RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 RIPK4P57078 832 aa13.08□□□□□ -0.31
RTCB-201ENST00000216038 FNBP4Q8N3X1 1017 aaPredicted RBP13.08□□□□□ -0.31
RTCB-201ENST00000216038 NFE2L2Q16236 605 aa13.07□□□□□ -0.32
RTCB-201ENST00000216038 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
RTCB-201ENST00000216038 ZBED9Q6R2W3 1325 aa13.06□□□□□ -0.32
RTCB-201ENST00000216038 EP400Q96L91 3159 aa13.06□□□□□ -0.32
RTCB-201ENST00000216038 SPATA31A1Q5TZJ5 1347 aa13.06□□□□□ -0.32
RTCB-201ENST00000216038 IL2RBP14784 551 aa13.05□□□□□ -0.32
RTCB-201ENST00000216038 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
RTCB-201ENST00000216038 THUMPD2Q9BTF0 503 aaKnown RBP13.05□□□□□ -0.32
RTCB-201ENST00000216038 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
RTCB-201ENST00000216038 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
RTCB-201ENST00000216038 SPATA31A5Q5VU36 1347 aa13.05□□□□□ -0.32
RTCB-201ENST00000216038 SPATA31A7Q8IWB4 1347 aa13.05□□□□□ -0.32
RTCB-201ENST00000216038 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
RTCB-201ENST00000216038 WWC1Q8IX03 1113 aa13.05□□□□□ -0.32
RTCB-201ENST00000216038 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
RTCB-201ENST00000216038 MCM10Q7L590 875 aa13.04□□□□□ -0.32
RTCB-201ENST00000216038 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
RTCB-201ENST00000216038 VPS72Q15906 364 aa13.03□□□□□ -0.32
RTCB-201ENST00000216038 FAM98CQ17RN3 349 aaKnown RBP13.03□□□□□ -0.32
RTCB-201ENST00000216038 GAS2L2Q8NHY3 880 aa13.03□□□□□ -0.32
RTCB-201ENST00000216038 PARP4Q9UKK3 1724 aaKnown RBP13.03□□□□□ -0.32
RTCB-201ENST00000216038 ILDR1Q86SU0 546 aaPredicted RBP13.03□□□□□ -0.32
RTCB-201ENST00000216038 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
RTCB-201ENST00000216038 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.03□□□□□ -0.32
RTCB-201ENST00000216038 OVOS2A0A0G2JMS6 1433 aa13.02□□□□□ -0.32
RTCB-201ENST00000216038 AMOTQ4VCS5 1084 aa13.02□□□□□ -0.33
RTCB-201ENST00000216038 DDX54Q8TDD1 881 aaKnown RBP13.02□□□□□ -0.33
RTCB-201ENST00000216038 A0A0G2JS52 829 aa13.01□□□□□ -0.33
RTCB-201ENST00000216038 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
RTCB-201ENST00000216038 QTRT2Q9H974 415 aaKnown RBP13.01□□□□□ -0.33
RTCB-201ENST00000216038 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
RTCB-201ENST00000216038 SPG7Q9UQ90 795 aa13.01□□□□□ -0.33
RTCB-201ENST00000216038 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
RTCB-201ENST00000216038 WNK3Q9BYP7 1800 aa13.01□□□□□ -0.33
RTCB-201ENST00000216038 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
RTCB-201ENST00000216038 CYP27B1O15528 508 aa13.01□□□□□ -0.33
RTCB-201ENST00000216038 C1orf141Q5JVX7 400 aa13.01□□□□□ -0.33
RTCB-201ENST00000216038 MPRIPQ6WCQ1 1025 aa13.01□□□□□ -0.33
RTCB-201ENST00000216038 PHF23Q9BUL5 403 aaPredicted RBP13.01□□□□□ -0.33
RTCB-201ENST00000216038 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
RTCB-201ENST00000216038 PKD1L3Q7Z443 1732 aa13□□□□□ -0.33
RTCB-201ENST00000216038 MAP3K5Q99683 1374 aa13□□□□□ -0.33
RTCB-201ENST00000216038 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
RTCB-201ENST00000216038 GJD4Q96KN9 370 aaPredicted RBP13□□□□□ -0.33
RTCB-201ENST00000216038 LGR6Q9HBX8 967 aa13□□□□□ -0.33
RTCB-201ENST00000216038 TRPC5Q9UL62 973 aaPredicted RBP13□□□□□ -0.33
RTCB-201ENST00000216038 LAS1LQ9Y4W2 734 aaKnown RBP13□□□□□ -0.33
RTCB-201ENST00000216038 DISP2A7MBM2 1401 aa13□□□□□ -0.33
RTCB-201ENST00000216038 FANCIQ9NVI1 1328 aa13□□□□□ -0.33
RTCB-201ENST00000216038 CCDC27Q2M243 656 aa13□□□□□ -0.33
RTCB-201ENST00000216038 THRAP3Q9Y2W1 955 aaKnown RBP13□□□□□ -0.33
RTCB-201ENST00000216038 SHANK3Q9BYB0 1731 aa12.99□□□□□ -0.33
RTCB-201ENST00000216038 PHKG2P15735 406 aa12.99□□□□□ -0.33
RTCB-201ENST00000216038 GOLGA2Q08379 1002 aa12.99□□□□□ -0.33
RTCB-201ENST00000216038 AKAP4Q5JQC9 854 aa12.99□□□□□ -0.33
RTCB-201ENST00000216038 IL17REQ8NFR9 667 aa12.99□□□□□ -0.33
RTCB-201ENST00000216038 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.99□□□□□ -0.332e-6■□□□□ 10.3
RTCB-201ENST00000216038 GLI3P10071 1580 aa12.99□□□□□ -0.33
RTCB-201ENST00000216038 ATRNO75882 1429 aa12.99□□□□□ -0.33
RTCB-201ENST00000216038 EXOC5O00471 708 aa12.98□□□□□ -0.33
RTCB-201ENST00000216038 LMOD3Q0VAK6 560 aa12.98□□□□□ -0.33
RTCB-201ENST00000216038 NGEFQ8N5V2 710 aa12.98□□□□□ -0.33
RTCB-201ENST00000216038 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
RTCB-201ENST00000216038 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
RTCB-201ENST00000216038 DDB1Q16531 1140 aa12.98□□□□□ -0.33
RTCB-201ENST00000216038 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
RTCB-201ENST00000216038 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
RTCB-201ENST00000216038 WDR63Q8IWG1 891 aa12.96□□□□□ -0.33
RTCB-201ENST00000216038 TSR2Q969E8 191 aaKnown RBP12.96□□□□□ -0.33
RTCB-201ENST00000216038 MIS18AQ9NYP9 233 aa12.96□□□□□ -0.33
RTCB-201ENST00000216038 LRRC37A3O60309 1634 aa12.96□□□□□ -0.34
RTCB-201ENST00000216038 ZNF772Q68DY9 489 aaPredicted RBP12.96□□□□□ -0.34
RTCB-201ENST00000216038 RGS17Q9UGC6 210 aaPredicted RBP12.96□□□□□ -0.34
RTCB-201ENST00000216038 RNMTO43148 476 aaKnown RBP12.95□□□□□ -0.34
RTCB-201ENST00000216038 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
RTCB-201ENST00000216038 NCBP3Q53F19 620 aaKnown RBP12.95□□□□□ -0.34
RTCB-201ENST00000216038 CDCA7Q9BWT1 371 aaPredicted RBP12.95□□□□□ -0.34
RTCB-201ENST00000216038 KDM6AO15550 1401 aaPredicted RBP12.95□□□□□ -0.34
RTCB-201ENST00000216038 TNS2Q63HR2 1409 aa12.95□□□□□ -0.34
RTCB-201ENST00000216038 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
RTCB-201ENST00000216038 FAM182BQ5T319 152 aa12.95□□□□□ -0.34
RTCB-201ENST00000216038 SCN11AQ9UI33 1791 aa12.94□□□□□ -0.34
RTCB-201ENST00000216038 PDE3BQ13370 1112 aa12.94□□□□□ -0.34
RTCB-201ENST00000216038 E9PSI1 815 aa12.93□□□□□ -0.34
RTCB-201ENST00000216038 TEFQ10587 303 aa12.93□□□□□ -0.34
RTCB-201ENST00000216038 DUSP27Q5VZP5 1158 aa12.93□□□□□ -0.34
RTCB-201ENST00000216038 SEPT12Q8IYM1 358 aa12.93□□□□□ -0.34
RTCB-201ENST00000216038 MARCH10Q8NA82 808 aaPredicted RBP12.93□□□□□ -0.34
RTCB-201ENST00000216038 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
RTCB-201ENST00000216038 DCAF5Q96JK2 942 aa12.93□□□□□ -0.34
RTCB-201ENST00000216038 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
RTCB-201ENST00000216038 THSD7AQ9UPZ6 1657 aa12.92□□□□□ -0.34
RTCB-201ENST00000216038 CALD1Q05682 793 aaKnown RBP12.92□□□□□ -0.34
RTCB-201ENST00000216038 ERICH6BQ5W0A0 696 aa12.92□□□□□ -0.34
RTCB-201ENST00000216038 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
RTCB-201ENST00000216038 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
RTCB-201ENST00000216038 CFAP44Q96MT7 982 aa12.92□□□□□ -0.34
RTCB-201ENST00000216038 MBIPQ9NS73 344 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms