RNA–Protein interactions for RNA: ENST00000167218.9

PDCD2-201, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 1,118 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-201ENST00000167218 PPM1GO15355 546 aaPredicted RBP38.59■■■■□ 3.77
PDCD2-201ENST00000167218 DDX54Q8TDD1 881 aaKnown RBP38.59■■■■□ 3.77
PDCD2-201ENST00000167218 NSD2O96028 1365 aa38.58■■■■□ 3.77
PDCD2-201ENST00000167218 ZCRB1Q8TBF4 217 aaKnown RBP38.57■■■■□ 3.76
PDCD2-201ENST00000167218 TNNT2P45379 298 aaPredicted RBP38.56■■■■□ 3.76
PDCD2-201ENST00000167218 NCAPD2Q15021 1401 aa38.54■■■■□ 3.76
PDCD2-201ENST00000167218 BTAF1O14981 1849 aa38.52■■■■□ 3.76
PDCD2-201ENST00000167218 NBPF14Q5TI25 921 aa38.52■■■■□ 3.76
PDCD2-201ENST00000167218 RAPGEF4Q8WZA2 1011 aa38.52■■■■□ 3.76
PDCD2-201ENST00000167218 KNSTRNQ9Y448 316 aa38.51■■■■□ 3.76
PDCD2-201ENST00000167218 LRP5O75197 1615 aa38.51■■■■□ 3.76
PDCD2-201ENST00000167218 TATP17735 454 aaPredicted RBP38.49■■■■□ 3.75
PDCD2-201ENST00000167218 TXNRD1Q16881 649 aa38.48■■■■□ 3.75
PDCD2-201ENST00000167218 AMER1Q5JTC6 1135 aaPredicted RBP38.48■■■■□ 3.75
PDCD2-201ENST00000167218 EYA1Q99502 592 aa38.47■■■■□ 3.75
PDCD2-201ENST00000167218 PER1O15534 1290 aaPredicted RBP38.45■■■■□ 3.75
PDCD2-201ENST00000167218 MORC1Q86VD1 984 aa38.45■■■■□ 3.75
PDCD2-201ENST00000167218 ANO8Q9HCE9 1232 aaPredicted RBP38.45■■■■□ 3.75
PDCD2-201ENST00000167218 DOT1LQ8TEK3 1739 aa38.43■■■■□ 3.74
PDCD2-201ENST00000167218 EIF4A2Q14240 407 aaKnown RBP38.43■■■■□ 3.74
PDCD2-201ENST00000167218 PRIM1P49642 420 aaKnown RBP38.4■■■■□ 3.74
PDCD2-201ENST00000167218 PKD1L3Q7Z443 1732 aa38.4■■■■□ 3.74
PDCD2-201ENST00000167218 PCDH11XQ9BZA7 1347 aa38.38■■■■□ 3.73
PDCD2-201ENST00000167218 PCDH11YQ9BZA8 1340 aa38.38■■■■□ 3.73
PDCD2-201ENST00000167218 CYP27B1O15528 508 aa38.36■■■■□ 3.73
PDCD2-201ENST00000167218 SYTL4Q96C24 671 aaPredicted RBP38.34■■■■□ 3.73
PDCD2-201ENST00000167218 IGSF1Q8N6C5 1336 aa38.32■■■■□ 3.72
PDCD2-201ENST00000167218 PAPPAQ13219 1627 aa38.31■■■■□ 3.72
PDCD2-201ENST00000167218 LRRC4BQ9NT99 713 aa38.31■■■■□ 3.72
PDCD2-201ENST00000167218 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP38.29■■■■□ 3.72
PDCD2-201ENST00000167218 CASZ1Q86V15 1759 aa38.29■■■■□ 3.72
PDCD2-201ENST00000167218 SLC15A2Q16348 729 aa38.28■■■■□ 3.72
PDCD2-201ENST00000167218 STK32BQ9NY57 414 aa38.27■■■■□ 3.72
PDCD2-201ENST00000167218 SPG7Q9UQ90 795 aa38.27■■■■□ 3.72
PDCD2-201ENST00000167218 PDGFDQ9GZP0 370 aaPredicted RBP38.26■■■■□ 3.72
PDCD2-201ENST00000167218 LY75O60449 1722 aa38.26■■■■□ 3.71
PDCD2-201ENST00000167218 TOGARAM1Q9Y4F4 1720 aa38.26■■■■□ 3.71
PDCD2-201ENST00000167218 NKX1-1Q15270 411 aaPredicted RBP38.25■■■■□ 3.71
PDCD2-201ENST00000167218 NPC1L1Q9UHC9 1359 aa38.23■■■■□ 3.71
PDCD2-201ENST00000167218 SLC27A3Q5K4L6 730 aa38.23■■■■□ 3.71
PDCD2-201ENST00000167218 CC2D1BQ5T0F9 858 aaKnown RBP38.23■■■■□ 3.71
PDCD2-201ENST00000167218 PLEKHG2Q9H7P9 1386 aa38.22■■■■□ 3.71
PDCD2-201ENST00000167218 ITGB4P16144 1822 aa38.22■■■■□ 3.71
PDCD2-201ENST00000167218 IL13P35225 146 aa38.2■■■■□ 3.71
PDCD2-201ENST00000167218 MTHFSP49914 203 aa38.18■■■■□ 3.7
PDCD2-201ENST00000167218 ZNF827Q17R98 1081 aa38.17■■■■□ 3.7
PDCD2-201ENST00000167218 SPON1Q9HCB6 807 aa38.17■■■■□ 3.7
PDCD2-201ENST00000167218 PHKG2P15735 406 aa38.16■■■■□ 3.7
PDCD2-201ENST00000167218 KCNQ4P56696 695 aa38.16■■■■□ 3.7
PDCD2-201ENST00000167218 MPRIPQ6WCQ1 1025 aa38.15■■■■□ 3.7
PDCD2-201ENST00000167218 AEBP1Q8IUX7 1158 aa38.15■■■■□ 3.7
PDCD2-201ENST00000167218 IFNL2Q8IZJ0 200 aa38.15■■■■□ 3.7
PDCD2-201ENST00000167218 AKT1S1Q96B36 256 aa38.15■■■■□ 3.7
PDCD2-201ENST00000167218 KDRP35968 1356 aa38.11■■■■□ 3.69
PDCD2-201ENST00000167218 PIGBQ92521 554 aa38.1■■■■□ 3.69
PDCD2-201ENST00000167218 CCNL1Q9UK58 526 aaPredicted RBP38.1■■■■□ 3.69
PDCD2-201ENST00000167218 SULT6B1Q6IMI4 303 aa38.09■■■■□ 3.69
PDCD2-201ENST00000167218 ZBTB7AO95365 584 aa38.08■■■■□ 3.69
PDCD2-201ENST00000167218 PLEKHO1Q53GL0 409 aaPredicted RBP38.07■■■■□ 3.68
PDCD2-201ENST00000167218 QSER1Q2KHR3 1735 aa38.07■■■■□ 3.68
PDCD2-201ENST00000167218 PALLDQ8WX93 1383 aa38.06■■■■□ 3.68
PDCD2-201ENST00000167218 CNGB1Q14028 1251 aaPredicted RBP38.06■■■■□ 3.68
PDCD2-201ENST00000167218 AMOTQ4VCS5 1084 aa38.05■■■■□ 3.68
PDCD2-201ENST00000167218 TUBGCP6Q96RT7 1819 aa38.05■■■■□ 3.68
PDCD2-201ENST00000167218 PTGER2P43116 358 aa38.03■■■■□ 3.68
PDCD2-201ENST00000167218 ATF5Q9Y2D1 282 aaPredicted RBP38.02■■■■□ 3.68
PDCD2-201ENST00000167218 SMARCC1Q92922 1105 aaPredicted RBP38.01■■■■□ 3.68
PDCD2-201ENST00000167218 TAF1LQ8IZX4 1826 aa38.01■■■■□ 3.67
PDCD2-201ENST00000167218 ZNF530Q6P9A1 599 aaPredicted RBP38■■■■□ 3.67
PDCD2-201ENST00000167218 MTFR1LQ9H019 292 aa38■■■■□ 3.67
PDCD2-201ENST00000167218 TMOD3Q9NYL9 352 aa38■■■■□ 3.67
PDCD2-201ENST00000167218 PNPLA7Q6ZV29 1317 aa38■■■■□ 3.67
PDCD2-201ENST00000167218 COL3A1P02461 1466 aaPredicted RBP38■■■■□ 3.67
PDCD2-201ENST00000167218 DIAPH1O60610 1272 aaKnown RBP37.99■■■■□ 3.67
PDCD2-201ENST00000167218 C5P01031 1676 aa37.98■■■■□ 3.67
PDCD2-201ENST00000167218 HSP90AB1P08238 724 aaKnown RBP37.97■■■■□ 3.67
PDCD2-201ENST00000167218 DCAF5Q96JK2 942 aa37.97■■■■□ 3.67
PDCD2-201ENST00000167218 SGIP1Q9BQI5 828 aa37.97■■■■□ 3.67
PDCD2-201ENST00000167218 KDM6AO15550 1401 aaPredicted RBP37.96■■■■□ 3.67
PDCD2-201ENST00000167218 TFCP2L1Q9NZI6 479 aa37.96■■■■□ 3.67
PDCD2-201ENST00000167218 PPP1R1BQ9UD71 204 aaPredicted RBP37.96■■■■□ 3.67
PDCD2-201ENST00000167218 ERVV-2B6SEH9 535 aa37.95■■■■□ 3.67
PDCD2-201ENST00000167218 ASAP1Q9ULH1 1129 aa37.95■■■■□ 3.67
PDCD2-201ENST00000167218 HMOX1P09601 288 aa37.93■■■■□ 3.66
PDCD2-201ENST00000167218 ATG3Q9NT62 314 aa37.92■■■■□ 3.66
PDCD2-201ENST00000167218 SLC16A10Q8TF71 515 aa37.9■■■■□ 3.66
PDCD2-201ENST00000167218 LOC102724428A0A0B4J2F2 783 aa37.89■■■■□ 3.66
PDCD2-201ENST00000167218 SIK1P57059 783 aa37.89■■■■□ 3.66
PDCD2-201ENST00000167218 C1orf141Q5JVX7 400 aa37.89■■■■□ 3.66
PDCD2-201ENST00000167218 COL24A1Q17RW2 1714 aa37.88■■■■□ 3.65
PDCD2-201ENST00000167218 HMGB2P26583 209 aaKnown RBP37.87■■■■□ 3.65
PDCD2-201ENST00000167218 C4BP0C0L5 1744 aa37.87■■■■□ 3.65
PDCD2-201ENST00000167218 SCN11AQ9UI33 1791 aa37.85■■■■□ 3.65
PDCD2-201ENST00000167218 COL23A1Q86Y22 540 aaPredicted RBP37.85■■■■□ 3.65
PDCD2-201ENST00000167218 PPP2R1AP30153 589 aa37.84■■■■□ 3.65
PDCD2-201ENST00000167218 AKAP4Q5JQC9 854 aa37.83■■■■□ 3.65
PDCD2-201ENST00000167218 CABP4P57796 275 aa37.82■■■■□ 3.64
PDCD2-201ENST00000167218 ITPK1Q13572 414 aa37.81■■■■□ 3.64
PDCD2-201ENST00000167218 LINC00116Q8NCU8 138 aa37.81■■■■□ 3.64
PDCD2-201ENST00000167218 MTHFSDQ2M296 383 aaKnown RBP37.8■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms