RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 GBF1Q92538 1859 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 LCHNA4D1U4 455 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 INSIG1O15503 277 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 ACSL4O60488 711 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 KATNA1O75449 491 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 EOMESO95936 686 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 PENKP01210 267 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-223ENST00000641597 RPS17P08708 135 aaKnown RBP16.68■□□□□ 0.26
PHGDH-223ENST00000641597 CTPS1P17812 591 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 OGNP20774 298 aaKnown RBP16.68■□□□□ 0.26
PHGDH-223ENST00000641597 PIK3CGP48736 1102 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 MAPKAPK2P49137 400 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 ATP4BP51164 291 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 OXCT1P55809 520 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 FCGRTP55899 365 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 SEMG2Q02383 582 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 USP41Q3LFD5 358 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 B3GNT6Q6ZMB0 384 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 CHST15Q7LFX5 561 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-223ENST00000641597 ZFRQ96KR1 1074 aaKnown RBP16.68■□□□□ 0.26
PHGDH-223ENST00000641597 TDRD1Q9BXT4 1180 aaKnown RBP16.68■□□□□ 0.26
PHGDH-223ENST00000641597 HSFX1Q9UBD0 423 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 RAI2Q9Y5P3 530 aa16.68■□□□□ 0.26
PHGDH-223ENST00000641597 hCG_2014768A0A024R1R8 64 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 SLC38A8A6NNN8 435 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 H3BNH8 94 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 C1RP00736 705 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 EPOP01588 193 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 ASLP04424 464 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 HSPA8P11142 646 aaKnown RBP16.67■□□□□ 0.26
PHGDH-223ENST00000641597 LIPEQ05469 1076 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 TRAF2Q12933 501 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 LETMD1Q6P1Q0 360 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 ABI1Q8IZP0 508 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 CD200R1Q8TD46 325 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 TFAP2CQ92754 450 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 RNF38Q9H0F5 515 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 SCUBE2Q9NQ36 999 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 MRPL40Q9NQ50 206 aaKnown RBP16.67■□□□□ 0.26
PHGDH-223ENST00000641597 AGO1Q9UL18 857 aaKnown RBP16.67■□□□□ 0.26
PHGDH-223ENST00000641597 A8MX80 341 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 TMEM189-UBE2V1I3L0A0 370 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 ALPIP09923 528 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 BMP2P12643 396 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 GGT5P36269 586 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 NR1H2P55055 460 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 ERVPABLB-1P60509 514 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 CTBSQ01459 385 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 SELPLGQ14242 412 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 ATXN7L2Q5T6C5 722 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-223ENST00000641597 PPP4R4Q6NUP7 873 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 TAS2R42Q7RTR8 314 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 ZNF786Q8N393 782 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 MINDY1Q8N5J2 469 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 DBF4BQ8NFT6 615 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 ZNF599Q96NL3 588 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 TCF12Q99081 682 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 ALG2Q9H553 416 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 AGPAT4Q9NRZ5 378 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 PTTG2Q9NZH5 202 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 CD274Q9NZQ7 290 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 SEPT3Q9UH03 358 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 CASP8AP2Q9UKL3 1982 aa16.67■□□□□ 0.26
PHGDH-223ENST00000641597 FAM155AB1AL88 458 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 EI24O14681 340 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 COCHO43405 550 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 CD160O95971 181 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 CNPP09543 421 aaKnown RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 CR2P20023 1033 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 DGKQP52824 942 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 GPR17Q13304 367 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 GPNMBQ14956 572 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 FUT10Q6P4F1 479 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 ANKFN1Q8N957 763 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 RMND5BQ96G75 393 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 EFHD1Q9BUP0 239 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 OLA1Q9NTK5 396 aaKnown RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 ARMC1Q9NVT9 282 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 MAGED1Q9Y5V3 778 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 RNF103-CHMP3A0A140T963 221 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 K7ERQ8 282 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 E2F3O00716 465 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 SYN3O14994 580 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 RSL1D1O76021 490 aaKnown RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 ZDHHC11BP0C7U3 371 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 GKP32189 559 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 YAP1P46937 504 aaKnown RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 OR4D2P58180 307 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 ATP6V0D1P61421 351 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 FAM189BP81408 668 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 ARF5P84085 180 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 CREB5Q02930 508 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 TWF1Q12792 350 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 DYNC1I2Q13409 638 aaKnown RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 LAMB3Q13751 1172 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 RNF219Q5W0B1 726 aaPredicted RBP16.66■□□□□ 0.26
PHGDH-223ENST00000641597 TBPL2Q6SJ96 375 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 AFTPHQ6ULP2 937 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 Q6ZSR9 355 aa16.66■□□□□ 0.26
PHGDH-223ENST00000641597 FNDC5Q8NAU1 212 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms