RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 FASTKD3Q14CZ7 662 aaKnown RBP12.73□□□□□ -0.37
SCN8A-209ENST00000627620 ZYG11AQ6WRX3 759 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 RBM44Q6ZP01 1051 aaKnown RBP12.73□□□□□ -0.37
SCN8A-209ENST00000627620 RALGPS2Q86X27 583 aaPredicted RBP12.73□□□□□ -0.37
SCN8A-209ENST00000627620 CIR1Q86X95 450 aaPredicted RBP12.73□□□□□ -0.37
SCN8A-209ENST00000627620 OR14C36Q8NHC7 312 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 SLC9A7Q96T83 725 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 CCDC28BQ9BUN5 200 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 TMEM138Q9NPI0 162 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 MIOSQ9NXC5 875 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 SEC14L3Q9UDX4 400 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 CIDEBQ9UHD4 219 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 PER2O15055 1255 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 LCA5LO95447 670 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 ZBTB11O95625 1053 aaPredicted RBP12.73□□□□□ -0.37
SCN8A-209ENST00000627620 ANKRD22Q5VYY1 191 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 MFSD5Q6N075 450 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 XAGE5Q8WWM1 108 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 NARS2Q96I59 477 aaKnown RBP12.73□□□□□ -0.37
SCN8A-209ENST00000627620 MAGEH1Q9H213 219 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 DNAJC28Q9NX36 388 aa12.73□□□□□ -0.37
SCN8A-209ENST00000627620 FPGTO14772 594 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 TP73O15350 636 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 ZBTB48P10074 688 aaPredicted RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 HOXB6P17509 224 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 CTSKP43235 329 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 ASMTP46597 345 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 OMPP47874 163 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 LIMK2P53671 638 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 PTPN5P54829 565 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 C2orf80Q0P641 193 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 RFTN2Q52LD8 501 aaPredicted RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 ADGRD1Q6QNK2 874 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 NPAS4Q8IUM7 802 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 PQLC1Q8N2U9 271 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 TFAP2BQ92481 460 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 FEM1CQ96JP0 617 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 WRAP53Q9BUR4 548 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 RSL24D1Q9UHA3 163 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 CNOT6Q9ULM6 557 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 FCF1Q9Y324 198 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 HAT1O14929 419 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 INSIG1O15503 277 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 C22orf31O95567 290 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 PBX3P40426 434 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 PTP4A2Q12974 167 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 AP3S1Q92572 193 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 MAF1Q9H063 256 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 FAM124BQ9H5Z6 455 aaPredicted RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 PSMD13Q9UNM6 376 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 IDH3BO43837 385 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 KHDRBS3O75525 346 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 HSPA7P48741 367 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 CLCQ05315 142 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 CLEC6AQ6EIG7 209 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 CLEC4DQ8WXI8 215 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 COQ7Q99807 217 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 RHOBTB2Q9BYZ6 727 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 COMMD9Q9P000 198 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 TRPS1Q9UHF7 1281 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 SNX10Q9Y5X0 201 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 GSC2O15499 205 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 SEPT4O43236 478 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 SSNA1O43805 119 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 ACAP2Q15057 778 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 VPS26BQ4G0F5 336 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 FBXO48Q5FWF7 155 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 IL23RQ5VWK5 629 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 LIN54Q6MZP7 749 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 ERICH5Q6P6B1 374 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 CLNKQ7Z7G1 428 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 HPS6Q86YV9 775 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 GALNT13Q8IUC8 556 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 CFAP206Q8IYR0 622 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 SLC43A3Q8NBI5 491 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 C7orf26Q96N11 449 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 C12orf65Q9H3J6 166 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 MYBPHLA2RUH7 354 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 FFAR2O15552 330 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 MTHFRP42898 656 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 TRAP1Q12931 704 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 ATAT1Q5SQI0 421 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 DCBLD1Q8N8Z6 715 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 DUS2Q9NX74 493 aaKnown RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 ZNF214Q9UL59 606 aaPredicted RBP12.72□□□□□ -0.37
SCN8A-209ENST00000627620 COLEC10Q9Y6Z7 277 aa12.72□□□□□ -0.37
SCN8A-209ENST00000627620 ANXA4P09525 319 aaPredicted RBP12.71□□□□□ -0.37
SCN8A-209ENST00000627620 TFPIP10646 304 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 CAPGP40121 348 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 NDST2P52849 883 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 QPRTQ15274 297 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 ARL13AQ5H913 290 aaPredicted RBP12.71□□□□□ -0.37
SCN8A-209ENST00000627620 LPCAT4Q643R3 524 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 SLC34A3Q8N130 599 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 ARL14EPQ8N8R7 260 aaPredicted RBP12.71□□□□□ -0.37
SCN8A-209ENST00000627620 FAM47BQ8NA70 645 aa12.71□□□□□ -0.37
SCN8A-209ENST00000627620 FLCNQ8NFG4 579 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms