RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 COX4I1P13073 169 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 ARSAP15289 507 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 RPS9P46781 194 aaKnown RBP13.76□□□□□ -0.21
ATRIP-208ENST00000639561 OR4D1Q15615 310 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 MFN1Q8IWA4 741 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 BBS7Q8IWZ6 715 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 RYBPQ8N488 228 aaPredicted RBP13.76□□□□□ -0.21
ATRIP-208ENST00000639561 TTC30BQ8N4P2 665 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 OR6K2Q8NGY2 324 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 MAELQ96JY0 434 aaKnown RBP13.76□□□□□ -0.21
ATRIP-208ENST00000639561 PANX3Q96QZ0 392 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 IER2Q9BTL4 223 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 TM6SF2Q9BZW4 377 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 POPDC3Q9HBV1 291 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 G3BP2Q9UN86 482 aaKnown RBP13.76□□□□□ -0.21
ATRIP-208ENST00000639561 FNDC3AQ9Y2H6 1198 aaKnown RBP13.76□□□□□ -0.21
ATRIP-208ENST00000639561 PCDHB9Q9Y5E1 797 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 WDFY4Q6ZS81 3184 aa13.76□□□□□ -0.21
ATRIP-208ENST00000639561 TYW5A2RUC4 315 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 SDHDO14521 159 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 UBFD1O14562 309 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 GPR39O43194 453 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 SMAD6O43541 496 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 ITGAXP20702 1163 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 PIK3R1P27986 724 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 FMO4P31512 558 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 NFKB2Q00653 900 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 ACAD11Q709F0 780 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 CUZD1Q86UP6 607 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 SLC22A9Q8IVM8 553 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 MRPS31Q92665 395 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 EXT2Q93063 718 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 CLDN23Q96B33 292 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 EID2BQ96D98 161 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 MARK4Q96L34 752 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 BIRC8Q96P09 236 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 C8orf33Q9H7E9 229 aaPredicted RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 SPATA6Q9NWH7 488 aaPredicted RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 FIS1Q9Y3D6 152 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 PIAS3Q9Y6X2 628 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 FANCMQ8IYD8 2048 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 LAMTOR5O43504 91 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 OR1I1O60431 355 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 SKAP2O75563 359 aaPredicted RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 SNUPNO95149 360 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 MTHFD2P13995 350 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 TSPAN8P19075 237 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 IMPDH1P20839 514 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 PRDX6P30041 224 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 MC4RP32245 332 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 PPARGP37231 505 aaPredicted RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 ERFP50548 548 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 CCNG1P51959 295 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 ILF2Q12905 390 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 PDAP1Q13442 181 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 RCN1Q15293 331 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 ZNF678Q5SXM1 525 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 NXNQ6DKJ4 435 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 PAQR3Q6TCH7 311 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 RIPOR1Q6ZS17 1223 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 BPIFB1Q8TDL5 484 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 DDI1Q8WTU0 396 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 RSPRY1Q96DX4 576 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 CATSPER2Q96P56 530 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 SMG9Q9H0W8 520 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 THG1LQ9NWX6 298 aaKnown RBP13.75□□□□□ -0.21
ATRIP-208ENST00000639561 GALPQ9UBC7 116 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 FBXO4Q9UKT5 387 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 IKZF3Q9UKT9 509 aa13.75□□□□□ -0.21
ATRIP-208ENST00000639561 PRR23AA6NEV1 266 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 RHOBTB1O94844 696 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 SORBS2O94875 1100 aaKnown RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 PSMG1O95456 288 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 CD72P21854 359 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 PTDSS1P48651 473 aaKnown RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 SLC7A9P82251 487 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 CUL3Q13618 768 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 EML3Q32P44 896 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 HTR3DQ70Z44 454 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 NET1Q7Z628 596 aaPredicted RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 CPSF7Q8N684 471 aaKnown RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 CELF5Q8N6W0 485 aaKnown RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 FAM3CQ92520 227 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 L3HYPDHQ96EM0 354 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 ATOH8Q96SQ7 321 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 SLC30A3Q99726 388 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 CCDC28BQ9BUN5 200 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 MYOFQ9NZM1 2061 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 UBXN8O00124 270 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 ARNTLO00327 626 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 NDUFS3O75489 264 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 SRP72O76094 671 aaKnown RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 ALPIP09923 528 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 BTKQ06187 659 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 GALNT1Q10472 559 aaPredicted RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 TRMT5Q32P41 509 aaKnown RBP13.74□□□□□ -0.21
ATRIP-208ENST00000639561 ZNF528Q3MIS6 628 aa13.74□□□□□ -0.21
ATRIP-208ENST00000639561 UNC50Q53HI1 259 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms