RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 PTPRCAPQ14761 206 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 CHRNA6Q15825 494 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 KCTD11Q693B1 232 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 LRRTM4Q86VH4 590 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 LSMEM2Q8N112 164 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 TRIM58Q8NG06 486 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 GDAP1Q8TB36 358 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 RTP4Q96DX8 246 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 FEZ2Q9UHY8 353 aaPredicted RBP14.85□□□□□ -0.03
PHGDH-231ENST00000641939 SATB2Q9UPW6 733 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 ADAMTS20P59510 1910 aa14.85□□□□□ -0.03
PHGDH-231ENST00000641939 AHCTF1Q8WYP5 2266 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 GAPDHSO14556 408 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 KMOO15229 486 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 PPM1DO15297 605 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 PSMD3O43242 534 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 B4GAT1O43505 415 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A9O60656 530 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 DXOO77932 396 aaKnown RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 CRTAMO95727 393 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 EML2O95834 649 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A6P19224 532 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A1P22309 533 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A4P22310 534 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 ALDH4A1P30038 563 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A3P35503 534 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A5P35504 534 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 ACTN2P35609 894 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 GPR3P46089 330 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 CLCNKAP51800 687 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 OR1D5P58170 312 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 TMEM115Q12893 351 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 MSLNQ13421 630 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 OASLQ15646 514 aaKnown RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 TBC1D25Q3MII6 688 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 KHDC1Q4VXA5 237 aaKnown RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 C3orf38Q5JPI3 329 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 DENND5AQ6IQ26 1287 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 CRTC3Q6UUV7 619 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 B3GNT8Q7Z7M8 397 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 SFRP1Q8N474 314 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 OR4K2Q8NGD2 314 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 WDR36Q8NI36 951 aaKnown RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 SLC37A2Q8TED4 501 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 LIN37Q96GY3 246 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 TMEM74Q96NL1 305 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 FOXP3Q9BZS1 431 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 STRADBQ9C0K7 418 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 LRRC40Q9H9A6 602 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A7Q9HAW7 530 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A10Q9HAW8 530 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 UGT1A8Q9HAW9 530 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 KLC4Q9NSK0 619 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 TBC1D29Q9UFV1 150 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 ATXN7L1Q9ULK2 861 aaPredicted RBP14.84□□□□□ -0.03
PHGDH-231ENST00000641939 KCTD3Q9Y597 815 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 PTPRQQ9UMZ3 2332 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 PIKFYVEQ9Y2I7 2098 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 ITPR1Q14643 2758 aa14.84□□□□□ -0.03
PHGDH-231ENST00000641939 TRBV23OR9-2A0A075B6M9 112 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 CCDC187A0A096LP49 1063 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 A0A1W2PNU3 283 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-231ENST00000641939 A6NCN8 305 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 TLX3O43711 291 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-231ENST00000641939 SNX2O60749 519 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 PRAMEF1O95521 474 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 AP2A1O95782 977 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 SLC2A4P14672 509 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF7P17097 686 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-231ENST00000641939 CCKBRP32239 447 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 FASLGP48023 281 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 INHBCP55103 352 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 SNX1Q13596 522 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 GTF2H3Q13889 308 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 INSCQ1MX18 579 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 PLA2G4EQ3MJ16 856 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 AMZ1Q400G9 498 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 LDLRAP1Q5SW96 308 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 IYDQ6PHW0 289 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 IGF2-ASQ6U949 168 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF547Q8IVP9 402 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 SNIP1Q8TAD8 396 aaKnown RBP14.83□□□□□ -0.04
PHGDH-231ENST00000641939 C1orf54Q8WWF1 131 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 FGF11Q92914 225 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF578Q96N58 590 aaPredicted RBP14.83□□□□□ -0.04
PHGDH-231ENST00000641939 TTC25Q96NG3 672 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 C19orf43Q9BQ61 176 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 TIMM29Q9BSF4 260 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 TLR10Q9BXR5 811 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 ZCCHC2Q9C0B9 1178 aaKnown RBP14.83□□□□□ -0.04
PHGDH-231ENST00000641939 EPB41L5Q9HCM4 733 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 SMOXQ9NWM0 555 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 SLC23A2Q9UGH3 650 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 ZNF148Q9UQR1 794 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 PCDHGA8Q9Y5G5 932 aa14.83□□□□□ -0.04
PHGDH-231ENST00000641939 KIR2DS5A0A0G2JLQ3 304 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 A0A0G2JNG1 304 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 OR5K4A6NMS3 321 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 KIR2DS3K7RE56 304 aa14.82□□□□□ -0.04
PHGDH-231ENST00000641939 GPR39O43194 453 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms