RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 TWF1Q12792 350 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 PTPRRQ15256 657 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 RBBP7Q16576 425 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 COQ5Q5HYK3 327 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 UGT3A1Q6NUS8 523 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 CYP2R1Q6VVX0 501 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 SYVN1Q86TM6 617 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 STK40Q8N2I9 435 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 GALNT4Q8N4A0 578 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 MINDY1Q8N5J2 469 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 OR56A4Q8NGH8 313 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 EME1Q96AY2 570 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 SLCO4A1Q96BD0 722 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 FEM1AQ9BSK4 669 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 EFHD1Q9BUP0 239 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 PFDN4Q9NQP4 134 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 GID8Q9NWU2 228 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 SMPD4Q9NXE4 827 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 CD274Q9NZQ7 290 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 ABCD2Q9UBJ2 740 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 PKP3Q9Y446 797 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 TIMM22Q9Y584 194 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 PCDHB9Q9Y5E1 797 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 GPR45Q9Y5Y3 372 aa8.25□□□□□ -1.09
SND1-IT1-201ENST00000623342 TRIOO75962 3097 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 TYW5A2RUC4 315 aaKnown RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 ENO4A6NNW6 628 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 H0YJX3 145 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 GIPC1O14908 333 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 FZD6O60353 706 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 SOD2P04179 222 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 MRPL19P49406 292 aaKnown RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 HK3P52790 923 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 CCL23P55773 120 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 SMAD3P84022 425 aaKnown RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 ECT2LQ008S8 904 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 CACNG1Q06432 222 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 GRIK2Q13002 908 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 IRAK1BP1Q5VVH5 260 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 BLOC1S3Q6QNY0 202 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 CPNE9Q8IYJ1 553 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 HJURPQ8NCD3 748 aaPredicted RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 TSPEARQ8WU66 669 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZNF296Q8WUU4 475 aaPredicted RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 LRTOMTQ8WZ04 291 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZUFSPQ96AP4 578 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 LRCH3Q96II8 777 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZFRQ96KR1 1074 aaKnown RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 UHRF1Q96T88 793 aaPredicted RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 GPR63Q9BZJ6 419 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 IL1RL2Q9HB29 575 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 PIDD1Q9HB75 910 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 MAGEE1Q9HCI5 957 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 UBAP1Q9NZ09 502 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 IL17CQ9P0M4 197 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 FCF1Q9Y324 198 aaKnown RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZNF711Q9Y462 761 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 SLC30A1Q9Y6M5 507 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 CEP290O15078 2479 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 GOLGA8CPA6NN73 597 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 NME4O00746 187 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 CYBBP04839 570 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZNF26P17031 533 aaPredicted RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 PRDX3P30048 256 aaKnown RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 HMGCLP35914 325 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 CLCN7P51798 805 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 DIO3P55073 304 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 FOXM1Q08050 763 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 XKR7Q5GH72 579 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 PITRM1Q5JRX3 1037 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 GPRIN3Q6ZVF9 776 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 DNAJB7Q7Z6W7 309 aaPredicted RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 DEFB128Q7Z7B8 93 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 OR2T34Q8NGX1 318 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 OR2T3Q8NH03 318 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 CNBD2Q96M20 576 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 CCT7Q99832 543 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 TRIM15Q9C019 465 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 P2RY12Q9H244 342 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 SEMA6AQ9H2E6 1030 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 HIPK3Q9H422 1215 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 SARS2Q9NP81 518 aaKnown RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 AIG1Q9NVV5 245 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 NUDT4Q9NZJ9 180 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 EIF2B4Q9UI10 523 aaKnown RBP8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 VPS51Q9UID3 782 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 ZNF225Q9UK10 706 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 PCDHB1Q9Y5F3 818 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 OR51B4Q9Y5P0 310 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 SNX13Q9Y5W8 968 aa8.24□□□□□ -1.09
SND1-IT1-201ENST00000623342 A0A0U1RQS6 177 aa8.23□□□□□ -1.09
SND1-IT1-201ENST00000623342 A0A1W2PP18 115 aa8.23□□□□□ -1.09
SND1-IT1-201ENST00000623342 C9JVG2 144 aa8.23□□□□□ -1.09
SND1-IT1-201ENST00000623342 FXYD1O00168 92 aa8.23□□□□□ -1.09
SND1-IT1-201ENST00000623342 E2F3O00716 465 aa8.23□□□□□ -1.09
SND1-IT1-201ENST00000623342 PRRG1O14668 218 aa8.23□□□□□ -1.09
SND1-IT1-201ENST00000623342 PRMT5O14744 637 aaPredicted RBP8.23□□□□□ -1.09
SND1-IT1-201ENST00000623342 CSPG5O95196 566 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms