RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 IP6K1Q92551 441 aa26.51■■□□□ 1.83
TRAPPC6A-201ENST00000006275 SLC12A5Q9H2X9 1139 aa26.51■■□□□ 1.83
TRAPPC6A-201ENST00000006275 ANKRD36BQ8N2N9 1353 aa26.49■■□□□ 1.83
TRAPPC6A-201ENST00000006275 COL24A1Q17RW2 1714 aa26.48■■□□□ 1.83
TRAPPC6A-201ENST00000006275 MSH5O43196 834 aa26.48■■□□□ 1.83
TRAPPC6A-201ENST00000006275 GRIN3BO60391 1043 aa26.48■■□□□ 1.83
TRAPPC6A-201ENST00000006275 IFFO2Q5TF58 517 aa26.48■■□□□ 1.83
TRAPPC6A-201ENST00000006275 TERF2IPQ9NYB0 399 aa26.48■■□□□ 1.83
TRAPPC6A-201ENST00000006275 USP47Q96K76 1375 aa26.47■■□□□ 1.83
TRAPPC6A-201ENST00000006275 YBX3P16989 372 aaKnown RBP eCLIP26.47■■□□□ 1.83
TRAPPC6A-201ENST00000006275 CCNL1Q9UK58 526 aaPredicted RBP26.47■■□□□ 1.83
TRAPPC6A-201ENST00000006275 SHANK3Q9BYB0 1731 aa26.46■■□□□ 1.83
TRAPPC6A-201ENST00000006275 TUBGCP6Q96RT7 1819 aa26.46■■□□□ 1.83
TRAPPC6A-201ENST00000006275 A0A1W2PP64 1363 aa26.46■■□□□ 1.83
TRAPPC6A-201ENST00000006275 NSD2O96028 1365 aa26.45■■□□□ 1.82
TRAPPC6A-201ENST00000006275 SLC24A1O60721 1099 aa26.44■■□□□ 1.82
TRAPPC6A-201ENST00000006275 TESK2Q96S53 571 aa26.44■■□□□ 1.82
TRAPPC6A-201ENST00000006275 FAM208AQ9UK61 1670 aaKnown RBP26.44■■□□□ 1.82
TRAPPC6A-201ENST00000006275 ZCRB1Q8TBF4 217 aaKnown RBP26.43■■□□□ 1.82
TRAPPC6A-201ENST00000006275 DOT1LQ8TEK3 1739 aa26.42■■□□□ 1.82
TRAPPC6A-201ENST00000006275 GOLGB1Q14789 3259 aaKnown RBP26.42■■□□□ 1.82
TRAPPC6A-201ENST00000006275 MSL1Q68DK7 614 aa26.41■■□□□ 1.82
TRAPPC6A-201ENST00000006275 COL23A1Q86Y22 540 aaPredicted RBP26.41■■□□□ 1.82
TRAPPC6A-201ENST00000006275 MAP3K19Q56UN5 1328 aa26.4■■□□□ 1.82
TRAPPC6A-201ENST00000006275 LY75O60449 1722 aa26.4■■□□□ 1.82
TRAPPC6A-201ENST00000006275 AMPHP49418 695 aa26.4■■□□□ 1.82
TRAPPC6A-201ENST00000006275 HOXC9P31274 260 aa26.39■■□□□ 1.82
TRAPPC6A-201ENST00000006275 COG3Q96JB2 828 aa26.39■■□□□ 1.82
TRAPPC6A-201ENST00000006275 ATP10DQ9P241 1426 aa26.39■■□□□ 1.81
TRAPPC6A-201ENST00000006275 PUS7Q96PZ0 661 aaKnown RBP26.38■■□□□ 1.81
TRAPPC6A-201ENST00000006275 MEGF6O75095 1541 aa26.38■■□□□ 1.81
TRAPPC6A-201ENST00000006275 TMF1P82094 1093 aa26.35■■□□□ 1.81
TRAPPC6A-201ENST00000006275 CEP350Q5VT06 3117 aa26.35■■□□□ 1.81
TRAPPC6A-201ENST00000006275 FBLN1P23142 703 aa26.34■■□□□ 1.81
TRAPPC6A-201ENST00000006275 GPBP1L1Q9HC44 474 aaPredicted RBP26.33■■□□□ 1.81
TRAPPC6A-201ENST00000006275 CD2APQ9Y5K6 639 aa26.32■■□□□ 1.8
TRAPPC6A-201ENST00000006275 USHBP1Q8N6Y0 703 aa26.3■■□□□ 1.8
TRAPPC6A-201ENST00000006275 FLAD1Q8NFF5 587 aa26.3■■□□□ 1.8
TRAPPC6A-201ENST00000006275 RAPGEF4Q8WZA2 1011 aa26.3■■□□□ 1.8
TRAPPC6A-201ENST00000006275 CGNL1Q0VF96 1302 aa26.3■■□□□ 1.8
TRAPPC6A-201ENST00000006275 NBPF6Q5VWK0 638 aa26.29■■□□□ 1.8
TRAPPC6A-201ENST00000006275 NBPF4Q96M43 638 aa26.29■■□□□ 1.8
TRAPPC6A-201ENST00000006275 RTL1A6NKG5 1358 aa26.29■■□□□ 1.8
TRAPPC6A-201ENST00000006275 RGPD2P0DJD1 1756 aa26.28■■□□□ 1.8
TRAPPC6A-201ENST00000006275 HMGB2P26583 209 aaKnown RBP26.28■■□□□ 1.8
TRAPPC6A-201ENST00000006275 EIF4G2P78344 907 aaKnown RBP eCLIP26.28■■□□□ 1.8
TRAPPC6A-201ENST00000006275 ZNF526Q8TF50 670 aaPredicted RBP26.28■■□□□ 1.8
TRAPPC6A-201ENST00000006275 RRS1Q15050 365 aaKnown RBP26.27■■□□□ 1.8
TRAPPC6A-201ENST00000006275 CDCA8Q53HL2 280 aa26.27■■□□□ 1.8
TRAPPC6A-201ENST00000006275 PALLDQ8WX93 1383 aa26.26■■□□□ 1.79
TRAPPC6A-201ENST00000006275 SMG6Q86US8 1419 aaKnown RBP26.25■■□□□ 1.79
TRAPPC6A-201ENST00000006275 TATP17735 454 aaPredicted RBP26.25■■□□□ 1.79
TRAPPC6A-201ENST00000006275 C5P01031 1676 aa26.25■■□□□ 1.79
TRAPPC6A-201ENST00000006275 ADCY9O60503 1353 aa26.24■■□□□ 1.79
TRAPPC6A-201ENST00000006275 HSPA6P17066 643 aa26.24■■□□□ 1.79
TRAPPC6A-201ENST00000006275 PCDH11XQ9BZA7 1347 aa26.23■■□□□ 1.79
TRAPPC6A-201ENST00000006275 PCDH11YQ9BZA8 1340 aa26.23■■□□□ 1.79
TRAPPC6A-201ENST00000006275 HSPA5P11021 654 aaKnown RBP26.23■■□□□ 1.79
TRAPPC6A-201ENST00000006275 MPRIPQ6WCQ1 1025 aa26.23■■□□□ 1.79
TRAPPC6A-201ENST00000006275 AK7Q96M32 723 aa26.22■■□□□ 1.79
TRAPPC6A-201ENST00000006275 WWC3Q9ULE0 1092 aa26.21■■□□□ 1.79
TRAPPC6A-201ENST00000006275 IGSF1Q8N6C5 1336 aa26.19■■□□□ 1.78
TRAPPC6A-201ENST00000006275 PHF14O94880 888 aa26.19■■□□□ 1.78
TRAPPC6A-201ENST00000006275 GGNBP2Q9H3C7 697 aa26.19■■□□□ 1.78
TRAPPC6A-201ENST00000006275 SMARCC1Q92922 1105 aaPredicted RBP26.18■■□□□ 1.78
TRAPPC6A-201ENST00000006275 FYB1O15117 783 aa26.16■■□□□ 1.78
TRAPPC6A-201ENST00000006275 AMIGO3Q86WK7 504 aa26.16■■□□□ 1.78
TRAPPC6A-201ENST00000006275 TAF1LQ8IZX4 1826 aa26.16■■□□□ 1.78
TRAPPC6A-201ENST00000006275 C4BP0C0L5 1744 aa26.15■■□□□ 1.78
TRAPPC6A-201ENST00000006275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.15■■□□□ 1.78
TRAPPC6A-201ENST00000006275 CYP27B1O15528 508 aa26.15■■□□□ 1.78
TRAPPC6A-201ENST00000006275 HSP90AB2PQ58FF8 381 aa26.15■■□□□ 1.78
TRAPPC6A-201ENST00000006275 INSRP06213 1382 aa26.15■■□□□ 1.78
TRAPPC6A-201ENST00000006275 NSD3Q9BZ95 1437 aa26.14■■□□□ 1.78
TRAPPC6A-201ENST00000006275 SMIM5Q71RC9 77 aa26.14■■□□□ 1.78
TRAPPC6A-201ENST00000006275 POLR3GLQ9BT43 218 aa26.13■■□□□ 1.77
TRAPPC6A-201ENST00000006275 FLT4P35916 1363 aa26.12■■□□□ 1.77
TRAPPC6A-201ENST00000006275 PIGBQ92521 554 aa26.11■■□□□ 1.77
TRAPPC6A-201ENST00000006275 SSFA2P28290 1259 aa26.1■■□□□ 1.77
TRAPPC6A-201ENST00000006275 TOGARAM1Q9Y4F4 1720 aa26.09■■□□□ 1.77
TRAPPC6A-201ENST00000006275 KIF3CO14782 793 aa26.09■■□□□ 1.77
TRAPPC6A-201ENST00000006275 UBR3Q6ZT12 1888 aa26.07■■□□□ 1.76
TRAPPC6A-201ENST00000006275 LOC102724428A0A0B4J2F2 783 aa26.07■■□□□ 1.76
TRAPPC6A-201ENST00000006275 SIK1P57059 783 aa26.07■■□□□ 1.76
TRAPPC6A-201ENST00000006275 LINC00116Q8NCU8 138 aa26.07■■□□□ 1.76
TRAPPC6A-201ENST00000006275 KIF24Q5T7B8 1368 aa26.07■■□□□ 1.76
TRAPPC6A-201ENST00000006275 ITGB4P16144 1822 aa26.04■■□□□ 1.76
TRAPPC6A-201ENST00000006275 GNPATO15228 680 aa26.04■■□□□ 1.76
TRAPPC6A-201ENST00000006275 NKX1-1Q15270 411 aaPredicted RBP26.03■■□□□ 1.76
TRAPPC6A-201ENST00000006275 SPG7Q9UQ90 795 aa26.03■■□□□ 1.76
TRAPPC6A-201ENST00000006275 APLP1P51693 650 aa26.02■■□□□ 1.76
TRAPPC6A-201ENST00000006275 TMOD3Q9NYL9 352 aa26.02■■□□□ 1.76
TRAPPC6A-201ENST00000006275 EMILIN1Q9Y6C2 1016 aa26.02■■□□□ 1.76
TRAPPC6A-201ENST00000006275 MMP10P09238 476 aa26.01■■□□□ 1.75
TRAPPC6A-201ENST00000006275 PKD1L3Q7Z443 1732 aa26.01■■□□□ 1.75
TRAPPC6A-201ENST00000006275 ATP6V1AP38606 617 aa26■■□□□ 1.75
TRAPPC6A-201ENST00000006275 ITPK1Q13572 414 aa26■■□□□ 1.75
TRAPPC6A-201ENST00000006275 ASAP1Q9ULH1 1129 aa26■■□□□ 1.75
TRAPPC6A-201ENST00000006275 CICQ96RK0 1608 aaPredicted RBP25.99■■□□□ 1.75
TRAPPC6A-201ENST00000006275 PPM1GO15355 546 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 235 ms