RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 OSBPL9Q96SU4 736 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 AP1M1Q9BXS5 423 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 ASB8Q9H765 288 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 LRIT1Q9P2V4 623 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 SCN8AQ9UQD0 1980 aa13.81□□□□□ -0.2
PCDHGC3-208ENST00000622836 ASXL3Q9C0F0 2248 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 ARHGEF17Q96PE2 2063 aaPredicted RBP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 TRBV23OR9-2A0A075B6M9 112 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 GOLGA6L10A0A0M3HER8 536 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCDC78A2IDD5 438 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 KMOO15229 486 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZW10O43264 779 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 NUDT21O43809 227 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 SRP72O76094 671 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 RPLP0P05388 317 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 SLC2A4P14672 509 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 MSH3P20585 1137 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 ITGALP20701 1170 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZNF140P52738 457 aaPredicted RBP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 GNG11P61952 73 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 TMEM115Q12893 351 aaPredicted RBP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 SEMA5AQ13591 1074 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 HLTFQ14527 1009 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 CERCAMQ5T4B2 595 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 GPRC6AQ5T6X5 926 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 RBM44Q6ZP01 1051 aaKnown RBP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 PRELID2Q8N945 189 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 WDR48Q8TAF3 677 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 COG1Q8WTW3 980 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 PATE1Q8WXA2 126 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 KLC4Q9NSK0 619 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 CRLS1Q9UJA2 301 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 PYCARDQ9ULZ3 195 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 DNAJC16Q9Y2G8 782 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 PCYT1BQ9Y5K3 369 aaPredicted RBP13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 ST14Q9Y5Y6 855 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 SLC30A1Q9Y6M5 507 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 RNF215Q9Y6U7 377 aa13.8□□□□□ -0.2
PCDHGC3-208ENST00000622836 RP1P56715 2156 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 TRABD2BA6NFA1 517 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCL22O00626 93 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 GAPDHSO14556 408 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 CHUKO15111 745 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 LDB2O43679 373 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 CSO75390 466 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZNF7P17097 686 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 VCLP18206 1134 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 MC4RP32245 332 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 VPS41P49754 854 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 TERF1P54274 439 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCL7P80098 99 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 MSLNQ13421 630 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 NFATC2Q13469 925 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 LAMB3Q13751 1172 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 TRIP13Q15645 432 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 KHDC1Q4VXA5 237 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCDC38Q502W7 563 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCNJLQ8IV13 435 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 NAGSQ8N159 534 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 ARL14Q8N4G2 192 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 DCBLD1Q8N8Z6 715 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 DDHD1Q8NEL9 900 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 ULK4Q96C45 1275 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 NXPE2Q96DL1 559 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 DCUN1D1Q96GG9 259 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 DNAJC1Q96KC8 554 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 GFM1Q96RP9 751 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZMYND15Q9H091 742 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 STN1Q9H668 368 aaKnown RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 SMOXQ9NWM0 555 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 SMARCAL1Q9NZC9 954 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 RABGEF1Q9UJ41 708 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 TMPRSS11EQ9UL52 423 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 TTC7AQ9ULT0 858 aaPredicted RBP13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 AK5Q9Y6K8 562 aa13.79□□□□□ -0.2
PCDHGC3-208ENST00000622836 FRYQ5TBA9 3013 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 IGF2RP11717 2491 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 HEATR9A2RTY3 570 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 TMEM8BA6NDV4 472 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 OR2AG2A6NM03 316 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 TCEA3O75764 348 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 SUN1O94901 812 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 PROS1P07225 676 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 RALBP11234 206 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 PNLIPP16233 465 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 TCP1P17987 556 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 ALDH4A1P30038 563 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 GRIA1P42261 906 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 SKIDA1Q1XH10 827 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 AMZ1Q400G9 498 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 ZRANB3Q5FWF4 1079 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 CDCP2Q5VXM1 449 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 CCDC137Q6PK04 289 aaKnown RBP13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 DET1Q7L5Y6 550 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 TAS2R42Q7RTR8 314 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 SNX20Q7Z614 316 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 CACTIN-AS1Q8N1I8 211 aa13.78□□□□□ -0.2
PCDHGC3-208ENST00000622836 RASGEF1AQ8N9B8 481 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms