RNA–Protein interactions for RNA: ENST00000217398.3

PXMP4-201, Transcript of peroxisomal membrane protein 4, humanhuman

TSL 2 BASIC

Gene PXMP4, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-201ENST00000217398 PPP1R1BQ9UD71 204 aaPredicted RBP25.49■■□□□ 1.67
PXMP4-201ENST00000217398 ANKRD26Q9UPS8 1709 aa25.48■■□□□ 1.67
PXMP4-201ENST00000217398 ZNF827Q17R98 1081 aa25.47■■□□□ 1.67
PXMP4-201ENST00000217398 TUBGCP6Q96RT7 1819 aa25.47■■□□□ 1.67
PXMP4-201ENST00000217398 INSRP06213 1382 aa25.46■■□□□ 1.67
PXMP4-201ENST00000217398 KIF24Q5T7B8 1368 aa25.46■■□□□ 1.67
PXMP4-201ENST00000217398 ZCRB1Q8TBF4 217 aaKnown RBP25.46■■□□□ 1.67
PXMP4-201ENST00000217398 COL24A1Q17RW2 1714 aa25.46■■□□□ 1.67
PXMP4-201ENST00000217398 ATF5Q9Y2D1 282 aaPredicted RBP25.45■■□□□ 1.66
PXMP4-201ENST00000217398 NSD3Q9BZ95 1437 aa25.45■■□□□ 1.66
PXMP4-201ENST00000217398 HSP90AB2PQ58FF8 381 aa25.44■■□□□ 1.66
PXMP4-201ENST00000217398 PRIM1P49642 420 aaKnown RBP25.43■■□□□ 1.66
PXMP4-201ENST00000217398 USHBP1Q8N6Y0 703 aa25.43■■□□□ 1.66
PXMP4-201ENST00000217398 AKT1S1Q96B36 256 aa25.43■■□□□ 1.66
PXMP4-201ENST00000217398 MTFR1LQ9H019 292 aa25.43■■□□□ 1.66
PXMP4-201ENST00000217398 FLT4P35916 1363 aa25.43■■□□□ 1.66
PXMP4-201ENST00000217398 NCAPD2Q15021 1401 aa25.41■■□□□ 1.66
PXMP4-201ENST00000217398 CGNL1Q0VF96 1302 aa25.4■■□□□ 1.66
PXMP4-201ENST00000217398 MAP2P11137 1827 aaKnown RBP25.4■■□□□ 1.66
PXMP4-201ENST00000217398 SMG6Q86US8 1419 aaKnown RBP25.4■■□□□ 1.66
PXMP4-201ENST00000217398 SLC27A3Q5K4L6 730 aa25.4■■□□□ 1.66
PXMP4-201ENST00000217398 PKD1L3Q7Z443 1732 aa25.39■■□□□ 1.65
PXMP4-201ENST00000217398 EMILIN1Q9Y6C2 1016 aa25.38■■□□□ 1.65
PXMP4-201ENST00000217398 TOGARAM1Q9Y4F4 1720 aa25.37■■□□□ 1.65
PXMP4-201ENST00000217398 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
PXMP4-201ENST00000217398 KCNQ4P56696 695 aa25.35■■□□□ 1.65
PXMP4-201ENST00000217398 SYTL4Q96C24 671 aaPredicted RBP25.35■■□□□ 1.65
PXMP4-201ENST00000217398 RAPGEF4Q8WZA2 1011 aa25.34■■□□□ 1.65
PXMP4-201ENST00000217398 SYT17Q9BSW7 474 aa25.34■■□□□ 1.65
PXMP4-201ENST00000217398 FHDC1Q9C0D6 1143 aaPredicted RBP25.34■■□□□ 1.65
PXMP4-201ENST00000217398 UTRNP46939 3433 aa25.34■■□□□ 1.65
PXMP4-201ENST00000217398 ITGB4P16144 1822 aa25.34■■□□□ 1.65
PXMP4-201ENST00000217398 PNPLA7Q6ZV29 1317 aa25.34■■□□□ 1.65
PXMP4-201ENST00000217398 TATP17735 454 aaPredicted RBP25.33■■□□□ 1.65
PXMP4-201ENST00000217398 MAP3K5Q99683 1374 aa25.32■■□□□ 1.64
PXMP4-201ENST00000217398 TAF1LQ8IZX4 1826 aa25.32■■□□□ 1.64
PXMP4-201ENST00000217398 CYP27B1O15528 508 aa25.31■■□□□ 1.64
PXMP4-201ENST00000217398 WASHC2AQ641Q2 1341 aa25.31■■□□□ 1.64
PXMP4-201ENST00000217398 YY1P25490 414 aa25.3■■□□□ 1.64
PXMP4-201ENST00000217398 SLC16A10Q8TF71 515 aa25.3■■□□□ 1.64
PXMP4-201ENST00000217398 PCDH11XQ9BZA7 1347 aa25.3■■□□□ 1.64
PXMP4-201ENST00000217398 PCDH11YQ9BZA8 1340 aa25.3■■□□□ 1.64
PXMP4-201ENST00000217398 C5P01031 1676 aa25.29■■□□□ 1.64
PXMP4-201ENST00000217398 ARXQ96QS3 562 aa25.29■■□□□ 1.64
PXMP4-201ENST00000217398 POLKQ9UBT6 870 aa25.28■■□□□ 1.64
PXMP4-201ENST00000217398 CCNL1Q9UK58 526 aaPredicted RBP25.26■■□□□ 1.63
PXMP4-201ENST00000217398 HSPA5P11021 654 aaKnown RBP25.25■■□□□ 1.63
PXMP4-201ENST00000217398 EYA1Q99502 592 aa25.25■■□□□ 1.63
PXMP4-201ENST00000217398 DCAF8L1A6NGE4 600 aa25.24■■□□□ 1.63
PXMP4-201ENST00000217398 NKX1-1Q15270 411 aaPredicted RBP25.24■■□□□ 1.63
PXMP4-201ENST00000217398 TFCP2L1Q9NZI6 479 aa25.23■■□□□ 1.63
PXMP4-201ENST00000217398 CHD4Q14839 1912 aa25.23■■□□□ 1.63
PXMP4-201ENST00000217398 PPM1GO15355 546 aaPredicted RBP25.22■■□□□ 1.63
PXMP4-201ENST00000217398 EIF4G2P78344 907 aaKnown RBP eCLIP25.22■■□□□ 1.63
PXMP4-201ENST00000217398 PALLDQ8WX93 1383 aa25.2■■□□□ 1.63
PXMP4-201ENST00000217398 COL23A1Q86Y22 540 aaPredicted RBP25.19■■□□□ 1.62
PXMP4-201ENST00000217398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.19■■□□□ 1.62
PXMP4-201ENST00000217398 C4BP0C0L5 1744 aa25.18■■□□□ 1.62
PXMP4-201ENST00000217398 EIF4A2Q14240 407 aaKnown RBP25.18■■□□□ 1.62
PXMP4-201ENST00000217398 MPRIPQ6WCQ1 1025 aa25.18■■□□□ 1.62
PXMP4-201ENST00000217398 POLR3GLQ9BT43 218 aa25.18■■□□□ 1.62
PXMP4-201ENST00000217398 UBR3Q6ZT12 1888 aa25.17■■□□□ 1.62
PXMP4-201ENST00000217398 PIGBQ92521 554 aa25.17■■□□□ 1.62
PXMP4-201ENST00000217398 PANK3Q9H999 370 aa25.17■■□□□ 1.62
PXMP4-201ENST00000217398 PLEKHG2Q9H7P9 1386 aa25.16■■□□□ 1.62
PXMP4-201ENST00000217398 SPG7Q9UQ90 795 aa25.15■■□□□ 1.62
PXMP4-201ENST00000217398 GOLGB1Q14789 3259 aaKnown RBP25.15■■□□□ 1.62
PXMP4-201ENST00000217398 POLD1P28340 1107 aa25.14■■□□□ 1.62
PXMP4-201ENST00000217398 IGSF1Q8N6C5 1336 aa25.13■■□□□ 1.61
PXMP4-201ENST00000217398 PHKG2P15735 406 aa25.13■■□□□ 1.61
PXMP4-201ENST00000217398 TNNT2P45379 298 aaPredicted RBP25.13■■□□□ 1.61
PXMP4-201ENST00000217398 AMIGO3Q86WK7 504 aa25.13■■□□□ 1.61
PXMP4-201ENST00000217398 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
PXMP4-201ENST00000217398 SMARCC1Q92922 1105 aaPredicted RBP25.12■■□□□ 1.61
PXMP4-201ENST00000217398 NLGN2Q8NFZ4 835 aa25.1■■□□□ 1.61
PXMP4-201ENST00000217398 IFNL2Q8IZJ0 200 aa25.09■■□□□ 1.61
PXMP4-201ENST00000217398 HMGB2P26583 209 aaKnown RBP25.06■■□□□ 1.6
PXMP4-201ENST00000217398 ZNF784Q8NCA9 323 aaPredicted RBP25.06■■□□□ 1.6
PXMP4-201ENST00000217398 FLAD1Q8NFF5 587 aa25.06■■□□□ 1.6
PXMP4-201ENST00000217398 ASAP1Q9ULH1 1129 aa25.06■■□□□ 1.6
PXMP4-201ENST00000217398 ZNF831Q5JPB2 1677 aa25.06■■□□□ 1.6
PXMP4-201ENST00000217398 LOC102724428A0A0B4J2F2 783 aa25.05■■□□□ 1.6
PXMP4-201ENST00000217398 SIK1P57059 783 aa25.05■■□□□ 1.6
PXMP4-201ENST00000217398 MSL1Q68DK7 614 aa25.05■■□□□ 1.6
PXMP4-201ENST00000217398 LINC00116Q8NCU8 138 aa25.05■■□□□ 1.6
PXMP4-201ENST00000217398 MSH5O43196 834 aa25.04■■□□□ 1.6
PXMP4-201ENST00000217398 ITPK1Q13572 414 aa25.04■■□□□ 1.6
PXMP4-201ENST00000217398 KLHL34Q8N239 644 aa25.04■■□□□ 1.6
PXMP4-201ENST00000217398 TMOD3Q9NYL9 352 aa25.04■■□□□ 1.6
PXMP4-201ENST00000217398 SMIM5Q71RC9 77 aa25.03■■□□□ 1.6
PXMP4-201ENST00000217398 ATG3Q9NT62 314 aa25.03■■□□□ 1.6
PXMP4-201ENST00000217398 KDRP35968 1356 aa25.03■■□□□ 1.6
PXMP4-201ENST00000217398 GPR162Q16538 588 aa25.02■■□□□ 1.6
PXMP4-201ENST00000217398 KDM6AO15550 1401 aaPredicted RBP25.02■■□□□ 1.6
PXMP4-201ENST00000217398 COL5A3P25940 1745 aaPredicted RBP25.01■■□□□ 1.59
PXMP4-201ENST00000217398 AMER1Q5JTC6 1135 aaPredicted RBP25.01■■□□□ 1.59
PXMP4-201ENST00000217398 AK7Q96M32 723 aa25.01■■□□□ 1.59
PXMP4-201ENST00000217398 MORC1Q86VD1 984 aa25■■□□□ 1.59
PXMP4-201ENST00000217398 AEBP1Q8IUX7 1158 aa25■■□□□ 1.59
PXMP4-201ENST00000217398 SLC4A9Q96Q91 983 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms