RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CTPS1P17812 591 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 GPD1P21695 349 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 CAPZBP47756 277 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 CLCNKAP51800 687 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 PTSQ03393 145 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 SLC10A7Q0GE19 358 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 KCNAB1Q14722 419 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 LBRQ14739 615 aaKnown RBP17.86■□□□□ 0.45
CLN6-212ENST00000636020 LRRC66Q68CR7 880 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 USP45Q70EL2 814 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLN6-212ENST00000636020 TIGD1Q96MW7 591 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 NUDCD1Q96RS6 583 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 RIOK2Q9BVS4 552 aaKnown RBP17.86■□□□□ 0.45
CLN6-212ENST00000636020 CHST8Q9H2A9 424 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 NOD2Q9HC29 1040 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 WASH6PQ9NQA3 447 aa17.86■□□□□ 0.45
CLN6-212ENST00000636020 IGHV5-51A0A0C4DH38 117 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 PGLSO95336 258 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 CYP1A1P04798 512 aaPredicted RBP17.85■□□□□ 0.45
CLN6-212ENST00000636020 PTGER4P35408 488 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 AIF1P55008 147 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 RRADP55042 308 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 GPS2Q13227 327 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 IGFL3Q6UXB1 125 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 PHYKPLQ8IUZ5 450 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 ZBTB2Q8N680 514 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 AOPEPQ8N6M6 819 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 SLC30A5Q8TAD4 765 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 EPS8L1Q8TE68 723 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 C11orf70Q9BRQ4 267 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 RAB33BQ9H082 229 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 ILKAPQ9H0C8 392 aaPredicted RBP17.85■□□□□ 0.45
CLN6-212ENST00000636020 COPG2Q9UBF2 871 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 SNX7Q9UNH6 387 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 PIKFYVEQ9Y2I7 2098 aa17.85■□□□□ 0.45
CLN6-212ENST00000636020 DFFAO00273 331 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 CCP110O43303 1012 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 CPNE3O75131 537 aaKnown RBP17.84■□□□□ 0.45
CLN6-212ENST00000636020 RAB40ALP0C0E4 278 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 GLRBP48167 497 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 ACY1Q03154 408 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 PTP4A2Q12974 167 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 FAM69BQ5VUD6 431 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 LYPLAL1Q5VWZ2 237 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 LCN10Q6JVE6 187 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 IRGCQ6NXR0 463 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 SPNS3Q6ZMD2 512 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 KCNMB4Q86W47 210 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 PGBD5Q8N414 524 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 ENDOVQ8N8Q3 282 aaKnown RBP17.84■□□□□ 0.45
CLN6-212ENST00000636020 PIH1D2Q8WWB5 315 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 UBXN4Q92575 508 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 ZNF514Q96K75 400 aaPredicted RBP17.84■□□□□ 0.45
CLN6-212ENST00000636020 SMIM14Q96QK8 99 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 AGPAT4Q9NRZ5 378 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 FGF21Q9NSA1 209 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 TCFL5Q9UL49 500 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 PCDHGA10Q9Y5H3 936 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 SPG11Q96JI7 2443 aa17.84■□□□□ 0.45
CLN6-212ENST00000636020 GRID2O43424 1007 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 ART3Q13508 389 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 TRIM48Q8IWZ4 208 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 SLC38A9Q8NBW4 561 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 SLC20A1Q8WUM9 679 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 ZNF599Q96NL3 588 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 NLNQ9BYT8 704 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 CARD9Q9H257 536 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 NOCTQ9UK39 431 aaKnown RBP17.83■□□□□ 0.44
CLN6-212ENST00000636020 SIK3Q9Y2K2 1263 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 FHOD1Q9Y613 1164 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 PCSK5Q92824 1860 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 ABCA2Q9BZC7 2435 aa17.83■□□□□ 0.44
CLN6-212ENST00000636020 SEC16AO15027 2179 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 E2F3O00716 465 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 NUAK1O60285 661 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 SCRG1O75711 98 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 JCHAINP01591 159 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 EBLN1P0CF75 366 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 ZNF30P17039 623 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 HSPA9P38646 679 aaKnown RBP17.82■□□□□ 0.44
CLN6-212ENST00000636020 ZNF143P52747 638 aaPredicted RBP17.82■□□□□ 0.44
CLN6-212ENST00000636020 STC1P52823 247 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 GSCP56915 257 aaPredicted RBP17.82■□□□□ 0.44
CLN6-212ENST00000636020 PPP1CAP62136 330 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 ATP1A4Q13733 1029 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 ARMC12Q5T9G4 340 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 CERS6Q6ZMG9 384 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 Q6ZS92 163 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 CUZD1Q86UP6 607 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 ELOA2Q8IYF1 753 aaPredicted RBP17.82■□□□□ 0.44
CLN6-212ENST00000636020 NPWQ8N729 165 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 SGSM3Q96HU1 749 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 WDR24Q96S15 920 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 SELENOOQ9BVL4 669 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 NAA15Q9BXJ9 866 aaKnown RBP17.82■□□□□ 0.44
CLN6-212ENST00000636020 OSGEPL1Q9H4B0 414 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 KLC4Q9NSK0 619 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 GPATCH2LQ9NWQ4 482 aa17.82■□□□□ 0.44
CLN6-212ENST00000636020 KLF2Q9Y5W3 355 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms