RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 LDLRAP1Q5SW96 308 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 MEI1Q5TIA1 1274 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 KCTD11Q693B1 232 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 AADACL2Q6P093 401 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 WASH2PQ6VEQ5 465 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 ARHGEF18Q6ZSZ5 1173 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 ADGRG6Q86SQ4 1221 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 DDHD1Q8NEL9 900 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 BLOC1S5Q8TDH9 187 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 SH3KBP1Q96B97 665 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 ZNF514Q96K75 400 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-217ENST00000624009 EPB41L1Q9H4G0 881 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 UCK1Q9HA47 277 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 WASH6PQ9NQA3 447 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 THSD1Q9NS62 852 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 ATXN10Q9UBB4 475 aa12.3□□□□□ -0.44
LINC00963-217ENST00000624009 DNMT3AQ9Y6K1 912 aaPredicted RBP12.3□□□□□ -0.44
LINC00963-217ENST00000624009 PIEZO2Q9H5I5 2752 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 TLN1Q9Y490 2541 aaKnown RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 GLYATL1P3A0A0U1RQE8 302 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 AGAP14A8MT82 685 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 HGSO14964 777 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 STX7O15400 261 aaKnown RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 RRP8O43159 456 aaKnown RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 CRTAMO95727 393 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 AGTP01019 485 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 ITGA2BP08514 1039 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 F3P13726 295 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 ZNF8P17098 575 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 VCLP18206 1134 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 HADHAP40939 763 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 EIF2S3P41091 472 aaKnown RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 CHRNA4P43681 627 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 EPHA4P54764 986 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 INHBCP55103 352 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 PCBP4P57723 403 aaKnown RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 RPS6KA1Q15418 735 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 TCEA2Q15560 299 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 OASLQ15646 514 aaKnown RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 ATP13A5Q4VNC0 1218 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 ALS2CLQ60I27 953 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 DRICH1Q6PGQ1 229 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 IYDQ6PHW0 289 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 CLEC14AQ86T13 490 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 LINC00523Q86TU6 105 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 LRRTM4Q86VH4 590 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 SLC25A41Q8N5S1 370 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 CCDC110Q8TBZ0 833 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 CCDC97Q96F63 343 aaPredicted RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 ATXN7L3BQ96GX2 97 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 SLC46A1Q96NT5 459 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 TBL1YQ9BQ87 522 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 FICDQ9BVA6 458 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 OR2AG1Q9H205 316 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 STN1Q9H668 368 aaKnown RBP12.29□□□□□ -0.44
LINC00963-217ENST00000624009 LRRC40Q9H9A6 602 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 ASCL3Q9NQ33 180 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 ACSL6Q9UKU0 697 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 RAXQ9Y2V3 346 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 PCDHGA7Q9Y5G6 932 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 ATMQ13315 3056 aa12.29□□□□□ -0.44
LINC00963-217ENST00000624009 CDRT15L2A8MXV6 281 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 CDK14O94921 469 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 ZNF7P17097 686 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 RBMS1P29558 406 aaKnown RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 MAZP56270 477 aaKnown RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 CCZ1BP86790 482 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 CCZ1P86791 482 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 DMPKQ09013 629 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 TMEM115Q12893 351 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 BIRC2Q13490 618 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 AGAP9Q5VTM2 703 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 DENND5AQ6IQ26 1287 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 MARK2Q7KZI7 788 aaKnown RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 CHST15Q7LFX5 561 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 SLC9B2Q86UD5 537 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 PIM3Q86V86 326 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 SLC13A5Q86YT5 568 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 SLITRK4Q8IW52 837 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 RBM12BQ8IXT5 1001 aaKnown RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 FAM71DQ8N9W8 422 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 ZNF248Q8NDW4 579 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 HEXDCQ8WVB3 486 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 MAIP1Q8WWC4 291 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 C10orf88Q9H8K7 445 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 TMPRSS11EQ9UL52 423 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 SATB2Q9UPW6 733 aa12.28□□□□□ -0.44
LINC00963-217ENST00000624009 R3HDM2Q9Y2K5 976 aaKnown RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 SMG1Q96Q15 3661 aaKnown RBP12.28□□□□□ -0.44
LINC00963-217ENST00000624009 H7C0S8 307 aa12.27□□□□□ -0.45
LINC00963-217ENST00000624009 GAPDHSO14556 408 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-217ENST00000624009 PLD2O14939 933 aa12.27□□□□□ -0.45
LINC00963-217ENST00000624009 PPM1DO15297 605 aa12.27□□□□□ -0.45
LINC00963-217ENST00000624009 B4GAT1O43505 415 aa12.27□□□□□ -0.45
LINC00963-217ENST00000624009 LIASO43766 372 aa12.27□□□□□ -0.45
LINC00963-217ENST00000624009 KRT37O76014 449 aa12.27□□□□□ -0.45
LINC00963-217ENST00000624009 AP2A1O95782 977 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms