RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 CROCCP2Q86T23 111 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 TDRPQ86YL5 185 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 CLDN19Q8N6F1 224 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 GOLGA6L1Q8N7Z2 621 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 DDHD1Q8NEL9 900 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 LPGAT1Q92604 370 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 VPS39Q96JC1 886 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 NDNQ99608 321 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 TMEM109Q9BVC6 243 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 CNOT6Q9ULM6 557 aaKnown RBP17.3■□□□□ 0.36
PHGDH-230ENST00000641927 DMTF1Q9Y222 760 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 EML5Q05BV3 1969 aa17.3■□□□□ 0.36
PHGDH-230ENST00000641927 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 A0A1W2PPC4 97 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 POM121BA6NF01 834 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 H0Y8X5 98 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 PRMT5O14744 637 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 RGS16O15492 202 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 ASMTLO95671 621 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 ITGA2BP08514 1039 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 NUDT1P36639 197 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 NSG1P42857 185 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 LIMK2P53671 638 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 ARMCX6Q7L4S7 300 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 RIBC1Q8N443 379 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 FOXJ1Q92949 421 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 ELMO2Q96JJ3 720 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 LGR4Q9BXB1 951 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 MIR1-1HGQ9H1L0 117 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 C11orf16Q9NQ32 467 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 PHPT1Q9NRX4 125 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 C10orf142B7Z368 130 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 AGPSO00116 658 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 GPR37L1O60883 481 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 KRT15P19012 456 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 ANGPT1Q15389 498 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 KHDC1Q4VXA5 237 aaKnown RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 PTRHD1Q6GMV3 140 aaKnown RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 LPCAT2Q7L5N7 544 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 RGL4Q8IZJ4 473 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 HEXDCQ8WVB3 486 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 GAB3Q8WWW8 586 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 FUBP1Q96AE4 644 aaKnown RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 TEX101Q9BY14 249 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 FAM126AQ9BYI3 521 aaPredicted RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 ZCCHC2Q9C0B9 1178 aaKnown RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 AASDHPPTQ9NRN7 309 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 EIF2B4Q9UI10 523 aaKnown RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 TMEM98Q9Y2Y6 226 aa17.29■□□□□ 0.36
PHGDH-230ENST00000641927 MTO1Q9Y2Z2 717 aaKnown RBP17.29■□□□□ 0.36
PHGDH-230ENST00000641927 PLXNB3Q9ULL4 1909 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 FAM95CA0A1B0GW59 222 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 TRIM49D1C9J1S8 452 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 CACNB4O00305 520 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-230ENST00000641927 ATP8B1O43520 1251 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 SNRPAP09012 282 aaKnown RBP17.28■□□□□ 0.36
PHGDH-230ENST00000641927 CNTFP26441 200 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 CD27P26842 260 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 MAOBP27338 520 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 TEAD1P28347 426 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 TRIM23P36406 574 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 B4GALNT1Q00973 533 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 TMEM115Q12893 351 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-230ENST00000641927 GTF2H3Q13889 308 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 RBM20Q5T481 1227 aaKnown RBP17.28■□□□□ 0.36
PHGDH-230ENST00000641927 GCNT7Q6ZNI0 430 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 SLC41A1Q8IVJ1 513 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 FAM136AQ96C01 138 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 MCMBPQ9BTE3 642 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 APOOQ9BUR5 198 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 OR2AG1Q9H205 316 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 TRIM39Q9HCM9 518 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 GNPTGQ9UJJ9 305 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 SLC39A10Q9ULF5 831 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 OAS3Q9Y6K5 1087 aaKnown RBP17.28■□□□□ 0.36
PHGDH-230ENST00000641927 PLXND1Q9Y4D7 1925 aa17.28■□□□□ 0.36
PHGDH-230ENST00000641927 IGLV3-16A0A075B6K0 115 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 OR2AG2A6NM03 316 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 PRR33A8MZF0 331 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 OPA1O60313 960 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 ESR1P03372 595 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 MYCLP1P12525 358 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-230ENST00000641927 ATP1B2P14415 290 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-230ENST00000641927 PKMP14618 531 aaKnown RBP17.27■□□□□ 0.36
PHGDH-230ENST00000641927 SLC12A2P55011 1212 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 PDE1CQ14123 709 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-230ENST00000641927 USP10Q14694 798 aaKnown RBP17.27■□□□□ 0.36
PHGDH-230ENST00000641927 RASA2Q15283 850 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 ZNF549Q6P9A3 640 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 CEP68Q76N32 757 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 C11orf74Q86VG3 221 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 CYP4X1Q8N118 509 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 DCLK2Q8N568 766 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 TMEM145Q8NBT3 493 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 ACVR1CQ8NER5 493 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 SGF29Q96ES7 293 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 COX14Q96I36 57 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 BMFQ96LC9 184 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 SLC6A18Q96N87 628 aa17.27■□□□□ 0.36
PHGDH-230ENST00000641927 BIRC8Q96P09 236 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms