RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 CYP2S1Q96SQ9 504 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 UGT2B28Q9BY64 529 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 ZCWPW1Q9H0M4 648 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 FBXO44Q9H4M3 255 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TFB2MQ9H5Q4 396 aaKnown RBP3.96□□□□□ -1.78
SCN1A-214ENST00000637038 RHBDL2Q9NX52 303 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TMEM181Q9P2C4 612 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 TRPV2Q9Y5S1 764 aa3.96□□□□□ -1.78
SCN1A-214ENST00000637038 UBXN8O00124 270 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 NRP1O14786 923 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 TRIM24O15164 1050 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 INPP4BO15327 924 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 ATG13O75143 517 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 GPR32O75388 356 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 PAGE1O75459 146 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 MATN4O95460 622 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 BCL10O95999 233 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 HOXD8P13378 290 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RHOQP17081 205 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 SMPD1P17405 629 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 FGFR3P22607 806 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CASP2P42575 452 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 ALDH3B2P48448 385 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 MS4A2Q01362 244 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 NRG1Q02297 640 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RALGDSQ12967 914 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 MAD2L1Q13257 205 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 TUBA3CQ13748 450 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 LRP8Q14114 963 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 C16orf72Q14CZ0 275 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 NFE2Q16621 373 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 C9orf50Q5SZB4 431 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 LHX8Q68G74 356 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 HFE2Q6ZVN8 426 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 PTAR1Q7Z6K3 402 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CLEC4FQ8N1N0 589 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CBR4Q8N4T8 237 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 TRPV3Q8NET8 790 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 TWIST2Q8WVJ9 160 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 ZCCHC14Q8WYQ9 949 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 PCED1BQ96HM7 432 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 FCRL2Q96LA5 508 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RDH12Q96NR8 316 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 LPIN3Q9BQK8 851 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 ZYG11BQ9C0D3 744 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 POLR1EQ9GZS1 481 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 SMOC2Q9H3U7 446 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 IL1RL2Q9HB29 575 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CATSPERZQ9NTU4 200 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 UBAP1Q9NZ09 502 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 TRMT6Q9UJA5 497 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 ANGPTL3Q9Y5C1 460 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 FADS3Q9Y5Q0 445 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CEPT1Q9Y6K0 416 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 TDRD15B5MCY1 1934 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 UBA6A0AVT1 1052 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 FAM72CH0Y354 149 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 H0YAE9 185 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 H3BSA7 217 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 STX16-NPEPL1H3BU86 382 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 KPNA4O00629 521 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RRP8O43159 456 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CACNG3O60359 315 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RPP40O75818 363 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 SEC24DO94855 1032 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 SORBS2O94875 1100 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 F2P00734 622 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CSRP1P21291 193 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CES1P23141 567 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 MSX2P35548 267 aaPredicted RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 GRIA2P42262 883 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RPS9P46781 194 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RFX4Q33E94 735 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RAB41Q5JT25 222 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 FAM72AQ5TYM5 149 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 FAM72DQ6L9T8 149 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CNSTQ6PJW8 725 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 AFTPHQ6ULP2 937 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CEP68Q76N32 757 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 FAM72BQ86X60 149 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 LSMEM2Q8N112 164 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 NPWQ8N729 165 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 NETO2Q8NC67 525 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 SPATA22Q8NHS9 363 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RHEBL1Q8TAI7 183 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 KLHL32Q96NJ5 620 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 SMOQ99835 787 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 SLC2A11Q9BYW1 496 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CLMPQ9H6B4 373 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 POLR1BQ9H9Y6 1135 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 CXorf21Q9HAI6 301 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 ARNT2Q9HBZ2 717 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 PREBQ9HCU5 417 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 TXNRD2Q9NNW7 524 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 HPS4Q9NQG7 708 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 BAG5Q9UL15 447 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 RIMKLBQ9ULI2 386 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 SH3GLB1Q9Y371 365 aa3.95□□□□□ -1.78
SCN1A-214ENST00000637038 TNPO3Q9Y5L0 923 aaKnown RBP3.95□□□□□ -1.78
SCN1A-214ENST00000637038 ALPK3Q96L96 1907 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms