RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 KRT35Q92764 455 aa4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 FBXO17Q96EF6 278 aa4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 RUNDC3BQ96NL0 473 aa4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 DACH2Q96NX9 599 aa4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 TWNKQ96RR1 684 aa4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 EDEM3Q9BZQ6 932 aa4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 STN1Q9H668 368 aaKnown RBP4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 HPS4Q9NQG7 708 aa4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 INTS10Q9NVR2 710 aaKnown RBP4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 COQ3Q9NZJ6 369 aa4.39□□□□□ -1.71
AC004943.3-201ENST00000624116 IGHV4OR15-8A0A075B7B6 117 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 PI4KAP2A4QPH2 592 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 KRT87PA6NCN2 255 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 SERINC4A6NH21 518 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 FMO6PO60774 539 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 PTP4A3O75365 173 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 ZNF254O75437 659 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 ADCY5O95622 1261 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 STAMBPO95630 424 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 RNF224P0DH78 156 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 PRLRP16471 622 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 ALOX12P18054 663 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 CRIP2P52943 208 aaPredicted RBP4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 PPP5CP53041 499 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 UBE3AQ05086 875 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 TBL3Q12788 808 aaKnown RBP4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 TSTQ16762 297 aaKnown RBP4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 IMMTQ16891 758 aaKnown RBP4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 FILIP1LQ4L180 1135 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 C1orf141Q5JVX7 400 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 TBC1D9BQ66K14 1250 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 GJB7Q6PEY0 223 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 INTS8Q75QN2 995 aaKnown RBP4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 TMEM110Q86TL2 294 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 LRRC49Q8IUZ0 686 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 CCDC65Q8IXS2 484 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 PGBD5Q8N414 524 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 CREB3L4Q8TEY5 395 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 SGCDQ92629 289 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 COG3Q96JB2 828 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 VPS39Q96JC1 886 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 MAELQ96JY0 434 aaKnown RBP4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 CABS1Q96KC9 395 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 PPP1R13BQ96KQ4 1090 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 C16orf45Q96MC5 204 aaPredicted RBP4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 EYA3Q99504 573 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 REEP2Q9BRK0 252 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 CRACR2AQ9BSW2 395 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 TTC12Q9H892 705 aaPredicted RBP4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 CRLF2Q9HC73 371 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 PDE7BQ9NP56 450 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 RPS6KA6Q9UK32 745 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 AP1M2Q9Y6Q5 423 aa4.38□□□□□ -1.71
AC004943.3-201ENST00000624116 hCG_1807616A0A1W2PRN6 198 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 C17orf100A8MU93 164 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 FAM72CH0Y354 149 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 SGK1O00141 431 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 UBE2CO00762 179 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 CEP104O60308 925 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 ERAL1O75616 437 aaKnown RBP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 VNN2O95498 520 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 MLYCDO95822 493 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 PAK4O96013 591 aaPredicted RBP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 ATP5BP06576 529 aaKnown RBP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 PDHBP11177 359 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 PCNAP12004 261 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 ZNF24P17028 368 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 MAPK3P27361 379 aaPredicted RBP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 MATR3P43243 847 aaKnown RBP eCLIP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 PTPN9P43378 593 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 SLC12A3P55017 1021 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 RELQ04864 619 aaPredicted RBP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 FAM27E3Q08E93 113 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 DHX34Q14147 1143 aaKnown RBP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 RBBP5Q15291 538 aaKnown RBP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 ZSCAN26Q16670 478 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 MAP3K21Q5TCX8 1036 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 FAM72AQ5TYM5 149 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 METTL11BQ5VVY1 283 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 PLEKHA7Q6IQ23 1121 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 FAM72DQ6L9T8 149 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 DCLRE1AQ6PJP8 1040 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 DENND5BQ6ZUT9 1274 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 FOXL2NBQ6ZUU3 175 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 KRT74Q7RTS7 529 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 MTERF4Q7Z6M4 381 aaKnown RBP4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 FAM72BQ86X60 149 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 AADATQ8N5Z0 425 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 WDSUB1Q8N9V3 476 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 KCTD6Q8NC69 237 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 SETD9Q8NE22 299 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 DNAAF1Q8NEP3 725 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 HSPH1Q92598 858 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 PTP4A1Q93096 173 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 ZUFSPQ96AP4 578 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 SCMH1Q96GD3 660 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 CD180Q99467 661 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 MSTO1Q9BUK6 570 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 TAOK3Q9H2K8 898 aa4.37□□□□□ -1.71
AC004943.3-201ENST00000624116 NCOR1P1Q9H4R4 102 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms