RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TECP42680 631 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 CDH11P55287 796 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 MAZP56270 477 aaKnown RBP4.29□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF484Q5JVG2 852 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 METAP1DQ6UB28 335 aaPredicted RBP4.29□□□□□ -1.72
SCN3A-209ENST00000639244 MB21D1Q8N884 522 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 EIF1ADQ8N9N8 165 aaKnown RBP4.29□□□□□ -1.72
SCN3A-209ENST00000639244 CLRN3Q8NCR9 226 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 SETD6Q8TBK2 473 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 WNT8BQ93098 351 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 EVA1AQ9H8M9 152 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 HAO1Q9UJM8 370 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 ACTL7AQ9Y615 435 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 CLCA3PQ9Y6N3 262 aa4.29□□□□□ -1.72
SCN3A-209ENST00000639244 LRRC9Q6ZRR7 1453 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TEX13CA0A0J9YWL9 993 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 USP17L10C9JJH3 530 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 M0QZK8 103 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF213O14771 459 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 VILLO15195 856 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 AKR7A3O95154 331 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CSF1RP07333 972 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CKMT2P17540 419 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NT5EP21589 574 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MTF1Q14872 753 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 UBAP2Q5T6F2 1119 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ERN2Q76MJ5 926 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 RASGRP3Q8IV61 690 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZFP28Q8NHY6 868 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 HTRA1Q92743 480 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DLG3Q92796 817 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 FOPNLQ96NB1 174 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SPHK1Q9NYA1 384 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DNMT3LQ9UJW3 386 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 AAR2Q9Y312 384 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SRPRBQ9Y5M8 271 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 KLF2Q9Y5W3 355 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZFC3H1O60293 1989 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DOCK9Q9BZ29 2069 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TNKSO95271 1327 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 KDM3AQ9Y4C1 1321 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF729A6NN14 1252 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 FCHO1O14526 889 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CLPXO76031 633 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TP53P04637 393 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 GJB2P29033 226 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PTPN6P29350 595 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CRHR1P34998 444 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CCR10P46092 362 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF846Q147U1 533 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 OXA1LQ15070 435 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 RNF212Q495C1 297 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 HACD4Q5VWC8 232 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DCLRE1AQ6PJP8 1040 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CCNI2Q6ZMN8 369 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 THAP5Q7Z6K1 395 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DHFR2Q86XF0 187 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ARHGEF19Q8IW93 802 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 STOML3Q8TAV4 291 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NTAN1Q96AB6 310 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PGAP3Q96FM1 320 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 C7orf50Q9BRJ6 194 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 GAREM1Q9H706 876 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 AGO3Q9H9G7 860 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CCM2LQ9NUG4 571 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 LRP2BPQ9P2M1 347 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PHIPQ8WWQ0 1821 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NFKBIEO00221 500 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SULT1C2O00338 296 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 H2AFB2P0C5Z0 115 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CYP2C8P10632 490 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MC4RP32245 332 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NNMTP40261 264 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SCAND1P57086 179 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 RGS8P57771 180 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 BIKQ13323 160 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CCINQ13939 588 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 AP5B1Q2VPB7 878 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ARHGAP40Q5TG30 622 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SLC35F6Q8N357 371 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 EMC1Q8N766 993 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF596Q8TC21 504 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PBKQ96KB5 322 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CDC6Q99741 560 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 AAASQ9NRG9 546 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 GSN-AS1Q9NRJ2 163 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CENPMQ9NSP4 180 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NPAP1Q9NZP6 1156 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 BTNL2Q9UIR0 455 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SLC6A14Q9UN76 642 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MGAT4BQ9UQ53 548 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SLC12A7Q9Y666 1083 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 POMT1Q9Y6A1 747 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PIK3C2GO75747 1445 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 COL15A1P39059 1388 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 A0A0A0MRY4 1105 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 BCLAF3A2AJT9 711 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DYNC1LI2O43237 492 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MT-ATP6P00846 226 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NR2F1P10589 423 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms