RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 EME1Q96AY2 570 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 LRRC58Q96CX6 371 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 LRCH3Q96II8 777 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 MRPS26Q9BYN8 205 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 TRIM54Q9BYV2 358 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 SEMA4BQ9NPR2 832 aaPredicted RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 GKN1Q9NS71 199 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 CCM2LQ9NUG4 571 aaPredicted RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 TRPM5Q9NZQ8 1165 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 DNMT3BQ9UBC3 853 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 TRMT6Q9UJA5 497 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 CNOT6Q9ULM6 557 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 PCDHA9Q9Y5H5 950 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 OR51B4Q9Y5P0 310 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 A0A1W2PP18 115 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 C7orf72A4D263 438 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 ANGPT2O15123 496 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 NIPSNAP2O75323 286 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 CYBBP04839 570 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 TFAP2AP05549 437 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 ATP6V1B2P21281 511 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 GSTT1P30711 240 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 RPL5P46777 297 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 CLCN7P51798 805 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 IL2P60568 153 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 NAIF1Q69YI7 327 aaPredicted RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 CWF19L1Q69YN2 538 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 REM2Q8IYK8 340 aaPredicted RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 SIDT2Q8NBJ9 832 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 CD99L2Q8TCZ2 262 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 WBP2Q969T9 261 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 ZFRQ96KR1 1074 aaKnown RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 ZNF382Q96SR6 550 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 CLSTN3Q9BQT9 956 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 HMX1Q9NP08 348 aaPredicted RBP9.35□□□□□ -0.91
PDPN-212ENST00000621990 GID8Q9NWU2 228 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 BTRCQ9Y297 605 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 MICAL3Q7RTP6 2002 aa9.35□□□□□ -0.91
PDPN-212ENST00000621990 OBSL1O75147 1896 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 ASPDHA6ND91 283 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 GREM1O60565 184 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 EEDO75530 441 aaKnown RBP9.34□□□□□ -0.91
PDPN-212ENST00000621990 C1RP00736 705 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 GNRH1P01148 92 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 CXCL10P02778 98 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 RPL17P18621 184 aaKnown RBP9.34□□□□□ -0.91
PDPN-212ENST00000621990 PRDX3P30048 256 aaKnown RBP9.34□□□□□ -0.91
PDPN-212ENST00000621990 AGTR2P50052 363 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 GK3PQ14409 553 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 FXNQ16595 210 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 PDCD4Q53EL6 469 aaKnown RBP9.34□□□□□ -0.91
PDPN-212ENST00000621990 TPGS2Q68CL5 300 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 SATL1Q86VE3 508 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 CARM1Q86X55 608 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 PTRH1Q86Y79 214 aaKnown RBP9.34□□□□□ -0.91
PDPN-212ENST00000621990 STK40Q8N2I9 435 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 CHCHD4Q8N4Q1 142 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 ZNF461Q8TAF7 563 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 EEF1AKMT1Q8WVE0 214 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 LINGO1Q96FE5 620 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 OSBPL11Q9BXB4 747 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 TRIM15Q9C019 465 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 MUC3BQ9H195 1237 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 MUC13Q9H3R2 512 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 COQ10BQ9H8M1 238 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 MAGEE1Q9HCI5 957 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 CMTM6Q9NX76 183 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 IL17CQ9P0M4 197 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 ACTR3BQ9P1U1 418 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 LZTS1Q9Y250 596 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 COMMD3-BMI1R4GMX3 469 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 C2orf78A6NCI8 922 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 GRXCR2A6NFK2 248 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 STX7O15400 261 aaKnown RBP9.34□□□□□ -0.91
PDPN-212ENST00000621990 FAM58BPP0C7Q3 252 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 HMGCLP35914 325 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 DIO3P55073 304 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 CACNG1Q06432 222 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 MTX3Q5HYI7 312 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 UGT3A1Q6NUS8 523 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 CYP2R1Q6VVX0 501 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 GPSM1Q86YR5 675 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 GALNT4Q8N4A0 578 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 OR56A4Q8NGH8 313 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 NAT14Q8WUY8 206 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 EID2BQ96D98 161 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 ALG14Q96F25 216 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 CNBD2Q96M20 576 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 PLEKHG4BQ96PX9 1271 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 FEM1AQ9BSK4 669 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 HGH1Q9BTY7 390 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 PFDN4Q9NQP4 134 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 NUDT4Q9NZJ9 180 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 GMPR2Q9P2T1 348 aaKnown RBP9.34□□□□□ -0.91
PDPN-212ENST00000621990 SNX13Q9Y5W8 968 aa9.34□□□□□ -0.91
PDPN-212ENST00000621990 SNAP91O60641 907 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 CLPTM1O96005 669 aa9.33□□□□□ -0.92
PDPN-212ENST00000621990 CHEK2O96017 543 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms