RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 MFSD3Q96ES6 412 aa5.49□□□□□ -1.53
CHD2-227ENST00000637572 DNAJC1Q96KC8 554 aaKnown RBP5.49□□□□□ -1.53
CHD2-227ENST00000637572 FERD3LQ96RJ6 166 aa5.49□□□□□ -1.53
CHD2-227ENST00000637572 SYNDIG1Q9H7V2 258 aa5.49□□□□□ -1.53
CHD2-227ENST00000637572 POPDC3Q9HBV1 291 aa5.49□□□□□ -1.53
CHD2-227ENST00000637572 MARCH5Q9NX47 278 aa5.49□□□□□ -1.53
CHD2-227ENST00000637572 XPR1Q9UBH6 696 aa5.49□□□□□ -1.53
CHD2-227ENST00000637572 TDRKHQ9Y2W6 561 aaKnown RBP5.49□□□□□ -1.53
CHD2-227ENST00000637572 FAM32AQ9Y421 112 aaKnown RBP5.49□□□□□ -1.53
CHD2-227ENST00000637572 CCDC160A6NGH7 325 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ULK1O75385 1050 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 PIGNO95427 931 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 BPGMP07738 259 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 GJA1P17302 382 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ATF4P18848 351 aaPredicted RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 HPCAL1P37235 193 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 RXRGP48443 463 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 HNRNPH2P55795 449 aaKnown RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 TMEM240Q5SV17 173 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ESRP1Q6NXG1 681 aaKnown RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 GPRIN3Q6ZVF9 776 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 RRM2BQ7LG56 351 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 BBS7Q8IWZ6 715 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 MIER2Q8N344 545 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 HDDC3Q8N4P3 179 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ZMIZ2Q8NF64 920 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ISG20Q96AZ6 181 aaKnown RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 FAM136AQ96C01 138 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 CDKN2AIPNLQ96HQ2 116 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 PIWIL1Q96J94 861 aaKnown RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 RPL10LQ96L21 214 aaKnown RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 ECSITQ9BQ95 431 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 MIEF1Q9NQG6 463 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 SELENONQ9NZV5 590 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 CD207Q9UJ71 328 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ASF1AQ9Y294 204 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ACACBO00763 2458 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 C2orf71A6NGG8 1288 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 FAM159BA6NKW6 160 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 J3KR12 359 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 CNTN5O94779 1100 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 PCNAP12004 261 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 GNSP15586 552 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 PKNOX1P55347 436 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 SATB1Q01826 763 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 RUNX3Q13761 415 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 DHCR24Q15392 516 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 TTMPQ5BVD1 217 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 SULT1C3Q6IMI6 304 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 UBE2R2Q712K3 238 aaPredicted RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 CEP68Q76N32 757 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 RTN4RL1Q86UN2 441 aaPredicted RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 ZNF513Q8N8E2 541 aaPredicted RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 VN1R2Q8NFZ6 395 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 KCTD4Q8WVF5 259 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 FATE1Q969F0 183 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 NUS1Q96E22 293 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 CYP2S1Q96SQ9 504 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 FAIM2Q9BWQ8 316 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 KLF16Q9BXK1 252 aaPredicted RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 TFB2MQ9H5Q4 396 aaKnown RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 NOD2Q9HC29 1040 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 UTRNP46939 3433 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 AIM2O14862 343 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 TSPAN6O43657 245 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 AMD1P17707 334 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 TLX1P31314 330 aaPredicted RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 CLNS1AP54105 237 aaKnown RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 AP1S2P56377 157 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 SESN3P58005 492 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 OVGP1Q12889 678 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 CBLBQ13191 982 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ZNF805Q5CZA5 627 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 SIRPB2Q5JXA9 342 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ATXN7L2Q5T6C5 722 aaPredicted RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 C14orf80Q86SX3 495 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 PIP4K2CQ8TBX8 421 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 SELENOMQ8WWX9 145 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 JADE3Q92613 823 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 RAD51AP1Q96B01 352 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 OSBPL7Q9BZF2 842 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 RUBCNLQ9H714 662 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 COG4Q9H9E3 785 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 USP29Q9HBJ7 922 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 TEX264Q9Y6I9 313 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 ADAMTSL1Q8N6G6 1762 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 SNAP91O60641 907 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 MAFKO60675 156 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 PGLSO95336 258 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 HOXB2P14652 356 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 CCND1P24385 295 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 PRKCHP24723 683 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 NMBRP28336 390 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 NUDT1P36639 197 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 PLA2G5P39877 138 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 CSNK1DP48730 415 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 MCCD1P59942 119 aaPredicted RBP5.48□□□□□ -1.53
CHD2-227ENST00000637572 RGS1Q08116 209 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 LMAN2Q12907 356 aa5.48□□□□□ -1.53
CHD2-227ENST00000637572 GALNTL6Q49A17 601 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms