RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Gm14025A2AP89 1413 aa22.32■■□□□ 1.16
Upf1-201ENSMUST00000075666 Dhx8A2A4P0 1244 aaKnown RBP22.31■■□□□ 1.16
Upf1-201ENSMUST00000075666 Nucb1Q02819 459 aaKnown RBP22.31■■□□□ 1.16
Upf1-201ENSMUST00000075666 Samd9lQ69Z37 1561 aa22.31■■□□□ 1.16
Upf1-201ENSMUST00000075666 Kdm4aQ8BW72 1064 aa22.31■■□□□ 1.16
Upf1-201ENSMUST00000075666 Grpel1Q99LP6 217 aa22.3■■□□□ 1.16
Upf1-201ENSMUST00000075666 Gdpd2Q9ESM6 539 aa22.3■■□□□ 1.16
Upf1-201ENSMUST00000075666 Nsfl1cQ9CZ44 370 aaKnown RBP22.3■■□□□ 1.16
Upf1-201ENSMUST00000075666 Pank2Q3U4S0 443 aa22.3■■□□□ 1.16
Upf1-201ENSMUST00000075666 Kdm3bQ6ZPY7 1562 aa22.3■■□□□ 1.16
Upf1-201ENSMUST00000075666 Brf1Q8CFK2 676 aa22.29■■□□□ 1.16
Upf1-201ENSMUST00000075666 PaskQ8CEE6 1383 aa22.29■■□□□ 1.16
Upf1-201ENSMUST00000075666 Tex14Q7M6U3 1450 aa22.29■■□□□ 1.16
Upf1-201ENSMUST00000075666 Cfap73J3QPZ5 306 aa22.29■■□□□ 1.16
Upf1-201ENSMUST00000075666 CebpzP53569 1052 aaKnown RBP22.29■■□□□ 1.16
Upf1-201ENSMUST00000075666 Bag1Q60739 355 aa22.28■■□□□ 1.16
Upf1-201ENSMUST00000075666 Tpm4Q6IRU2 248 aa22.28■■□□□ 1.16
Upf1-201ENSMUST00000075666 Ccdc66Q6NS45 935 aa22.28■■□□□ 1.16
Upf1-201ENSMUST00000075666 Aldh8a1Q8BH00 487 aa22.28■■□□□ 1.16
Upf1-201ENSMUST00000075666 Fkbp4P30416 458 aa22.28■■□□□ 1.16
Upf1-201ENSMUST00000075666 Zrsr2Q62377 462 aaKnown RBP22.28■■□□□ 1.16
Upf1-201ENSMUST00000075666 Fgd6Q69ZL1 1399 aa22.27■■□□□ 1.16
Upf1-201ENSMUST00000075666 Arhgef40Q3UPH7 1517 aa22.26■■□□□ 1.15
Upf1-201ENSMUST00000075666 Gm45140A0A0N4SUM8 220 aa22.26■■□□□ 1.15
Upf1-201ENSMUST00000075666 Lekr1B2RVN1 116 aa22.26■■□□□ 1.15
Upf1-201ENSMUST00000075666 Snx13Q6PHS6 957 aa22.26■■□□□ 1.15
Upf1-201ENSMUST00000075666 Usp25P57080 1055 aa22.25■■□□□ 1.15
Upf1-201ENSMUST00000075666 Nol8Q3UHX0 1147 aaKnown RBP22.25■■□□□ 1.15
Upf1-201ENSMUST00000075666 Map3k13Q1HKZ5 959 aa22.25■■□□□ 1.15
Upf1-201ENSMUST00000075666 Mindy4Q3UQI9 744 aa22.25■■□□□ 1.15
Upf1-201ENSMUST00000075666 Igbp1bQ9QZ29 343 aa22.25■■□□□ 1.15
Upf1-201ENSMUST00000075666 Ttc41Q692V3 1318 aa22.25■■□□□ 1.15
Upf1-201ENSMUST00000075666 Lmo7E9PYF4 1699 aaKnown RBP22.25■■□□□ 1.15
Upf1-201ENSMUST00000075666 Paxbp1P58501 919 aa22.24■■□□□ 1.15
Upf1-201ENSMUST00000075666 Vgll3P85442 326 aa22.24■■□□□ 1.15
Upf1-201ENSMUST00000075666 Zfp251Q6PCX8 632 aa22.24■■□□□ 1.15
Upf1-201ENSMUST00000075666 Chmp7Q8R1T1 451 aa22.24■■□□□ 1.15
Upf1-201ENSMUST00000075666 Elp1Q7TT37 1333 aaKnown RBP22.24■■□□□ 1.15
Upf1-201ENSMUST00000075666 Larp1bA0A0A6YXJ7 370 aaKnown RBP22.24■■□□□ 1.15
Upf1-201ENSMUST00000075666 Exoc6bA6H5Z3 810 aa22.24■■□□□ 1.15
Upf1-201ENSMUST00000075666 Cct4P80315 539 aaKnown RBP22.24■■□□□ 1.15
Upf1-201ENSMUST00000075666 Me1P06801 572 aa22.23■■□□□ 1.15
Upf1-201ENSMUST00000075666 Nat10Q8K224 1024 aaKnown RBP22.23■■□□□ 1.15
Upf1-201ENSMUST00000075666 PsapQ61207 557 aaKnown RBP22.23■■□□□ 1.15
Upf1-201ENSMUST00000075666 Jakmip2D3YXK0 820 aa22.23■■□□□ 1.15
Upf1-201ENSMUST00000075666 Irgm2A0A140LIF8 407 aa22.22■■□□□ 1.15
Upf1-201ENSMUST00000075666 Kcnj4P52189 445 aa22.22■■□□□ 1.15
Upf1-201ENSMUST00000075666 Mrc2Q64449 1479 aa22.22■■□□□ 1.15
Upf1-201ENSMUST00000075666 Vamp4O70480 141 aa22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Fez2Q6TYB5 348 aa22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Ppp1r3fQ9JIG4 799 aa22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Arid4aF8VPQ2 1261 aaKnown RBP22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Fam193aQ8CGI1 1231 aaKnown RBP22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Rhot2Q8JZN7 620 aa22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Mcm10Q0VBD2 885 aa22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Cep135Q6P5D4 1140 aa22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Fsd1Q7TPM6 496 aa22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 ZwintQ9CQU5 252 aa22.21■■□□□ 1.15
Upf1-201ENSMUST00000075666 Cfap157Q0VFX2 523 aa22.2■■□□□ 1.14
Upf1-201ENSMUST00000075666 Slx4ipQ9D7Y9 413 aa22.2■■□□□ 1.14
Upf1-201ENSMUST00000075666 Def6Q8C2K1 630 aa22.2■■□□□ 1.14
Upf1-201ENSMUST00000075666 Ssh2Q5SW75 1423 aa22.2■■□□□ 1.14
Upf1-201ENSMUST00000075666 Trim25Q61510 634 aaKnown RBP22.2■■□□□ 1.14
Upf1-201ENSMUST00000075666 Rufy1Q8BIJ7 712 aa22.2■■□□□ 1.14
Upf1-201ENSMUST00000075666 Neo1P97798 1493 aa22.19■■□□□ 1.14
Upf1-201ENSMUST00000075666 Eif5P59325 429 aaKnown RBP22.19■■□□□ 1.14
Upf1-201ENSMUST00000075666 Gnl2Q99LH1 728 aaKnown RBP22.19■■□□□ 1.14
Upf1-201ENSMUST00000075666 Krt82Q99M74 516 aa22.19■■□□□ 1.14
Upf1-201ENSMUST00000075666 Cyp27a1Q9DBG1 533 aa22.19■■□□□ 1.14
Upf1-201ENSMUST00000075666 EappQ5BU09 281 aa22.19■■□□□ 1.14
Upf1-201ENSMUST00000075666 Pik3r4Q8VD65 1358 aa22.19■■□□□ 1.14
Upf1-201ENSMUST00000075666 Antxr1Q9CZ52 562 aa22.19■■□□□ 1.14
Upf1-201ENSMUST00000075666 Gm45015A0A140LII9 184 aa22.18■■□□□ 1.14
Upf1-201ENSMUST00000075666 Gm18336A0A140LIU8 765 aa22.18■■□□□ 1.14
Upf1-201ENSMUST00000075666 SelenooQ9DBC0 667 aa22.18■■□□□ 1.14
Upf1-201ENSMUST00000075666 Ankrd50F7BE84 1390 aa22.18■■□□□ 1.14
Upf1-201ENSMUST00000075666 Klhdc4Q921I2 584 aa22.18■■□□□ 1.14
Upf1-201ENSMUST00000075666 Dnai2A2AC93 623 aa22.18■■□□□ 1.14
Upf1-201ENSMUST00000075666 Tbc1d8Q9Z1A9 1134 aa22.18■■□□□ 1.14
Upf1-201ENSMUST00000075666 Anp32cQ64G17 123 aa22.18■■□□□ 1.14
Upf1-201ENSMUST00000075666 Uri1Q3TLD5 531 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 Arglu1Q3UL36 271 aaKnown RBP22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 Lamb3Q61087 1168 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 Zranb1Q7M760 708 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 MicalclQ9D5U9 680 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 Gm16486A0A1D5RMD1 1434 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 Dync1i1O88485 628 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 ItpripQ3TNL8 555 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 Rapgef6Q5NCJ1 1609 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 AI481877A2ALV5 1481 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 Lrrc9Q8CDN9 1456 aa22.17■■□□□ 1.14
Upf1-201ENSMUST00000075666 Map9Q3TRR0 646 aa22.16■■□□□ 1.14
Upf1-201ENSMUST00000075666 TatQ8QZR1 454 aa22.16■■□□□ 1.14
Upf1-201ENSMUST00000075666 Ftsj3Q9DBE9 838 aaKnown RBP22.16■■□□□ 1.14
Upf1-201ENSMUST00000075666 Prpf4bQ61136 1007 aaKnown RBP22.16■■□□□ 1.14
Upf1-201ENSMUST00000075666 PtprgQ05909 1442 aa22.15■■□□□ 1.14
Upf1-201ENSMUST00000075666 Pla2r1Q62028 1487 aa22.15■■□□□ 1.14
Upf1-201ENSMUST00000075666 Zkscan16A2ALW2 728 aa22.15■■□□□ 1.14
Upf1-201ENSMUST00000075666 Gtf2f1Q3THK3 508 aaKnown RBP22.15■■□□□ 1.14
Upf1-201ENSMUST00000075666 Cep112Q5PR68 954 aa22.15■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 43.8 ms