RNA–Protein interactions for RNA: ENST00000222214.9

GCDH-201, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-201ENST00000222214 FAM161AQ3B820 660 aa22.41■■□□□ 1.18
GCDH-201ENST00000222214 API5Q9BZZ5 524 aaKnown RBP22.41■■□□□ 1.18
GCDH-201ENST00000222214 ATF3P18847 181 aa22.4■■□□□ 1.18
GCDH-201ENST00000222214 SKAP1Q86WV1 359 aa22.39■■□□□ 1.18
GCDH-201ENST00000222214 ZBTB40Q9NUA8 1239 aa22.39■■□□□ 1.18
GCDH-201ENST00000222214 USP19O94966 1318 aa22.39■■□□□ 1.18
GCDH-201ENST00000222214 ELL2O00472 640 aaPredicted RBP22.39■■□□□ 1.17
GCDH-201ENST00000222214 TMEM94Q12767 1356 aa22.39■■□□□ 1.17
GCDH-201ENST00000222214 ABCC4O15439 1325 aa22.38■■□□□ 1.17
GCDH-201ENST00000222214 GNAT3A8MTJ3 354 aa22.38■■□□□ 1.17
GCDH-201ENST00000222214 RGS3P49796 1198 aa22.38■■□□□ 1.17
GCDH-201ENST00000222214 KRT28Q7Z3Y7 464 aa22.38■■□□□ 1.17
GCDH-201ENST00000222214 GCP02774 474 aa22.38■■□□□ 1.17
GCDH-201ENST00000222214 BABAM1Q9NWV8 329 aa22.38■■□□□ 1.17
GCDH-201ENST00000222214 STRCP1A6NGW2 1772 aa22.37■■□□□ 1.17
GCDH-201ENST00000222214 MAP3K5Q99683 1374 aa22.37■■□□□ 1.17
GCDH-201ENST00000222214 CADPS2Q86UW7 1296 aa22.36■■□□□ 1.17
GCDH-201ENST00000222214 ARHGEF25Q86VW2 580 aa22.36■■□□□ 1.17
GCDH-201ENST00000222214 LTV1Q96GA3 475 aaPredicted RBP22.36■■□□□ 1.17
GCDH-201ENST00000222214 SOS1Q07889 1333 aaPredicted RBP22.35■■□□□ 1.17
GCDH-201ENST00000222214 ALS2Q96Q42 1657 aa22.35■■□□□ 1.17
GCDH-201ENST00000222214 MSH5O43196 834 aa22.34■■□□□ 1.17
GCDH-201ENST00000222214 TSPYL4Q9UJ04 414 aa22.34■■□□□ 1.17
GCDH-201ENST00000222214 IPO9Q96P70 1041 aaKnown RBP22.34■■□□□ 1.17
GCDH-201ENST00000222214 PTPRCP08575 1304 aa22.33■■□□□ 1.16
GCDH-201ENST00000222214 NCAPD2Q15021 1401 aa22.32■■□□□ 1.16
GCDH-201ENST00000222214 ZBTB7BO15156 539 aaPredicted RBP22.32■■□□□ 1.16
GCDH-201ENST00000222214 C8orf34Q49A92 452 aa22.32■■□□□ 1.16
GCDH-201ENST00000222214 MSH6P52701 1360 aa22.32■■□□□ 1.16
GCDH-201ENST00000222214 VIRMAQ69YN4 1812 aaKnown RBP22.32■■□□□ 1.16
GCDH-201ENST00000222214 XPCQ01831 940 aaPredicted RBP22.31■■□□□ 1.16
GCDH-201ENST00000222214 PDZRN3Q9UPQ7 1066 aa22.31■■□□□ 1.16
GCDH-201ENST00000222214 NBPF6Q5VWK0 638 aa22.3■■□□□ 1.16
GCDH-201ENST00000222214 LMOD2Q6P5Q4 547 aa22.3■■□□□ 1.16
GCDH-201ENST00000222214 NBPF4Q96M43 638 aa22.3■■□□□ 1.16
GCDH-201ENST00000222214 ERICH6Q7L0X2 663 aa22.29■■□□□ 1.16
GCDH-201ENST00000222214 SMC5Q8IY18 1101 aa22.29■■□□□ 1.16
GCDH-201ENST00000222214 CAMTA1Q9Y6Y1 1673 aa22.29■■□□□ 1.16
GCDH-201ENST00000222214 NPHP3Q7Z494 1330 aa22.29■■□□□ 1.16
GCDH-201ENST00000222214 TAF7Q15545 349 aaPredicted RBP22.27■■□□□ 1.16
GCDH-201ENST00000222214 AMOTQ4VCS5 1084 aa22.27■■□□□ 1.16
GCDH-201ENST00000222214 HSPA2P54652 639 aa22.27■■□□□ 1.15
GCDH-201ENST00000222214 INTS3Q68E01 1043 aaKnown RBP22.27■■□□□ 1.15
GCDH-201ENST00000222214 LMTK3Q96Q04 1460 aa22.27■■□□□ 1.15
GCDH-201ENST00000222214 CEMIPQ8WUJ3 1361 aa22.26■■□□□ 1.15
GCDH-201ENST00000222214 ZBTB7CA1YPR0 619 aa22.26■■□□□ 1.15
GCDH-201ENST00000222214 KRT24Q2M2I5 525 aa22.26■■□□□ 1.15
GCDH-201ENST00000222214 USHBP1Q8N6Y0 703 aa22.26■■□□□ 1.15
GCDH-201ENST00000222214 IL17REQ8NFR9 667 aa22.26■■□□□ 1.15
GCDH-201ENST00000222214 LMO7Q8WWI1 1683 aa22.26■■□□□ 1.15
GCDH-201ENST00000222214 RGPD2P0DJD1 1756 aa22.25■■□□□ 1.15
GCDH-201ENST00000222214 PLEKHO1Q53GL0 409 aaPredicted RBP22.25■■□□□ 1.15
GCDH-201ENST00000222214 ANP32EQ9BTT0 268 aa22.25■■□□□ 1.15
GCDH-201ENST00000222214 NOP58Q9Y2X3 529 aaKnown RBP22.25■■□□□ 1.15
GCDH-201ENST00000222214 ABCC6O95255 1503 aa22.24■■□□□ 1.15
GCDH-201ENST00000222214 CACNA1FO60840 1977 aa22.24■■□□□ 1.15
GCDH-201ENST00000222214 ANKRD24Q8TF21 1146 aa22.24■■□□□ 1.15
GCDH-201ENST00000222214 MED1Q15648 1581 aaPredicted RBP22.24■■□□□ 1.15
GCDH-201ENST00000222214 NPM2Q86SE8 214 aaKnown RBP22.23■■□□□ 1.15
GCDH-201ENST00000222214 GCC1Q96CN9 775 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 DDRGK1Q96HY6 314 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 CHMP4AQ9BY43 222 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 MIS18AQ9NYP9 233 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 RGS12O14924 1447 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 STRCQ7RTU9 1775 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 AKAP4Q5JQC9 854 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 OVOS2A0A0G2JMS6 1433 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 TNS3Q68CZ2 1445 aa22.23■■□□□ 1.15
GCDH-201ENST00000222214 SLC4A2P04920 1241 aa22.22■■□□□ 1.15
GCDH-201ENST00000222214 CCDC30Q5VVM6 783 aa22.22■■□□□ 1.15
GCDH-201ENST00000222214 STK31Q9BXU1 1019 aa22.22■■□□□ 1.15
GCDH-201ENST00000222214 ZBTB47Q9UFB7 747 aaPredicted RBP22.22■■□□□ 1.15
GCDH-201ENST00000222214 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
GCDH-201ENST00000222214 LRRC59Q96AG4 307 aaKnown RBP22.2■■□□□ 1.14
GCDH-201ENST00000222214 PXDNQ92626 1479 aa22.2■■□□□ 1.14
GCDH-201ENST00000222214 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
GCDH-201ENST00000222214 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.14
GCDH-201ENST00000222214 KDM4FA0A1W2PPD8 638 aa22.19■■□□□ 1.14
GCDH-201ENST00000222214 ERBB3P21860 1342 aa22.19■■□□□ 1.14
GCDH-201ENST00000222214 NUCB1Q02818 461 aa22.18■■□□□ 1.14
GCDH-201ENST00000222214 ZNF530Q6P9A1 599 aaPredicted RBP22.18■■□□□ 1.14
GCDH-201ENST00000222214 HOXB7P09629 217 aa22.17■■□□□ 1.14
GCDH-201ENST00000222214 C1orf141Q5JVX7 400 aa22.17■■□□□ 1.14
GCDH-201ENST00000222214 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
GCDH-201ENST00000222214 RGPD5Q99666 1765 aa22.17■■□□□ 1.14
GCDH-201ENST00000222214 CCT4P50991 539 aaKnown RBP22.16■■□□□ 1.14
GCDH-201ENST00000222214 AXIN2Q9Y2T1 843 aa22.16■■□□□ 1.14
GCDH-201ENST00000222214 SPATA31A3Q5VYP0 1347 aa22.16■■□□□ 1.14
GCDH-201ENST00000222214 CRYBG1Q9Y4K1 1723 aa22.15■■□□□ 1.14
GCDH-201ENST00000222214 ZC3H6P61129 1189 aaKnown RBP22.14■■□□□ 1.14
GCDH-201ENST00000222214 TEFQ10587 303 aa22.14■■□□□ 1.14
GCDH-201ENST00000222214 RPAP2Q8IXW5 612 aaPredicted RBP22.14■■□□□ 1.14
GCDH-201ENST00000222214 COL18A1P39060 1754 aa22.14■■□□□ 1.14
GCDH-201ENST00000222214 CHD1LQ86WJ1 897 aa22.14■■□□□ 1.13
GCDH-201ENST00000222214 CPDO75976 1380 aa22.13■■□□□ 1.13
GCDH-201ENST00000222214 C1orf115Q9H7X2 142 aa22.12■■□□□ 1.13
GCDH-201ENST00000222214 PLEKHG5O94827 1062 aa22.12■■□□□ 1.13
GCDH-201ENST00000222214 BRINP3Q76B58 766 aa22.11■■□□□ 1.13
GCDH-201ENST00000222214 SIRT2Q8IXJ6 389 aa22.11■■□□□ 1.13
GCDH-201ENST00000222214 PXDNLA1KZ92 1463 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms