RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 PHLPP1O60346 1717 aa19.57■□□□□ 0.72
PAF1-201ENST00000221265 FAM208AQ9UK61 1670 aaKnown RBP19.57■□□□□ 0.72
PAF1-201ENST00000221265 C20orf194Q5TEA3 1177 aa19.57■□□□□ 0.72
PAF1-201ENST00000221265 MBIPQ9NS73 344 aa19.57■□□□□ 0.72
PAF1-201ENST00000221265 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
PAF1-201ENST00000221265 NLRP2Q9NX02 1062 aa19.57■□□□□ 0.72
PAF1-201ENST00000221265 RARSP54136 660 aaKnown RBP19.56■□□□□ 0.72
PAF1-201ENST00000221265 CALD1Q05682 793 aaKnown RBP19.56■□□□□ 0.72
PAF1-201ENST00000221265 GNAI1P63096 354 aa19.56■□□□□ 0.72
PAF1-201ENST00000221265 CFAP44Q96MT7 982 aa19.56■□□□□ 0.72
PAF1-201ENST00000221265 BCL2L13Q9BXK5 485 aa19.56■□□□□ 0.72
PAF1-201ENST00000221265 CSB-PGBD3P0DP91 1061 aa19.55■□□□□ 0.72
PAF1-201ENST00000221265 CRB1P82279 1406 aa19.55■□□□□ 0.72
PAF1-201ENST00000221265 COL16A1Q07092 1604 aaPredicted RBP19.55■□□□□ 0.72
PAF1-201ENST00000221265 TOM1O60784 492 aa19.55■□□□□ 0.72
PAF1-201ENST00000221265 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
PAF1-201ENST00000221265 RTF1Q92541 710 aaKnown RBP19.54■□□□□ 0.72
PAF1-201ENST00000221265 MAP3K5Q99683 1374 aa19.54■□□□□ 0.72
PAF1-201ENST00000221265 VIRMAQ69YN4 1812 aaKnown RBP19.53■□□□□ 0.72
PAF1-201ENST00000221265 UBAP1LF5GYI3 381 aa19.53■□□□□ 0.72
PAF1-201ENST00000221265 LRRC37A3O60309 1634 aa19.53■□□□□ 0.72
PAF1-201ENST00000221265 COL22A1Q8NFW1 1626 aaPredicted RBP19.53■□□□□ 0.72
PAF1-201ENST00000221265 TSPYL6Q8N831 410 aa19.52■□□□□ 0.72
PAF1-201ENST00000221265 IL17REQ8NFR9 667 aa19.52■□□□□ 0.72
PAF1-201ENST00000221265 MIS18AQ9NYP9 233 aa19.52■□□□□ 0.72
PAF1-201ENST00000221265 COL5A2P05997 1499 aaPredicted RBP19.51■□□□□ 0.71
PAF1-201ENST00000221265 MEGF6O75095 1541 aa19.51■□□□□ 0.71
PAF1-201ENST00000221265 ELL2O00472 640 aaPredicted RBP19.5■□□□□ 0.71
PAF1-201ENST00000221265 CHL1O00533 1208 aa19.5■□□□□ 0.71
PAF1-201ENST00000221265 ZNF530Q6P9A1 599 aaPredicted RBP19.5■□□□□ 0.71
PAF1-201ENST00000221265 CRBNQ96SW2 442 aa19.5■□□□□ 0.71
PAF1-201ENST00000221265 HTATSF1O43719 755 aaKnown RBP19.5■□□□□ 0.71
PAF1-201ENST00000221265 PLEKHO1Q53GL0 409 aaPredicted RBP19.5■□□□□ 0.71
PAF1-201ENST00000221265 C8orf58Q8NAV2 365 aa19.5■□□□□ 0.71
PAF1-201ENST00000221265 CT47B1P0C2W7 299 aaPredicted RBP19.49■□□□□ 0.71
PAF1-201ENST00000221265 KRT24Q2M2I5 525 aa19.49■□□□□ 0.71
PAF1-201ENST00000221265 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
PAF1-201ENST00000221265 FRAT1Q92837 279 aaPredicted RBP19.48■□□□□ 0.71
PAF1-201ENST00000221265 WDR17Q8IZU2 1322 aa19.48■□□□□ 0.71
PAF1-201ENST00000221265 LGR6Q9HBX8 967 aa19.48■□□□□ 0.71
PAF1-201ENST00000221265 AMOTQ4VCS5 1084 aa19.47■□□□□ 0.71
PAF1-201ENST00000221265 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
PAF1-201ENST00000221265 RAPGEF4Q8WZA2 1011 aa19.47■□□□□ 0.71
PAF1-201ENST00000221265 STRN4Q9NRL3 753 aa19.47■□□□□ 0.71
PAF1-201ENST00000221265 TNNQ9UQP3 1299 aa19.47■□□□□ 0.71
PAF1-201ENST00000221265 VAMP4O75379 141 aa19.47■□□□□ 0.71
PAF1-201ENST00000221265 MPRIPQ6WCQ1 1025 aa19.46■□□□□ 0.71
PAF1-201ENST00000221265 TOM1L2Q6ZVM7 507 aa19.46■□□□□ 0.71
PAF1-201ENST00000221265 SMC4Q9NTJ3 1288 aa19.46■□□□□ 0.71
PAF1-201ENST00000221265 AKAP4Q5JQC9 854 aa19.45■□□□□ 0.7
PAF1-201ENST00000221265 LARP1Q6PKG0 1096 aaKnown RBP19.45■□□□□ 0.7
PAF1-201ENST00000221265 CEMIPQ8WUJ3 1361 aa19.45■□□□□ 0.7
PAF1-201ENST00000221265 BTG4Q9NY30 223 aa19.45■□□□□ 0.7
PAF1-201ENST00000221265 TATP17735 454 aaPredicted RBP19.44■□□□□ 0.7
PAF1-201ENST00000221265 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
PAF1-201ENST00000221265 TSPYL4Q9UJ04 414 aa19.44■□□□□ 0.7
PAF1-201ENST00000221265 COL14A1Q05707 1796 aaKnown RBP19.44■□□□□ 0.7
PAF1-201ENST00000221265 TCERG1O14776 1098 aaKnown RBP19.44■□□□□ 0.7
PAF1-201ENST00000221265 CANXP27824 592 aaKnown RBP19.44■□□□□ 0.7
PAF1-201ENST00000221265 C1orf141Q5JVX7 400 aa19.43■□□□□ 0.7
PAF1-201ENST00000221265 PKD1L3Q7Z443 1732 aa19.43■□□□□ 0.7
PAF1-201ENST00000221265 CERKQ8TCT0 537 aa19.43■□□□□ 0.7
PAF1-201ENST00000221265 PANK1Q8TE04 598 aa19.43■□□□□ 0.7
PAF1-201ENST00000221265 EVA1CP58658 441 aa19.42■□□□□ 0.7
PAF1-201ENST00000221265 ADAMTS2O95450 1211 aa19.42■□□□□ 0.7
PAF1-201ENST00000221265 RLBP1P12271 317 aa19.41■□□□□ 0.7
PAF1-201ENST00000221265 TAF7Q15545 349 aaPredicted RBP19.41■□□□□ 0.7
PAF1-201ENST00000221265 RNMTO43148 476 aaKnown RBP19.4■□□□□ 0.7
PAF1-201ENST00000221265 CARD10Q9BWT7 1032 aa19.4■□□□□ 0.7
PAF1-201ENST00000221265 NUTM2BA6NNL0 878 aaPredicted RBP19.4■□□□□ 0.7
PAF1-201ENST00000221265 NUTM2EB1AL46 878 aaPredicted RBP19.4■□□□□ 0.7
PAF1-201ENST00000221265 NUTM2AQ8IVF1 878 aaPredicted RBP19.4■□□□□ 0.7
PAF1-201ENST00000221265 CLUAP1Q96AJ1 413 aa19.4■□□□□ 0.7
PAF1-201ENST00000221265 PARP4Q9UKK3 1724 aaKnown RBP19.4■□□□□ 0.7
PAF1-201ENST00000221265 SCN11AQ9UI33 1791 aa19.39■□□□□ 0.7
PAF1-201ENST00000221265 ALDH1L2Q3SY69 923 aa19.39■□□□□ 0.69
PAF1-201ENST00000221265 USP35Q9P2H5 1018 aa19.39■□□□□ 0.69
PAF1-201ENST00000221265 NOB1Q9ULX3 412 aaKnown RBP19.39■□□□□ 0.69
PAF1-201ENST00000221265 PLCH1Q4KWH8 1693 aa19.39■□□□□ 0.69
PAF1-201ENST00000221265 ADAMTS7Q9UKP4 1686 aa19.39■□□□□ 0.69
PAF1-201ENST00000221265 OVOS2A0A0G2JMS6 1433 aa19.39■□□□□ 0.69
PAF1-201ENST00000221265 CYP27B1O15528 508 aa19.39■□□□□ 0.69
PAF1-201ENST00000221265 PDE3AQ14432 1141 aa19.39■□□□□ 0.69
PAF1-201ENST00000221265 SPG7Q9UQ90 795 aa19.39■□□□□ 0.69
PAF1-201ENST00000221265 SIPA1L3O60292 1781 aaPredicted RBP19.39■□□□□ 0.69
PAF1-201ENST00000221265 KDM3BQ7LBC6 1761 aa19.38■□□□□ 0.69
PAF1-201ENST00000221265 PHKG2P15735 406 aa19.38■□□□□ 0.69
PAF1-201ENST00000221265 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.38■□□□□ 0.69
PAF1-201ENST00000221265 KDM6AO15550 1401 aaPredicted RBP19.37■□□□□ 0.69
PAF1-201ENST00000221265 MRPL50Q8N5N7 158 aaKnown RBP19.37■□□□□ 0.69
PAF1-201ENST00000221265 ZNF428Q96B54 188 aa19.37■□□□□ 0.69
PAF1-201ENST00000221265 COG6Q9Y2V7 657 aa19.37■□□□□ 0.69
PAF1-201ENST00000221265 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
PAF1-201ENST00000221265 ERICH6Q7L0X2 663 aa19.37■□□□□ 0.69
PAF1-201ENST00000221265 TRIM27P14373 513 aa19.36■□□□□ 0.69
PAF1-201ENST00000221265 TEFQ10587 303 aa19.36■□□□□ 0.69
PAF1-201ENST00000221265 SHANK3Q9BYB0 1731 aa19.36■□□□□ 0.69
PAF1-201ENST00000221265 KCNQ3O43525 872 aa19.36■□□□□ 0.69
PAF1-201ENST00000221265 MS4A1P11836 297 aa19.34■□□□□ 0.69
PAF1-201ENST00000221265 IL2RBP14784 551 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms