201ENST00000223073 CKAP4Q07065 602 aaKnown RBP7.99□□□□□ -1.13
RBM28-201ENST00000223073 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 HSF2BPO75031 334 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 FRMD4BQ9Y2L6 1034 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 ZCCHC6Q5VYS8 1495 aaKnown RBP7.99□□□□□ -1.13
RBM28-201ENST00000223073 UBE2HP62256 183 aa7.99□□□□□ -1.13
RBM28-201ENST00000223073 VPS37CA5D8V6 355 aaPredicted RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 FAM76AQ8TAV0 307 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 SH2B1Q9NRF2 756 aaPredicted RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 BUB1BO60566 1050 aaPredicted RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 NLRP5P59047 1200 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 SNW1Q13573 536 aaKnown RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 GBP7Q8N8V2 638 aaPredicted RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 CCDC114Q96M63 670 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 VEZTQ9HBM0 779 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 RRAGDQ9NQL2 400 aaPredicted RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 MAP7Q14244 749 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 YY1AP1Q9H869 796 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 SRCIN1Q9C0H9 1055 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 SKILP12757 684 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 SENP3-EIF4A1A0A087X0R7 540 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 ATP11AP98196 1134 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 GOLGA1Q92805 767 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 URI1O94763 535 aaPredicted RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 FMN1Q68DA7 1419 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 RGL3Q3MIN7 710 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 PIBF1Q8WXW3 757 aa7.98□□□□□ -1.13
RBM28-201ENST00000223073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.98□□□□□ -1.134e-7■■■■■ 67.9
RBM28-201ENST00000223073 FOXD4L6Q3SYB3 417 aaPredicted RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 FOXD4L3Q6VB84 417 aaPredicted RBP7.98□□□□□ -1.13
RBM28-201ENST00000223073 FAM210AQ96ND0 272 aa7.97□□□□□ -1.13
RBM28-201ENST00000223073 DDX19AQ9NUU7 478 aaKnown RBP7.97□□□□□ -1.13
RBM28-201ENST00000223073 LUC7L2Q9Y383 392 aaKnown RBP7.97□□□□□ -1.13
RBM28-201ENST00000223073 STIM1Q13586 685 aa7.97□□□□□ -1.13
RBM28-201ENST00000223073 ZNF428Q96B54 188 aa7.97□□□□□ -1.13
RBM28-201ENST00000223073 WWC3Q9ULE0 1092 aa7.97□□□□□ -1.13
RBM28-201ENST00000223073 PPP6R1Q9UPN7 881 aa7.97□□□□□ -1.13
RBM28-201ENST00000223073 CALR3Q96L12 384 aaKnown RBP7.97□□□□□ -1.13
RBM28-201ENST00000223073 TTC14Q96N46 770 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms