RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SLC4A10Q6U841 1118 aa17.28■□□□□ 0.36
USH1C-201ENST00000005226 CLEC17AQ6ZS10 378 aa17.28■□□□□ 0.36
USH1C-201ENST00000005226 RBSNQ9H1K0 784 aa17.28■□□□□ 0.36
USH1C-201ENST00000005226 ZDHHC9Q9Y397 364 aa17.28■□□□□ 0.36
USH1C-201ENST00000005226 CCDC173Q0VFZ6 552 aa17.27■□□□□ 0.36
USH1C-201ENST00000005226 MSH6P52701 1360 aa17.27■□□□□ 0.35
USH1C-201ENST00000005226 CYP2E1P05181 493 aaPredicted RBP17.27■□□□□ 0.35
USH1C-201ENST00000005226 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.35
USH1C-201ENST00000005226 PPP1R9BQ96SB3 815 aa17.27■□□□□ 0.35
USH1C-201ENST00000005226 NSFL1CQ9UNZ2 370 aaKnown RBP17.27■□□□□ 0.35
USH1C-201ENST00000005226 ATP10DQ9P241 1426 aa17.26■□□□□ 0.35
USH1C-201ENST00000005226 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
USH1C-201ENST00000005226 PRIM1P49642 420 aaKnown RBP17.26■□□□□ 0.35
USH1C-201ENST00000005226 NUCB2P80303 420 aa17.26■□□□□ 0.35
USH1C-201ENST00000005226 G2E3Q7L622 706 aa17.26■□□□□ 0.35
USH1C-201ENST00000005226 GPT2Q8TD30 523 aa17.26■□□□□ 0.35
USH1C-201ENST00000005226 EIF4A2Q14240 407 aaKnown RBP17.26■□□□□ 0.35
USH1C-201ENST00000005226 PREX1Q8TCU6 1659 aa17.26■□□□□ 0.35
USH1C-201ENST00000005226 DLG5Q8TDM6 1919 aa17.26■□□□□ 0.35
USH1C-201ENST00000005226 CPS1P31327 1500 aa17.26■□□□□ 0.35
USH1C-201ENST00000005226 RPAP2Q8IXW5 612 aaPredicted RBP17.25■□□□□ 0.35
USH1C-201ENST00000005226 ANP32BQ92688 251 aaKnown RBP17.25■□□□□ 0.35
USH1C-201ENST00000005226 RTL1A6NKG5 1358 aa17.25■□□□□ 0.35
USH1C-201ENST00000005226 RGS12O14924 1447 aa17.24■□□□□ 0.35
USH1C-201ENST00000005226 FOXO3O43524 673 aa17.24■□□□□ 0.35
USH1C-201ENST00000005226 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
USH1C-201ENST00000005226 KIAA1211Q6ZU35 1233 aa17.24■□□□□ 0.35
USH1C-201ENST00000005226 ATP7BP35670 1465 aa17.23■□□□□ 0.35
USH1C-201ENST00000005226 CHL1O00533 1208 aa17.23■□□□□ 0.35
USH1C-201ENST00000005226 FOXD4L6Q3SYB3 417 aaPredicted RBP17.23■□□□□ 0.35
USH1C-201ENST00000005226 FOXD4L3Q6VB84 417 aaPredicted RBP17.23■□□□□ 0.35
USH1C-201ENST00000005226 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
USH1C-201ENST00000005226 EXOC6BQ9Y2D4 811 aa17.23■□□□□ 0.35
USH1C-201ENST00000005226 CPSF1Q10570 1443 aaKnown RBP17.23■□□□□ 0.35
USH1C-201ENST00000005226 EDC4Q6P2E9 1401 aaKnown RBP17.23■□□□□ 0.35
USH1C-201ENST00000005226 ST18O60284 1047 aa17.23■□□□□ 0.35
USH1C-201ENST00000005226 HSP90AB2PQ58FF8 381 aa17.23■□□□□ 0.35
USH1C-201ENST00000005226 METP08581 1390 aa17.22■□□□□ 0.35
USH1C-201ENST00000005226 ZNF445P59923 1031 aa17.22■□□□□ 0.35
USH1C-201ENST00000005226 NEK4P51957 841 aa17.22■□□□□ 0.35
USH1C-201ENST00000005226 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
USH1C-201ENST00000005226 CCDC61Q9Y6R9 512 aa17.22■□□□□ 0.35
USH1C-201ENST00000005226 NEO1Q92859 1461 aa17.22■□□□□ 0.35
USH1C-201ENST00000005226 CDK12Q9NYV4 1490 aaPredicted RBP17.22■□□□□ 0.35
USH1C-201ENST00000005226 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.21■□□□□ 0.35
USH1C-201ENST00000005226 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
USH1C-201ENST00000005226 NECTIN2Q92692 538 aa17.21■□□□□ 0.35
USH1C-201ENST00000005226 ERC2O15083 957 aa17.2■□□□□ 0.34
USH1C-201ENST00000005226 TMEM63CQ9P1W3 806 aa17.2■□□□□ 0.34
USH1C-201ENST00000005226 SYCE3A1L190 88 aa17.2■□□□□ 0.34
USH1C-201ENST00000005226 PRR36Q9H6K5 1346 aa17.2■□□□□ 0.34
USH1C-201ENST00000005226 MSNP26038 577 aaKnown RBP17.2■□□□□ 0.34
USH1C-201ENST00000005226 PDE1AP54750 535 aa17.2■□□□□ 0.34
USH1C-201ENST00000005226 PALD1Q9ULE6 856 aa17.2■□□□□ 0.34
USH1C-201ENST00000005226 TPRNQ4KMQ1 711 aa17.19■□□□□ 0.34
USH1C-201ENST00000005226 RNF214Q8ND24 703 aa17.19■□□□□ 0.34
USH1C-201ENST00000005226 KIF24Q5T7B8 1368 aa17.19■□□□□ 0.34
USH1C-201ENST00000005226 AATKQ6ZMQ8 1374 aa17.19■□□□□ 0.34
USH1C-201ENST00000005226 RRP9O43818 475 aaKnown RBP17.19■□□□□ 0.34
USH1C-201ENST00000005226 REC8O95072 547 aa17.19■□□□□ 0.34
USH1C-201ENST00000005226 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
USH1C-201ENST00000005226 TMX3Q96JJ7 454 aa17.18■□□□□ 0.34
USH1C-201ENST00000005226 XPCQ01831 940 aaPredicted RBP17.18■□□□□ 0.34
USH1C-201ENST00000005226 IBTKQ9P2D0 1353 aaPredicted RBP17.17■□□□□ 0.34
USH1C-201ENST00000005226 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
USH1C-201ENST00000005226 RILPL2Q969X0 211 aa17.17■□□□□ 0.34
USH1C-201ENST00000005226 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.17■□□□□ 0.34
USH1C-201ENST00000005226 ZBTB7CA1YPR0 619 aa17.16■□□□□ 0.34
USH1C-201ENST00000005226 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
USH1C-201ENST00000005226 R3HCC1Q9Y3T6 440 aaKnown RBP17.16■□□□□ 0.34
USH1C-201ENST00000005226 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
USH1C-201ENST00000005226 OFD1O75665 1012 aa17.15■□□□□ 0.34
USH1C-201ENST00000005226 GDPD2Q9HCC8 539 aa17.15■□□□□ 0.34
USH1C-201ENST00000005226 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
USH1C-201ENST00000005226 TRIM6-TRIM34B2RNG4 842 aa17.15■□□□□ 0.34
USH1C-201ENST00000005226 MPNDQ8N594 471 aa17.15■□□□□ 0.34
USH1C-201ENST00000005226 PTPRCP08575 1304 aa17.14■□□□□ 0.34
USH1C-201ENST00000005226 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
USH1C-201ENST00000005226 UPF3BQ9BZI7 483 aaKnown RBP17.14■□□□□ 0.33
USH1C-201ENST00000005226 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
USH1C-201ENST00000005226 ANO2Q9NQ90 1003 aa17.14■□□□□ 0.33
USH1C-201ENST00000005226 DTNBO60941 627 aa17.13■□□□□ 0.33
USH1C-201ENST00000005226 HMMRO75330 724 aa17.13■□□□□ 0.33
USH1C-201ENST00000005226 UNC5CLQ8IV45 518 aa17.13■□□□□ 0.33
USH1C-201ENST00000005226 TPM2P07951 284 aa17.13■□□□□ 0.33
USH1C-201ENST00000005226 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
USH1C-201ENST00000005226 REREQ9P2R6 1566 aa17.13■□□□□ 0.33
USH1C-201ENST00000005226 TTC21BQ7Z4L5 1316 aa17.13■□□□□ 0.33
USH1C-201ENST00000005226 MAP4K4O95819 1239 aaPredicted RBP17.12■□□□□ 0.33
USH1C-201ENST00000005226 GLIPR1L2Q4G1C9 344 aa17.12■□□□□ 0.33
USH1C-201ENST00000005226 LRSAM1Q6UWE0 723 aa17.12■□□□□ 0.33
USH1C-201ENST00000005226 ACEP12821 1306 aa17.12■□□□□ 0.33
USH1C-201ENST00000005226 IL25Q9H293 177 aa17.12■□□□□ 0.33
USH1C-201ENST00000005226 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
USH1C-201ENST00000005226 KIAA0232Q92628 1395 aa17.11■□□□□ 0.33
USH1C-201ENST00000005226 GNAI2P04899 355 aa17.11■□□□□ 0.33
USH1C-201ENST00000005226 PDLIM2Q96JY6 352 aa17.11■□□□□ 0.33
USH1C-201ENST00000005226 LARP6Q9BRS8 491 aaKnown RBP17.11■□□□□ 0.33
USH1C-201ENST00000005226 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
USH1C-201ENST00000005226 IL1RAPL2Q9NP60 686 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms