RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 EGLN1Q9GZT9 426 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 SOX17Q9H6I2 414 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-213ENST00000630925 BCO1Q9HAY6 547 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 MMP25Q9NPA2 562 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 OLAHQ9NV23 265 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 ASNSD1Q9NWL6 643 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 ERAP1Q9NZ08 941 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 STK17AQ9UEE5 414 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 KCNN3Q9UGI6 736 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 SERGEFQ9UGK8 458 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 TTC7AQ9ULT0 858 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-213ENST00000630925 PCDHA7Q9UN72 937 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 SRPRBQ9Y5M8 271 aaKnown RBP4.84□□□□□ -1.63
SDCBP-213ENST00000630925 TRPM2O94759 1503 aa4.84□□□□□ -1.63
SDCBP-213ENST00000630925 TMEM120BA0PK00 339 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 HELTA6NFD8 242 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 ARHGAP42A6NI28 874 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 A6NL46 340 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 TEX22C9J3V5 150 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 RAB27BO00194 218 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 KCNAB3O43448 404 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 CELF2O95319 508 aaKnown RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 CD19P15391 556 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 ACHEP22303 614 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 MAOBP27338 520 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 SELENOVP59797 346 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 SLC6A3Q01959 620 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 ABHD18Q0P651 414 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 LSAMPQ13449 338 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 PON2Q15165 354 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 GRIK4Q16099 956 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF789Q5FWF6 425 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF311Q5JNZ3 666 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 SAPCD1Q5SSQ6 148 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 LCN1P1Q5VSP4 162 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 KRT79Q5XKE5 535 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 BRAT1Q6PJG6 821 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 GAREM2Q75VX8 874 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 TRILQ7L0X0 811 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 STX12Q86Y82 276 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 NRROSQ86YC3 692 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 CYP4X1Q8N118 509 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 ASCC1Q8N9N2 400 aaKnown RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 TRPV3Q8NET8 790 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 FLAD1Q8NFF5 587 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 RDM1Q8NG50 284 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 BBS10Q8TAM1 723 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF483Q8TF39 744 aaPredicted RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 PTPMT1Q8WUK0 201 aaPredicted RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 HMGB4Q8WW32 186 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 KLHL29Q96CT2 875 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 SLC41A3Q96GZ6 507 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 ELMO2Q96JJ3 720 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 TMX3Q96JJ7 454 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 C11orf70Q9BRQ4 267 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 CINPQ9BW66 212 aaPredicted RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 UPF3BQ9BZI7 483 aaKnown RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 DCLK3Q9C098 648 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 AKIRIN1Q9H9L7 192 aaPredicted RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 PAQR5Q9NXK6 330 aaPredicted RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 GDF2Q9UK05 429 aaPredicted RBP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 NIP7Q9Y221 180 aaKnown RBP eCLIP4.84□□□□□ -1.64
SDCBP-213ENST00000630925 RNF24Q9Y225 148 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 MFHAS1Q9Y4C4 1052 aa4.84□□□□□ -1.64
SDCBP-213ENST00000630925 NCAPD2Q15021 1401 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 KANK1Q14678 1352 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 A0A0U1RQJ8 604 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 A0A1B0GUA9 196 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 UBA6A0AVT1 1052 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-213ENST00000630925 TCAF2A6NFQ2 919 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 NPIPB13A6NJU9 1138 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 MEI4A8MW99 385 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 NPIPB4C9JG80 1138 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 H3BQV1 296 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 POLR1CO15160 346 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-213ENST00000630925 SSX5O60225 188 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 NOBOXO60393 691 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 PRSS23O95084 383 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 ZBTB7AO95365 584 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 ZNF888P0CJ79 500 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-213ENST00000630925 CALCBP10092 127 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 COX7A2P14406 83 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 EPHA1P21709 976 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 ACADSBP45954 432 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 HSPA13P48723 471 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 GALK1P51570 392 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 EEF1A1P68104 462 aaKnown RBP4.83□□□□□ -1.64
SDCBP-213ENST00000630925 EEF1A2Q05639 463 aaKnown RBP4.83□□□□□ -1.64
SDCBP-213ENST00000630925 GOLGA8DPQ0D2H9 430 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 POU4F2Q12837 409 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 SLAQ13239 276 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 KYAT1Q16773 422 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 HNRNPA1L2Q32P51 320 aaKnown RBP4.83□□□□□ -1.64
SDCBP-213ENST00000630925 Q5PR19 223 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 CLVS2Q5SYC1 327 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 EEF1A1P5Q5VTE0 462 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 SLC9A4Q6AI14 798 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 BLOC1S2Q6QNY1 142 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 RIPOR1Q6ZS17 1223 aa4.83□□□□□ -1.64
SDCBP-213ENST00000630925 MED25Q71SY5 747 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms