RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 IPPQ9Y573 584 aa7.46□□□□□ -1.22
TRIM49B-202ENST00000622138 PCDHGB1Q9Y5G3 927 aa7.46□□□□□ -1.22
TRIM49B-202ENST00000622138 IGKV6-21A0A0C4DH24 114 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 DHRS12A0PJE2 317 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 KRT87PA6NCN2 255 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 LACTBL1A8MY62 500 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 KPNA7A9QM74 516 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 F5H423 210 aaPredicted RBP7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 NFKBIEO00221 500 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 SRP72O76094 671 aaKnown RBP7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 SEMA3DO95025 777 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 GPIP06744 558 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 ACADMP11310 421 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 HOXB3P14651 431 aaPredicted RBP7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 ZNF30P17039 623 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 EDNRBP24530 442 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 DNAJB1P25685 340 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 ELK4P28324 431 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 AXLP30530 894 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 RPL9P32969 192 aaKnown RBP7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 EPHX2P34913 555 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 AP1S2P56377 157 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 MBTD1Q05BQ5 628 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TNK1Q13470 666 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 MFSD10Q14728 455 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 HSDL1Q3SXM5 330 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TMEM236Q5W0B7 351 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 FAM160B1Q5W0V3 765 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 SEL1L3Q68CR1 1132 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TIGD3Q6B0B8 471 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 FAM45BPQ6NSW5 357 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 DLK2Q6UY11 383 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 ZNF704Q6ZNC4 412 aaPredicted RBP7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 BEND5Q7L4P6 421 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 LIMS2Q7Z4I7 341 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 PRSS42Q7Z5A4 293 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 THAP5Q7Z6K1 395 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 P2RY8Q86VZ1 359 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 RAB43Q86YS6 212 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 ZBTB8OSQ8IWT0 167 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 PM20D2Q8IYS1 436 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TCTE3Q8IZS6 198 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TP53I13Q8NBR0 393 aaPredicted RBP7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 DNERQ8NFT8 737 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 VANGL1Q8TAA9 524 aaPredicted RBP7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 PCDH19Q8TAB3 1148 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 SLC22A8Q8TCC7 542 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 FAM45AQ8TCE6 357 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 SLC7A6Q92536 515 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TESCQ96BS2 214 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TMCO6Q96DC7 493 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 RTP4Q96DX8 246 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 YIPF6Q96EC8 236 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TMEM176AQ96HP8 235 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 B3GALT6Q96L58 329 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 HSFY1Q96LI6 401 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 RDH12Q96NR8 316 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 RNF157Q96PX1 679 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 NPAS2Q99743 824 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 DGCR6LQ9BY27 220 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 SLC6A17Q9H1V8 727 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 FZD8Q9H461 694 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 EPS8L2Q9H6S3 715 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 NIPAL2Q9H841 368 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 EMC3Q9P0I2 261 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 KIF17Q9P2E2 1029 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TEKT2Q9UIF3 430 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 AP4E1Q9UPM8 1137 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 CDYLQ9Y232 598 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 TLR6Q9Y2C9 796 aa7.45□□□□□ -1.22
TRIM49B-202ENST00000622138 SLC15A5A6NIM6 579 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 METTL15A6NJ78 407 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ACKR2O00590 384 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 SOCS7O14512 581 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PLD2O14939 933 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 KPNA6O60684 536 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 RNGTTO60942 597 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CPNE3O75131 537 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 XYLBO75191 536 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 TRIM3O75382 744 aaPredicted RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 METTL18O95568 372 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 APRTP07741 180 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PDGFRAP16234 1089 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 OSBPP22059 807 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 PCMT1P22061 227 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 FMO4P31512 558 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 GMPRP36959 345 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 APLP1P51693 650 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 TEKQ02763 1124 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 EPS8Q12929 822 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 GALEQ14376 348 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 SURF1Q15526 300 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 SMAD1Q15797 465 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 UGP2Q16851 508 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 ZNF404Q494X3 552 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 GPAT3Q53EU6 434 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 HABP4Q5JVS0 413 aaKnown RBP7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 CACHD1Q5VU97 1274 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 DCAF15Q66K64 600 aa7.44□□□□□ -1.22
TRIM49B-202ENST00000622138 OR6B2Q6IFH4 312 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms