RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NANOGQ9H9S0 305 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 SYTL2Q9HCH5 934 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 ATP13A1Q9HD20 1204 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 PRDM5Q9NQX1 630 aaPredicted RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 LMCD1Q9NZU5 365 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 HCSTQ9UBK5 93 aa14.48□□□□□ -0.09
SCARB2-221ENST00000640341 TRMT6Q9UJA5 497 aaKnown RBP14.48□□□□□ -0.09
SCARB2-221ENST00000640341 ATE1O95260 518 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 FGF1P05230 155 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 ASGR1P07306 291 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 HTR6P50406 440 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 PSMD7P51665 324 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 CLCN2P51788 898 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 IL1RL1Q01638 556 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 KCTD21Q4G0X4 260 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 ARTNQ5T4W7 220 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 FRA10AC1Q70Z53 315 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 OR6K2Q8NGY2 324 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 FUBP1Q96AE4 644 aaKnown RBP14.47□□□□□ -0.09
SCARB2-221ENST00000640341 TMEM125Q96AQ2 219 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 MYRFLQ96LU7 910 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 APOL5Q9BWW9 433 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 OAS3Q9Y6K5 1087 aaKnown RBP14.47□□□□□ -0.09
SCARB2-221ENST00000640341 LOC285095A0A1B0GVY8 99 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 A0A1W2PP18 115 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 AQP12BA6NM10 295 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 TLR5O60602 858 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 ALBP02768 609 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 ALDH3B2P48448 385 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 BNIP3Q12983 259 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 SLC14A2Q15849 920 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 ATP6AP1LQ52LC2 224 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 PHYKPLQ8IUZ5 450 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 AQP12AQ8IXF9 295 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 FAM126BQ8IXS8 530 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 MINDY1Q8N5J2 469 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 BPIFB6Q8NFQ5 453 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 SLC39A13Q96H72 371 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 FBXO44Q9H4M3 255 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 SMPD3Q9NY59 655 aaPredicted RBP14.47□□□□□ -0.09
SCARB2-221ENST00000640341 NYNRINQ9P2P1 1898 aaKnown RBP14.47□□□□□ -0.09
SCARB2-221ENST00000640341 KERAO60938 352 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 HLA-DPA1P20036 260 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 MC4RP32245 332 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 CCT8P50990 548 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 PIGFQ07326 219 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 BNIP2Q12982 314 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 DUSP4Q13115 394 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 USP41Q3LFD5 358 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 VARS2Q5ST30 1063 aaKnown RBP14.47□□□□□ -0.09
SCARB2-221ENST00000640341 GLYATQ6IB77 296 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 GPSM1Q86YR5 675 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 BIRC7Q96CA5 298 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 C1orf74Q96LT6 269 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 ZFP14Q9HCL3 533 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 ZNF225Q9UK10 706 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 GPR45Q9Y5Y3 372 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 U3KQV3 271 aa14.47□□□□□ -0.09
SCARB2-221ENST00000640341 ASPDHA6ND91 283 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 MOXD2PA6NHM9 499 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 F5H5T6 163 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 GNGT2O14610 69 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 VARSP26640 1264 aaKnown RBP14.46□□□□□ -0.09
SCARB2-221ENST00000640341 IL12AP29459 219 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 CREB5Q02930 508 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 IL10RBQ08334 325 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 TRAF2Q12933 501 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 SELPLGQ14242 412 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 IMPG1Q17R60 797 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 LDLRAP1Q5SW96 308 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 C8orf82Q6P1X6 216 aaPredicted RBP14.46□□□□□ -0.09
SCARB2-221ENST00000640341 PRMT9Q6P2P2 845 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 ABRAXAS1Q6UWZ7 409 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 MILR1Q7Z6M3 343 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 SERINC5Q86VE9 423 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 HS3ST5Q8IZT8 346 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 PARP8Q8N3A8 854 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 MDGA1Q8NFP4 955 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 CLHC1Q8NHS4 586 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.46□□□□□ -0.092e-7■■■■■ 62.8
SCARB2-221ENST00000640341 KIAA1191Q96A73 305 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 NSMCE2Q96MF7 247 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 MUS81Q96NY9 551 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 C17orf80Q9BSJ5 609 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 THUMPD3Q9BV44 507 aaKnown RBP14.46□□□□□ -0.09
SCARB2-221ENST00000640341 ZFYVE28Q9HCC9 887 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 EXD2Q9NVH0 621 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 WARS2Q9UGM6 360 aaKnown RBP14.46□□□□□ -0.09
SCARB2-221ENST00000640341 DOLKQ9UPQ8 538 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 PCDHB5Q9Y5E4 795 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 NOBOXO60393 691 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 PENKP01210 267 aaPredicted RBP14.46□□□□□ -0.09
SCARB2-221ENST00000640341 CAPNS1P04632 268 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 CAPN1P07384 714 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 RAB39AQ14964 217 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 TMTC4Q5T4D3 741 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 DENND1CQ8IV53 801 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 SEPT8Q92599 483 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 SGCDQ92629 289 aa14.46□□□□□ -0.09
SCARB2-221ENST00000640341 TFB2MQ9H5Q4 396 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms